LOCUS       NM_001197092            1320 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus gap junction protein, epsilon 1 (Gje1), mRNA.
ACCESSION   NM_001197092 XM_001060987
VERSION     NM_001197092.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Puk,O., Loster,J., Dalke,C., Soewarto,D., Fuchs,H., Budde,B.,
            Nurnberg,P., Wolf,E., de Angelis,M.H. and Graw,J.
  TITLE     Mutation in a novel connexin-like gene (Gjf1) in the mouse affects
            early lens development and causes a variable small-eye phenotype
  JOURNAL   Invest Ophthalmol Vis Sci 49 (4), 1525-1532 (2008)
   PUBMED   18385072
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Oct 19, 2022 this sequence version replaced NM_001197092.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-105               JAXUCZ010000001.1  10908201-10908305   c
            106-288             JAXUCZ010000001.1  10907330-10907512   c
            289-1320            JAXUCZ010000001.1  10905890-10906921   c
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p13"
     gene            1..1320
                     /gene="Gje1"
                     /gene_synonym="Cxnt; RGD1308189"
                     /note="gap junction protein, epsilon 1"
                     /db_xref="GeneID:681263"
                     /db_xref="RGD:1598009"
     exon            1..105
                     /gene="Gje1"
                     /gene_synonym="Cxnt; RGD1308189"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..684
                     /gene="Gje1"
                     /gene_synonym="Cxnt; RGD1308189"
                     /note="gap junction epsilon-1 protein; connexin t"
                     /codon_start=1
                     /product="putative gap junction epsilon-1 protein"
                     /protein_id="NP_001184021.1"
                     /db_xref="GeneID:681263"
                     /db_xref="RGD:1598009"
                     /translation="MSLNYIKNFYEGCVKPPTVIGQFHTLFFGSVRMFFLGVLGFAVY
                     GNEALHFSCDPDKREINLFCYNQFRPITPQVFWALQLVIVLLPGAIFHLYAACKSINQ
                     ECILQKPTYTVIYILSALLRISLEVSAFWLQIHLFGFQVKPVYLCDAESLGQKINTLK
                     CMVPEHFEKTIFLIAMYTFTVITMVLCVAEIFEIIFRRSCFLFKR"
     exon            106..288
                     /gene="Gje1"
                     /gene_synonym="Cxnt; RGD1308189"
                     /inference="alignment:Splign:2.1.0"
     exon            289..1320
                     /gene="Gje1"
                     /gene_synonym="Cxnt; RGD1308189"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaagccatc tgacagcata gttcaacgac agcccacggg gatgccaaga taacatctcc
       61 tgaaagatgt ctctaaacta catcaagaac ttctatgaag gatgtgttaa acctcccacc
      121 gtgatcggcc agttccacac tctcttcttc ggctcagtgc ggatgttctt ccttggagtg
      181 ttgggctttg ctgtctatgg gaacgaggct ctgcacttca gctgtgaccc agacaaaaga
      241 gagataaatc tgttctgtta caatcagttc aggccaataa cccctcaggt gttctgggca
      301 ttacagctcg tgattgtcct gctccctgga gctattttcc acctttacgc ggcatgtaaa
      361 agcatcaatc aagagtgcat tctccagaag cccacgtaca ccgtgattta catcctctcg
      421 gccttgctaa gaatcagcct ggaggtgtca gccttttggc ttcagattca cctctttggc
      481 ttccaagtga agcctgtata cttgtgcgat gctgaatctc tcggtcaaaa aataaatact
      541 ctaaaatgca tggttccaga acacttcgaa aagactatct tcctcatcgc aatgtacacg
      601 tttactgtga ttaccatggt gttatgtgtt gctgagattt ttgagatcat atttagaagg
      661 tcatgtttcc tctttaaacg gtgacagggt tgactgctta ttatcatgcc atggttccca
      721 tgagtcgttt atatttggtt ttctgatcgg gtacttcaac cccatatgtt ctttaaacct
      781 cagtgtgtct gtcatttgtg tatactagag aacgggatgt caagttctga actaggtgtt
      841 ttagagcaaa catttcctcc tattggaatt ttataattta ttatataata atggacatgt
      901 aagcctaatg atagctcatt tttaaatgct aaatttatag gcttctctca tatacaacac
      961 atttaagtga tcacattatt tgtggcctaa aagacttctt gtgtcagtta aagactggaa
     1021 aattgatgtt cagagatgtt gtttatgtgc cctaagtcac aaaaccaaac cagagtccag
     1081 gtctttcctt atacaccgac tcatgcacct ttaacttgga cataattatt tttgcatttc
     1141 cgtaaaacgt acctttaaac acaaaatatg aaggaattga gagtcataga gtttaatcac
     1201 taactcaaag aagatgagca attgattttt tttaagtatt aaacccatat tgttttgctg
     1261 aaatcaatat taaatgatta tggggatagt taccaaataa attagacttg ttacaaataa
//
