LOCUS       XM_343965               1393 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus gap junction protein, delta 3 (Gjd3),
            mRNA.
ACCESSION   XM_343965
VERSION     XM_343965.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_343965.8.
            
            On Jan 21, 2021 this sequence version replaced XM_343965.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1393
                     /gene="Gjd3"
                     /note="gap junction protein, delta 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 1 EST, 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     43 samples with support for all annotated introns"
                     /db_xref="GeneID:363677"
                     /db_xref="RGD:1308942"
     CDS             116..952
                     /gene="Gjd3"
                     /codon_start=1
                     /product="gap junction delta-3 protein"
                     /protein_id="XP_343966.4"
                     /db_xref="GeneID:363677"
                     /db_xref="RGD:1308942"
                     /translation="MGEWAFLGSLLDAVQLQSPLVGRLWLVIMLIFRILVLATVGGAV
                     FEDEQEEFVCNTLQPGCRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVIYSMHQASK
                     EAGGAQPAPPCARGRAEVPCSPCALRARRARRCYLLSVALRLLAELAFLGGQALLYGF
                     RVAPHYACAGPPCPHTVDCFVSRPTEKTVFVVFYFAVGLLSALLSVAELGHLLWKGRQ
                     RAKLLPPPPPSPSLPSQRGDPDPFGPPAYAHRSPAGDSEGEGGSGHSKASLATVRQDL
                     AI"
ORIGIN      
        1 tatcgtccat cccagccaaa tccaaaaagg aaaatgaaag agggacccag agggacaggc
       61 cccagctgtc tcccaaggtc ctccgctcag ctctaaggcc caggtcccag gcaccatggg
      121 ggagtgggcg ttcctaggct ccctgctgga cgccgtgcag ctgcagtcgc cgctcgtggg
      181 tcgcctctgg ctggtgatca tgctgatctt ccgcatcctg gtgctggcca cggtgggagg
      241 tgcggtgttc gaggacgagc aggaggagtt cgtgtgtaac acgctgcagc cgggttgtcg
      301 ccagacctgc tacgaccgcg ccttcccggt gtcccactac cgcttctggc tgttccacat
      361 cctgctgctg tcggccccgc cggtgctgtt cgtcatctac tccatgcacc aggccagcaa
      421 ggaggcgggt ggcgcgcagc cggccccgcc gtgcgcgcgc gggcgtgccg aggtgccgtg
      481 ctccccgtgc gccctgcgcg cccgccgcgc gcgccgctgc tacctgctga gcgtggctct
      541 gcgcctgctc gccgagctgg ccttcctggg cggccaggcg ctgctctatg gcttccgcgt
      601 ggccccgcac tacgcgtgcg ccgggccacc ttgtccgcac acggtcgact gtttcgtgag
      661 ccggcccacc gagaagacgg tcttcgtggt cttctacttc gccgtcgggc tgctgtcggc
      721 gctgctcagc gtggcggagc tgggccacct gctctggaag ggtcgccagc gagccaagct
      781 gctcccgccg ccgccgccgt cgccctctct gccttcacag cgcggggatc cggacccctt
      841 cggcccgcca gcctacgcgc accgctcacc ggccggcgac agcgagggcg agggcggcag
      901 cggccacagc aaagcgtcgc tggccaccgt gcgccaggac ctggccatct agcggcgaga
      961 tcggaggctg gatgtcagca cctgggtctt tggaggcaga agacgtggct tctgaaagac
     1021 tgcataggac cctgcctgag cagaagatga acagaggggg ccccctgagc ggaaaatacg
     1081 cagagtggaa cgccggggtt tgggtgaggg tggtgtcgct agttatagca tccgtgttga
     1141 atcggggagg ctcctccatg ctgtgatccc agaagaaagg aaagacaccg agggtcccct
     1201 gagaggaggc aaacaagcag tgggcgactt gattgttgca caagggacaa aaccgacagt
     1261 gatggcaaca ttcccaggtc ccccgctaat tcagagaaaa gtgattctct gtgagcgctg
     1321 tgcacacaag cacacctgga cacactcaga taggttggtt gttcgagaac agtaaacctt
     1381 tgtgagctgt gta
//
