LOCUS       NM_001177442            2452 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus glucocorticoid induced 1 (Glcci1), mRNA.
ACCESSION   NM_001177442 XM_002729282 XM_002729283
VERSION     NM_001177442.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Kim,S.H., Kim,H.J. and Kim,C.W.
  TITLE     GLCCI1 is a novel component associated with the PI3K signaling
            pathway in podocyte foot processes
  JOURNAL   Exp Mol Med 48 (5), e233 (2016)
   PUBMED   27174202
  REMARK    GeneRIF: GLCCI1 is a novel component associated with the PI3K
            signaling pathway in podocyte foot processes
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Miazek,A. and Malissen,B.
  TITLE     Two genes, three messengers: hybrid transcript between a gene
            expressed at specific stages of T-cell and sperm maturation and an
            unrelated adjacent gene
  JOURNAL   Immunogenetics 54 (10), 681-692 (2003)
   PUBMED   12557054
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473959.1.
            
            On or before May 13, 2010 this sequence version replaced
            XM_002729282.1, XM_002729283.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC166806.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMD00132261, SAMD00132264 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q21"
     gene            1..2452
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /note="glucocorticoid induced 1"
                     /db_xref="GeneID:296884"
                     /db_xref="RGD:1563612"
     exon            1..81
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     exon            82..181
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     exon            182..243
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     exon            244..458
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     CDS             350..1642
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /note="glucocorticoid induced transcript 1"
                     /codon_start=1
                     /product="glucocorticoid-induced transcript 1 protein"
                     /protein_id="NP_001170913.1"
                     /db_xref="GeneID:296884"
                     /db_xref="RGD:1563612"
                     /translation="MCRSPWPHMCWQRRASSVTFLTTYCPTMLATTCPDSVDRPKSQQ
                     IRNSSTIRRTSSLDTITGPYLTGQWPRDPHVHYPSCMKDKATQTPSCWAEEGAEKRSH
                     QRSASWGSADQLKEIAKLRQQLQRSKQSSRHSREKDRQSPLHGNHIPISHTQAIGSRS
                     VPMPLSNISVPKSSVSRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLP
                     AHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKD
                     SGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNKV
                     NFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSDD
                     TSTADSLEPSVQQPSQQQQLLQDLQAEEHISTQNYVMI"
     exon            459..610
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     exon            611..697
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     exon            698..811
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     exon            812..964
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     exon            965..1175
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     exon            1176..1296
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
     exon            1297..2452
                     /gene="Glcci1"
                     /gene_synonym="RGD1563612"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccaaacgttg acttgacccc ggaagtaggc tgaaggaccg ggcgagcggc aagctacggg
       61 cagcggcgga cggactctca gatagcatcg gcagcggcta tgtttcactt cttccgaaag
      121 cctgcagaat ccaaaaagcc ctccgtgccg gaaccggaag ccgatggatt tgtcctctta
      181 ggagatacag ccaatgaagt gagatgcaaa acttccgaag cagaaggcag ccagtcttcg
      241 gagaccggca aagaagacac atccagtgtg actgtatcag gccccgagac aggaaaccag
      301 gcaggccaga ctccagagaa caactcacta acagccgagc tcctgagcga tgtgccgttc
      361 accctggccc cacatgtgct ggcagcgcag ggcatcatca gtgaccttcc tgaccactta
      421 ctgtcccacg atgttggcga caacttgtcc cgattctgtg gacagaccaa aatctcagca
      481 aattcgaaac tctagtacaa taaggcgaac ctcttctttg gatacgataa caggacctta
      541 cctcacagga cagtggccac gtgaccctca tgttcactac ccttcgtgca tgaaagataa
      601 agcgactcag acacctagct gttgggcaga ggagggagca gaaaaacgat cacatcagcg
      661 ctctgcgtca tggggaagtg ctgatcaact gaaagagatt gccaaactca ggcagcagtt
      721 acagcgcagc aagcagagca gtcggcacag tagagagaaa gatcgacagt cacctctcca
      781 tggcaaccac ataccgatca gtcatactca ggctattggg tccaggtcag tccctatgcc
      841 tctgtcaaac atatccgtgc caaaatcctc tgtttcccgt gtgccctgca atgtagaagg
      901 gataagtcct gaactggaaa aggtattcat caaagaaaac aatgggaagg aagaagtatc
      961 caagccgttg gatataccag atggtcgaag agccccgctc cctgcgcact acaggagcag
     1021 tagtacccga agcatagata cccagacacc ttctgtccaa gagcgcagca gtagctgcag
     1081 cagccactcc ccttgtgtgt ccccattttg tcctccggaa tcccaggatg gaagtccttg
     1141 ttcaacagaa gatttgctgt atgatcgtga taaagacagt gggagtagct caccgttacc
     1201 caagtatgct tcatctccca aaccaaacaa cagctacatg ttcaaacggg agcccccaga
     1261 gggatgtgag cgagtgaagg tctttgagga aatggcgtct cgtcagccta tctcggcccc
     1321 tctcttttca tgtcctgaca aaaacaaggt taatttcatc ccaaccggat cagctttctg
     1381 tcctgtaaaa cttctaggcc ctctcttacc tgcctctgac ctgatgctca agaactctcc
     1441 taattctggc cagagctcag ctctggccac actaaccgta gagcagctct cctcccgggt
     1501 ctccttcacg tccctttctg atgacaccag caccgcagac tccctggagc cctctgtcca
     1561 gcagccatct cagcagcagc agctcctgca ggatttgcag gcagaggaac acatctccac
     1621 tcagaactat gtgatgatct aaagcagagg gggagctggc ctccgcccat gttccatgga
     1681 tcgggaatga gatctcagac atctatctgc atggagtgac aaactttctg aacaccacca
     1741 ccaacagcaa aatacttagc atcataaaat agctattaac actgatcttg gcagggaccg
     1801 acttctattc agcagttttt gtggaaagca gtaatgcttg caaaaatgtg tgtgtcattc
     1861 agcatttaag tggagactat gcatttcata gtatgtctga cagactagta ctgtgtcctg
     1921 tgttttgttc caaatttttc agtatgaata agctctactt caaaaagttg cctgtctaag
     1981 tagaaaatgt cttgctgtgt tttgtcctat ggaaaatact gtacttcagg attatgttta
     2041 caattgatcc aggtgtttgt ttctaacttc tataatacat acaatgcaaa aaaaaaaatg
     2101 gccacaacag ttgcacagtg cccaccctat ggcctagctt caggtacttc agttgaagtc
     2161 taaactcagg taacttggaa tgtatgtcat attgggatag taaatatttc acagctacca
     2221 agctgaagag agaacatcac tctttgcctt tccttatttt ctgcatttcc ttttcttcat
     2281 tccattccac attagactaa gaagtgcatt catccctagg agatggtaat cctggatatg
     2341 gggaccatga ggagaaccag caaatctgtg gtgtgtgaca tcacttttgt catgtggtta
     2401 ccagtagaac aactgttgca ttcactgttt caacatgtgt aaatgtggct tt
//
