LOCUS       NM_001192018            2436 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus galactosidase, beta 1-like 2 (Glb1l2), mRNA.
ACCESSION   NM_001192018 XM_578717
VERSION     NM_001192018.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            [WARNING] On Mar 14, 2025 this sequence was replaced by
            NM_001192018.2.
            
            On Jul 17, 2010 this sequence version replaced XM_578717.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.1978458.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                JAXUCZ010000008.1  33442384-33442469   c
            87-134              JAXUCZ010000008.1  33432672-33432719   c
            135-332             JAXUCZ010000008.1  33432033-33432230   c
            333-401             JAXUCZ010000008.1  33430296-33430364   c
            402-497             JAXUCZ010000008.1  33429601-33429696   c
            498-606             JAXUCZ010000008.1  33427276-33427384   c
            607-699             JAXUCZ010000008.1  33415421-33415513   c
            700-781             JAXUCZ010000008.1  33412669-33412750   c
            782-852             JAXUCZ010000008.1  33402492-33402562   c
            853-937             JAXUCZ010000008.1  33400046-33400130   c
            938-1075            JAXUCZ010000008.1  33398755-33398892   c
            1076-1156           JAXUCZ010000008.1  33398103-33398183   c
            1157-1263           JAXUCZ010000008.1  33397502-33397608   c
            1264-1404           JAXUCZ010000008.1  33396800-33396940   c
            1405-1476           JAXUCZ010000008.1  33396496-33396567   c
            1477-1555           JAXUCZ010000008.1  33396178-33396256   c
            1556-1643           JAXUCZ010000008.1  33395117-33395204   c
            1644-1755           JAXUCZ010000008.1  33394725-33394836   c
            1756-1872           JAXUCZ010000008.1  33394238-33394354   c
            1873-2436           JAXUCZ010000008.1  33393383-33393946   c
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..2436
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /note="galactosidase, beta 1-like 2"
                     /db_xref="GeneID:503194"
                     /db_xref="RGD:1564436"
     CDS             1..1959
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /EC_number="3.2.1.23"
                     /codon_start=1
                     /product="beta-galactosidase-1-like protein 2"
                     /protein_id="NP_001178947.1"
                     /db_xref="GeneID:503194"
                     /db_xref="RGD:1564436"
                     /translation="MPKWSLRRRPGRTLGLLLLLVLSFLVLRRYLNPKVGSCDREGAL
                     RLNWTSVLPLWLQRQRLGLRTKGPNFMLEDSTFQILGGSIHYFRVPREYWRDRLLKLK
                     ACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFIWLAAKIGLWVILRPGPYICSEID
                     LGGLPSWLLQDPDMKLRTTYPGFTKAVDLYFDHLMSRVVPLQYKHGGPIIAVQVENEY
                     GSYNGDHAYMPYIKKALEDRGIIEMLLTSDNKDGLEKGVVDGVLATINLQSQQELVAL
                     NSILLSIQGIQPKMVMEYWTGWFDSWGGSHNILDSSEVLQTVSAIIKDGSSINLYMFH
                     GGTNFGFINGAMHFGDYKADVTSYDYDAILTEAGDYTAKYTKLRELFGTFSGVPPPPP
                     PELTAKMVYEPVTPSFYLSLWDALLYMDKPITSEIPINMENLPVNNGNGQAFGYVLYE
                     TTIFSSGVLSGLVRDRGQVFLNRVSIGFLDYTTTKITIPLTQGYTILRILVENRGRVN
                     YGNNIDSQRKGLIGNLYLNNKPLKNFKIYSLDMTKQFFQRFDMDKWSVVPKEITFPAF
                     FLGTLSVGIYPSDTFLKLEGWVKGVVLVNDHNLGRYWNVGPQETLYLPGVWLDKGLNK
                     VIIFEETMAGSMVQSTDIPHLGRNQYVN"
     exon            1..86
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            87..134
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            135..332
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            333..401
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            402..497
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            498..606
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            607..699
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            700..781
