LOCUS       NM_001398957            2017 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus GLI pathogenesis-related 2 (Glipr2), mRNA.
ACCESSION   NM_001398957 XM_001054584
VERSION     NM_001398957.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Sahni S, Krisp C, Molloy MP, Nahm C, Maloney S, Gillson J, Gill AJ,
            Samra J and Mittal A.
  TITLE     PSMD11, PTPRM and PTPRB as novel biomarkers of pancreatic cancer
            progression
  JOURNAL   Biochim Biophys Acta Gen Subj 1864 (11), 129682 (2020)
   PUBMED   32663515
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Huang S, Liu F, Niu Q, Li Y, Liu C, Zhang L, Ni D and Pu X.
  TITLE     GLIPR-2 overexpression in HK-2 cells promotes cell EMT and
            migration through ERK1/2 activation
  JOURNAL   PLoS One 8 (3), e58574 (2013)
   PUBMED   23516513
REFERENCE   3  (bases 1 to 2017)
  AUTHORS   Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta
            R, Wang NS and Knepper MA.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   4  (bases 1 to 2017)
  AUTHORS   Kang D, Oh S, Ahn SM, Lee BH and Moon MH.
  TITLE     Proteomic analysis of exosomes from human neural stem cells by flow
            field-flow fractionation and nanoflow liquid chromatography-tandem
            mass spectrometry
  JOURNAL   J Proteome Res 7 (8), 3475-3480 (2008)
   PUBMED   18570454
REFERENCE   5  (bases 1 to 2017)
  AUTHORS   Serrano RL, Kuhn A, Hendricks A, Helms JB, Sinning I and Groves MR.
  TITLE     Structural analysis of the human Golgi-associated plant
            pathogenesis related protein GAPR-1 implicates dimerization as a
            regulatory mechanism
  JOURNAL   J Mol Biol 339 (1), 173-183 (2004)
   PUBMED   15123429
REFERENCE   6  (bases 1 to 2017)
  AUTHORS   Eberle HB, Serrano RL, Fullekrug J, Schlosser A, Lehmann WD,
            Lottspeich F, Kaloyanova D, Wieland FT and Helms JB.
  TITLE     Identification and characterization of a novel human plant
            pathogenesis-related protein that localizes to lipid-enriched
            microdomains in the Golgi complex
  JOURNAL   J Cell Sci 115 (Pt 4), 827-838 (2002)
   PUBMED   11865038
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000161.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001398957.2.
            
            On Dec 28, 2021 this sequence version replaced XM_001054584.7.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB605723.1, SRR8487227.132437.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-82                JACYVU010000161.1  33605768-33605849
            83-191              JACYVU010000161.1  33616319-33616427
            192-295             JACYVU010000161.1  33616778-33616881
            296-373             JACYVU010000161.1  33618509-33618586
            374-2017            JACYVU010000161.1  33624744-33626387
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q22"
     gene            1..2017
                     /gene="Glipr2"
                     /note="GLI pathogenesis-related 2"
                     /db_xref="GeneID:679819"
                     /db_xref="RGD:1583669"
     exon            1..82
                     /gene="Glipr2"
                     /inference="alignment:Splign:2.1.0"
     CDS             70..534
                     /gene="Glipr2"
                     /codon_start=1
                     /product="Golgi-associated plant pathogenesis-related
                     protein 1"
