LOCUS       NM_001411855            3503 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus gap junction protein, alpha 10 (Gja10), mRNA.
ACCESSION   NM_001411855
VERSION     NM_001411855.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3503)
  AUTHORS   Shelley,J., Dedek,K., Schubert,T., Feigenspan,A., Schultz,K.,
            Hombach,S., Willecke,K. and Weiler,R.
  TITLE     Horizontal cell receptive fields are reduced in
            connexin57-deficient mice
  JOURNAL   Eur J Neurosci 23 (12), 3176-3186 (2006)
   PUBMED   16820008
REFERENCE   2  (bases 1 to 3503)
  AUTHORS   Cruciani,V., Heintz,K.M., Husoy,T., Hovig,E., Warren,D.J. and
            Mikalsen,S.O.
  TITLE     The detection of hamster connexins: a comparison of expression
            profiles with wild-type mouse and the cancer-prone Min mouse
  JOURNAL   Cell Commun Adhes 11 (5-6), 155-171 (2004)
   PUBMED   16194882
REFERENCE   3  (bases 1 to 3503)
  AUTHORS   Hombach,S., Janssen-Bienhold,U., Sohl,G., Schubert,T., Bussow,H.,
            Ott,T., Weiler,R. and Willecke,K.
  TITLE     Functional expression of connexin57 in horizontal cells of the
            mouse retina
  JOURNAL   Eur J Neurosci 19 (10), 2633-2640 (2004)
   PUBMED   15147297
REFERENCE   4  (bases 1 to 3503)
  AUTHORS   Manthey,D., Bukauskas,F., Lee,C.G., Kozak,C.A. and Willecke,K.
  TITLE     Molecular cloning and functional expression of the mouse gap
            junction gene connexin-57 in human HeLa cells
  JOURNAL   J Biol Chem 274 (21), 14716-14723 (1999)
   PUBMED   10329667
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-113               JAXUCZ010000005.1  51797801-51797913   c
            114-1569            JAXUCZ010000005.1  51791489-51792944   c
            1570-3503           JAXUCZ010000005.1  51787407-51789340   c
FEATURES             Location/Qualifiers
     source          1..3503
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q21"
     gene            1..3503
                     /gene="Gja10"
                     /gene_synonym="Cx-57; Cx57; Cxnn; RGD1309630"
                     /note="gap junction protein, alpha 10"
                     /db_xref="GeneID:313126"
                     /db_xref="RGD:1309630"
     exon            1..113
                     /gene="Gja10"
                     /gene_synonym="Cx-57; Cx57; Cxnn; RGD1309630"
                     /inference="alignment:Splign:2.1.0"
     exon            114..1569
                     /gene="Gja10"
                     /gene_synonym="Cx-57; Cx57; Cxnn; RGD1309630"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..1608
                     /gene="Gja10"
                     /gene_synonym="Cx-57; Cx57; Cxnn; RGD1309630"
                     /note="connexin 57; gap junction membrane channel protein
                     alpha 10; connexin n"
                     /codon_start=1
                     /product="gap junction alpha-10 protein"
                     /protein_id="NP_001398784.1"
                     /db_xref="GeneID:313126"
                     /db_xref="RGD:1309630"
                     /translation="MGDWNLLGGILEEVHSHSTIVGKIWLTILFIFRMLVLGVAAEDV
                     WDDEQSSFACNTQQPGCSNICYDDAFPISLIRFWVLQIIFVSSPSLVYMGHALYRLRD
                     FEKQRQKKKLYLKAQMENPDLDLEEQQRVERELRRLEEQKRIQKVPLKGCLLRTYVLH
                     ILTRSVLEVGFMIGQYILYGFQMHPIYKCTQAPCPNAVDCFVSRPTEKTIFMLFMHSI
                     AAISLLLNILEIFHLGIRKIMRALDGKSSSGNTENETGPPFHSTNYSGAQQCMVCSSL
                     PERVSLLQANNKQQVIRVNIPRSKSVWQIPHPRQLEVDVSCGKRGWAERVENSEQLHV
                     HSPCPHERSARIQHPGQQPCHSIVCPKNVMSQSWLGTMTASQHRPSSALETWERSQGP
                     EVSGKPLTDRQSHFQGSDGSARESGVWTDRLGPGSRKASFLSRLISEKGQQHSDSGSS
                     RSLNSSCLDFPHGENSPSPLPSATGHRASMNMLLELSSIMKK"
     exon            1570..3503
                     /gene="Gja10"
                     /gene_synonym="Cx-57; Cx57; Cxnn; RGD1309630"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagcctttgt accagcaggc agcagcagaa gcagctgttc tgttaaacag ccacacatgg
       61 tgcaacttga aggtcctgca aactccagtg gaattttctg gtctgacttt aagatgtgaa