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            782..852
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            853..937
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            938..1075
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            1076..1156
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            1157..1263
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            1264..1404
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            1405..1476
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            1477..1555
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            1556..1643
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            1644..1755
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            1756..1872
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
     exon            1873..2436
                     /gene="Glb1l2"
                     /gene_synonym="RGD1564436"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcccaagt ggagcctgcg gcggaggccg ggccgcacac tcggactcct gctgctgctg
       61 gtcttgagct tcctggtgct ccgcaggtat ctgaatccca aggtgggcag ctgtgaccgt
      121 gaaggggctc tgaggttgaa ctggacctct gtgcttcccc tatggctcca acgtcagcgc
      181 ctgggacttc gaacaaaagg cccaaacttc atgctggagg actccacctt tcagattttg
      241 gggggatcca tacactattt ccgtgtgccc agggaatact ggagggaccg cctgctcaaa
      301 ctgaaagcct gtggcttgaa tacccttact acctatgtgc catggaacct ccatgagcca
      361 gaacgaggca aattcgactt ctctgggaat ctggacctag aggcctttat ctggctggct
      421 gcaaagattg gcctgtgggt gattctgcga ccagggccct acatctgtag tgagattgac
      481 ctcgggggct tgcccagctg gctccttcaa gaccctgaca tgaagctaag aacaacttac
      541 cctggcttca ctaaggcagt ggatctttac tttgaccacc tgatgtccag ggtggtgccg
      601 cttcagtata agcatggggg gcctatcatt gcggtgcaag tggagaatga gtacggttcc
      661 tataacggag accatgcgta catgccttac atcaagaagg cactggaaga ccgtggcatc
      721 attgagatgc tcctgacctc agacaacaaa gatggcctgg aaaagggagt ggttgacgga
      781 gtgctggcca ccatcaactt acagtcacaa caggagctgg tggcactaaa cagtattctc
      841 ttatctatac aggggattca acccaagatg gtgatggagt actggacagg gtggtttgac
      901 tcgtggggtg gctcccacaa catcttggat tcctctgagg tcctgcaaac agtgtctgcc
      961 atcatcaaag acggctcctc catcaacctg tacatgttcc atggaggcac aaattttggc
     1021 ttcataaatg gagccatgca ttttggtgac tacaaggctg atgttaccag ctatgactac
     1081 gatgctatat tgacagaggc tggagattac actgccaaat acaccaagct tcgagaactc
     1141 tttggaacct tctcaggcgt ccctccacct cctccacctg agcttactgc taagatggtc
     1201 tatgagccag tgactccatc tttctacctg tcactgtggg acgctctcct gtacatggat
     1261 aagccaatca catctgagat acccatcaac atggagaacc tgccggtaaa caatggtaat
     1321 gggcaggcct ttgggtatgt cctctatgag accaccatct tttcatctgg cgtcctcagt
     1381 ggccttgtgc gtgacagagg acaggtcttt ttgaacagag tgtccatagg attcttggac
     1441 tatacgacaa cgaagatcac tatccccttg acccagggtt acacaatact gaggatcttg
     1501 gtggagaatc gtgggcgagt caactacgga aataacattg acagccagcg caaaggttta
     1561 attggaaatc tctatctgaa taataaaccc ctgaaaaact tcaaaatcta cagcctggat
     1621 atgacaaagc agttctttca gaggttcgac atggacaagt ggagtgtcgt acccaaagaa
     1681 attacctttc ccgctttctt cctgggcacc ttgtcagttg gcatttaccc ttctgacaca
     1741 tttctgaagt tggagggctg ggtgaagggg gttgtgctcg tcaatgatca caaccttgga
     1801 cgctactgga atgtaggacc tcaggagact ctctacctcc ccggtgtctg gctggacaaa
     1861 ggactcaaca aggttatcat tttcgaagag acaatggcag gctccatggt acagtctact
     1921 gatatccccc acctgggcag gaaccagtat gttaactgaa cagcagcccc tgcagcccct
     1981 gctatggctg gcagcttcct tccttcctgt cctgcaggag aagtcatcgt aactagcaac
     2041 ctcagggaat gaagggctat attcaactca ggccaaaatt ctatgcctaa gcctaagaga
     2101 agatggggta gcgctgtctg ggatacactc agagtgagat gtcttctctt ctggttttgt
     2161 ggacgggcat tttctgctcc cctgatcttc caggggaggc cacagagcgg ccacagagta
     2221 tgtagttagt tatatcacct tcaaagaagg tgctgaggcg ggtgggcact gccctcttct
     2281 ggaagtgaaa gcctcactgg ccagcctgct ggttctaggt aggctttttg aacattccca
     2341 gcagggtgtg gtcacaccct agacagcttc tttgtgctcc tgaatttgtg ggtttgtcat
     2401 tgtttgtaga gccaagagaa aaggggtctt atttga
//
