LOCUS       XM_221997               3334 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus gap junction protein, gamma 3 (Gjc3),
            mRNA.
ACCESSION   XM_221997
VERSION     XM_221997.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_221997.10.
            
            On Jan 21, 2021 this sequence version replaced XM_221997.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3334
                     /gene="Gjc3"
                     /note="gap junction protein, gamma 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 42 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:288529"
                     /db_xref="RGD:727930"
     CDS             1601..2374
                     /gene="Gjc3"
                     /codon_start=1
                     /product="gap junction gamma-3 protein"
                     /protein_id="XP_221997.5"
                     /db_xref="GeneID:288529"
                     /db_xref="RGD:727930"
                     /translation="MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVF
                     GNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGY
                     WEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYG
                     FKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRV
                     WKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF"
ORIGIN      
        1 tctctcttct cctctagatc cactcctttt ctctttcttt ttttctaatg aaaagaatgg
       61 ggttctaaga gatagcaacc aaatatgaca gaataaaata agatagagca aaaaccatca
      121 cattgaggtg ggacaaagca acccaacaga aggaaaagag ccccaagggc aggcaggctc
      181 aagaatcaga gacccacttg ttcacactct caggaatact cctaccaaca cacaggcaca
      241 ctcttatgtt agtaaactta tatttcaggg tactttgttt tgaatgagtg agtttgttaa
      301 gcacatagct tgctatactt tcatttttga atgagtttat tgagcacaag gcagggtaaa
      361 ggagtaaata aaaagtgatt ggttgactga gatgaatctc atcatattgg ggcttacaaa
      421 cagccagcag gaaatgacta gggagagaca gtcagatgga gtttcccaca gagaaattcc
      481 agggcggagc agggtgtccc ctccagtgaa ccttttaagt aagacaaccc cacacaaaga
      541 actacaggca actgggtaaa actgggagtg ggagaggtgg tccttcccag gaaagagtgc
      601 tctaattgga tgtttgatgc caaatagtca accctgaaaa cacagataca aatagcttta
      661 tatggactca atagattaca cttgacaatc tatgtgtaca caagcatgca ataataattg
      721 attaaaaaag gccatgaatt tgaaggagat aagggaggtg tatatgacac acttggggga
      781 gaggaaagaa gggcaaattg tcattaaaat gctatctcca aaggaaaaac taaaagagga
      841 aaaatagata acaaataata gacagaagca tcctcatcaa attgggtgct ctcaagatcc
      901 aacagaaact gactgggaaa ttcagagcag tcatctggag ttctccactg agctttctgt
      961 cctcgcctga gctccccatg ggtgcactgc agcccttctc ccactctggg acacacaatg
     1021 taggacatag cagcagcttc tgctgtattt tctcgcagct cgttttcttc tagctgtttt
     1081 caagaagaca atgtttttac tctttggctg ttggctgttt cccttcctcc gtgttacaga
     1141 gtctgggagg cagctcatcc ctaggtcctt agaagatcct ctgagacaaa catacttggg
     1201 tctcaagtga gagaggtcag tcctactttt cagtgagctc tcagtgagct caatcatccc
     1261 aagacaatta accaatagaa tgtacagaat aaaccttcac ttctttcaga tggtctcaaa
     1321 gcctccattc acgtagagaa tacatcccgt gaccttgaca ccacagtcac tccccagaga
     1381 tcgtgacttg agggcagggt ctcctggtcc tccagttgga attcttttat gctgcagcga
     1441 gcctgccagg aatgaaaagg agaaggcgaa agagtgggtg gctgcaggag gcagggccat
     1501 tgccagattc tagaccctgc aggctccagt gtgaggattc cttttggctc ctttcctctg
     1561 tggttgatgc ttctgcttgg agttgccagg caagtgcagg atgtgctgca gtttcctgag
     1621 acagctattg gctcgggaga gccagcactc caccccggtg gggcgcttcc ttcttccggt
     1681 gctcgtggga ttccgtctcc tgattctggt ttccagcgga cctggcgttt tcggcaatga
     1741 tgagaacgaa ttcatgtgtc atttagggca gccaggatgt aagaccattt gttatgatgt
     1801 cttccgccct ctctctccgt tgcgcttctg ggccttccaa gtcatcctga tggctgtacc
     1861 cagcgctatt tatgtggctt tcactctgta tcatgtgatt ggatactggg aggtaccagg
     1921 caggaacaag gagcaagagg cccagatttg caaagggggt cgttgcaagg atgtctcagg
     1981 ggctatgagc ctcaagcttc tctgggccta tgtggcacac cttggggtgc ggctggtcct
     2041 tgagggagca gctctaggag ttcagtacca tctatatggc ttcaagatgc ccagcacttt
     2101 tatatgtcgt gaggatcctt gtattggcag cacaacctgt ttccagtctc acccttctga
     2161 gaagaccatc ctcctcaaca ccatgtttgg gatcagcggg gcctgtctct tatttatttt
     2221 cttggagctt gtgcttttgg gtttagggag ggtttggaag acgtacaggc acaaacttcc
     2281 cctctttaag aacttgtcaa cctcagagcg ctctgtaaga cacaaggaca caaccgatga
     2341 cttgtcagtg gtggagacaa aagagccatt ttgagaagca ggtgagaacc ctactgacag
     2401 tcatctgtcc ctgcctctga tgtctctgtg ttggcagtcc ccacccttgt cctttggggt
     2461 gaacagctcc ccacgttata atgtgtagat aatcgatctc caagtagata cattctaaaa
     2521 attatttact ttttacttta aattgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     2581 gtgtgtgtgt gtgtgtgtga attcaggtgc ctgtggaggc cagagagagg tagctgtcca
     2641 atgtgggtac tgggttcttt ggtttctttg caagaggagt atgcactcta aatcactgga
     2701 atatctctcc agatcccaga tgtatttttt ttaaagggat gaaatgttta ctttggttca
     2761 cagtttgagg gcatagtctc tcatggtgga gaaggcattt atatttatat atgaaacatg
     2821 tagccctggc tggcctggaa cttgctatgt agatcaggct ggctttgaac tcatggagaa
     2881 ccatttgcct ctggctccca agttctaaga ttaaaagcac aagccaccac gtgtggctga
     2941 ggcagctgta ttttgattac catcccagac tgtttaccag tacctatccc tatcagtttc
     3001 acatctctgt gtagtagacc atgatctgtg cactctctgc cctttcctgt cttcagcttc
     3061 tgcttggttt ctactttgca gagttataag tttgcctgta gaaaactctg gaacctgatc
     3121 ttcttcaata catccagtgt tttggctggg gagatggtac agtgggtaaa gactcttgtc
     3181 atgaagcctc atgatctgag attgatctcc agaacccaca gggagaaggg agaaaaacca
     3241 gctcccacag gatgtccaca tacatgcttt ggagagcata cacacactgt acacacacac
     3301 acacacacac acacacacac acacacacac acac
//