                     /protein_id="NP_001385886.1"
                     /db_xref="GeneID:679819"
                     /db_xref="RGD:1583669"
                     /translation="MGKSASKQFNNEVLKAHNEYRAKHGVPPLKLCKKLNQEAQQYSE
                     ALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYSEIKSYNFQQPGFTSGTG
                     HFTAMVWKNTKKIGVGKASASDGSSFVVARYFPAGNIVNQGFFEENVPPPKK"
     exon            83..191
                     /gene="Glipr2"
                     /inference="alignment:Splign:2.1.0"
     exon            192..295
                     /gene="Glipr2"
                     /inference="alignment:Splign:2.1.0"
     exon            296..373
                     /gene="Glipr2"
                     /inference="alignment:Splign:2.1.0"
     exon            374..2017
                     /gene="Glipr2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgctgagacc cgctaccctg cgcagcgcag cggagccaca gcggagccga ggagcgcaca
       61 cagcaggcca tgggcaaatc agcttccaaa cagtttaata atgaggtcct gaaggcccac
      121 aacgagtacc gggccaagca tggtgtcccg ccactgaagc tctgtaagaa gctcaaccag
      181 gaagctcagc agtattcaga agccctggcc agcacaagaa ttctcaaaca cagcccagag
      241 tccagtcgtg gccagtgtgg ggagaacctt gcatgggcat cctacgatca gacaggaaag
      301 gaagtggctg acaggtggta cagtgaaatc aagagctaca acttccagca gccgggtttc
      361 acctcaggga ccggccactt cacagccatg gtgtggaaga ataccaagaa gataggcgtg
      421 gggaaggcgt ctgcgagtga cgggtcctcc tttgtggtag ccagatactt tccagcgggg
      481 aatattgtca accagggctt ctttgaagag aatgtcccac ctccaaagaa gtaactaaca
      541 ccaccaaacg taatgagatg gagacgcatt taccaagtgc ctgttgaacc acaaaaagcc
      601 aggaagtgtc tgtccctggg gtgtatgtac ttctgtgttt acctgtgagc atctcctgtg
      661 acagctgcac ttgagctcat tctgattaaa ggaggggcat ccgaaacatt tatccagaag
      721 gttagctaga ccgtaattac tcagactacg taagattaat tctgatatct tttttctggt
      781 tttagtttag ttttttgttt tttgtttttt gttttttgtt ttttttgttt tttttttttt
      841 tgtttttttt ttttttttgt ttcaaggcaa agtttctcag tgtagccttg gctgtcctgg
      901 aatttgctct gcagaccagg ctggcctcga actcagagaa ctgcctgtgc ctggtttttt
      961 tttttttttt tttttctgtt tttttggttt ttgttttttt ttctttttct tttttctgtt
     1021 atttttaaag cagacttcat ctgaaacgtt cttgcttcta atgtccatcc ctggactttg
     1081 tgtgtgctga atatttgccg tcctgagaag tgaggtcctt tcatgcgctc ttcctgtgtt
     1141 gtaatctttt tggtagatat tgaagctatc aaaacgtcct ttggatgtga cataatgcag
     1201 cttgcattag aaatatgtgg ccagctgcat tttacaggat cagtgagatt tctcattctc
     1261 agtcggaaga catgatatca ccctgcatcc tccgggattc cctaatggaa ttgccaaaaa
     1321 gcaaatgaag gaaaaaggag ccttagagcc ttgaaatttt tcaaccttta aagagcaaat
     1381 actacagcca ctattttgtt ttgttttgtt tttgtttttg tttttgtttc taagtttcag
     1441 tgctcacagc tccactttgg cctctggggg gcggggctgg gtctggaatg cagcccatcc
     1501 cccactctca acgaggcggc cgtcccgctg cctgggctct tggccaaagc cttggaccac
     1561 gaagtcagta gagcagaagc ttcagttggg ggccctggag gaagccccac ggccagtatc
     1621 cttccccaac cctgcaggcg gtgaccaccc aggcccgtcc cgcggcagct gtggttgtta
     1681 cagcggcgcc ttggcttctt cccggaatgt gttacaagcc caaatgcccc cgggaggagg
     1741 cccaaacaag attaggaacg ctaatttgat cctgtgtttt gcctcaaact agacacagtt
     1801 ccctcagaag agctgattaa ccaggtccac cggggagaga ccaactgcag atccctgaac
     1861 tggtggtatc tccttctgca aggcgataaa ggggtggttg gcctaaatga cagcaaggct
     1921 ggctggtctt tgttacactg tgaacagtcc cgcactgcgc cacttggttc atccagggat
     1981 agcgactaac gagacaataa aaaaatcctt tcctttt
//