      121 atcctcgcca tgggagattg gaatttactg ggtggcatcc tagaggaagt ccactcccac
      181 tccactatag tggggaaaat ctggctgact atcctcttca tcttccgaat gctggtactt
      241 ggtgttgctg ctgaggatgt ctgggatgac gagcagtcct cctttgcctg caacacccag
      301 cagcctggtt gcagcaatat ctgttatgat gatgctttcc ctatctctct gatcagattc
      361 tgggttttgc agatcatctt tgtgtcttcc ccttctttgg tgtatatggg ccatgcactc
      421 tatagactca gggactttga gaaacaaagg cagaagaaga agttatacct caaagcccag
      481 atggagaacc cagatcttga cttggaggag caacaaaggg ttgagaggga gctgaggaga
      541 ctcgaggagc agaagaggat tcaaaaagtc cctctgaaag ggtgtctcct gcgcacctac
      601 gtcttacaca tcttgaccag atctgtgcta gaggtagggt tcatgatagg ccaatatatt
      661 ctctatgggt tccaaatgca ccctatttac aagtgcacac aagccccttg ccccaacgca
      721 gtggactgct ttgtatccag gcccacagag aagaccattt tcatgctctt tatgcacagc
      781 attgcagcca tctccttgtt actcaatatt ctggagatat ttcatctcgg catcaggaag
      841 atcatgaggg cactcgatgg caaatccagc agtgggaaca ctgagaatga aacaggccct
      901 ccgttccatt caaccaacta ctcaggggcc cagcagtgta tggtttgttc ttctttacct
      961 gaaagagtct cactacttca agccaacaat aaacagcaag tcatccgtgt caacatacca
     1021 aggtctaaaa gcgtgtggca aattccacat cccaggcaac ttgaggtaga tgtttcctgt
     1081 ggcaaaagag gctgggctga gagagttgag aacagtgaac agctccatgt ccatagtcca
     1141 tgtccacatg agcgcagcgc cagaattcag cacccgggac agcaaccatg ccattccatc
     1201 gtttgcccca agaatgtaat gtctcagtcc tggttaggta caatgacagc ttctcaacac
     1261 cgtccatcat ctgcgttaga aacctgggag cgatcccagg gcccagaagt ttcagggaaa
     1321 cctctcacag atcgccagag tcacttccaa ggcagcgatg gcagtgcaag agagagtggg
     1381 gtatggacag acagattagg cccaggtagt cgcaaggcca gctttctatc gaggctgata
     1441 tcagaaaagg gacaacagca tagtgactca ggaagctcga ggtctctgaa tagctcctgc
     1501 ttggattttc cacatgggga aaacagccca tcacctctgc catcagccac tgggcacaga
     1561 gcatcgatga atatgcttct agaactttca tccattatga aaaaataatg caccaagagc
     1621 agttgccaat ctacaagatg aaagctatgc ctgtgtcatc tcaaactgga agaactctac
     1681 atggtctgcc agggtgtgtg cttggatctg gagtgccctc aaaggtccag gttaaaggtc
     1741 ccagagttgt cccttggaga ttgtaaaact ttaagaggtc ctagtgagaa ctcttaggtt
     1801 attggagatg tgctcttgaa ggaaatgtgg aatcgctccc cctttctcct tcctttttcc
     1861 ttttttgttg aggtgggggg cagagtctct atttagtcat ggttgtcttg gaactctcta
     1921 tgtagaggag tctgccctca agctcacaca gatccacctg ccttggcttc tccagtgctg
     1981 agactaaatg cacagccacc aagcctagct cccctccctt ttcttttgca tactggctac
     2041 gaggtaagtc ttttcatgga aggaggtgtg gccttgttgg aggaagtgtg ttgatgtggg
     2101 gttgggcttt gaggtctcct atgctcaagc tctgcccagt tgtggaacct agtccccttc
     2161 tgctgtctgt ggatcaagat gtagaactct cagctccttc tccatcacca tatctgcctg
     2221 gatgcttccc tgtttcccat catggtgata atggactgaa cctctgaacc tgtaagccag
     2281 cctcaatcaa atgttgtcct ttataagagt tgccttggtc atggtgtctc ctcacagcaa
     2341 tggaaatccc aatgaagaca actctcaaag ggagcaccag atctgcagct ctgcagcctt
     2401 ggtccctctc acagattcag agcaggctgg aggctccaaa ctcaacctgg gcttgagcgt
     2461 acttcctgtt cgtaagggag aggctgataa gacacttctc atgtgatttc tcacatcagt
     2521 tcgttttgtg agcgtgaaga aaatgaaatt ttaatttata aatgtttcag aaatcgagca
     2581 atgatttaaa caagggcaaa tatgtccatg gtctgcttat atcctggtca gcacattcac
     2641 tgttagtgat aataaatgct gactgtgggg ttggggattt agctcagtgg tagagcgctt
     2701 gcctagcaag cgcaaggccc tgggttcggt ccccagctct gaaaaaaaaa aatgctgact
     2761 gtggcccaaa acttgtttcc agggattacc aagaggcctt atcttgtctt gaccctccct
     2821 gtggtcagga cccaccccga gaggcgcttc aaaggacact tgagccccac agtgcagaga
     2881 ggcttgcggg gttgtaggag gagttatatt tagctctttc tccccccccc ccccggagct
     2941 ggggaccgaa cccagggcct tgcgcatgct aggcaagtgc tctaccgctg agctaaatcc
     3001 ccaaccccaa tttagctctt tcattctgta tcacatgacc agattgccat gaaacactgg
     3061 ctacatactc tgtaacaaag acttcaaagc ctaagaagtg tcaatttagt tcgtcatgaa
     3121 gctctgtatc atttatgtcc tgtgtgctgg atagttttat gttaatttga tacaagctaa
     3181 agtcataggg aacctcaatt aagaaaatgc ctccataata tcaggttgaa gacaatcctg
     3241 taagtctttt tcctaattag tgattgatgt gggagggccc agcccattgt gggtagtacc
     3301 atcctgagct ggtggtcctg ggttctataa gaaagcaggc tgagcaagcc acaaggagca
     3361 agccagtacg ttgcactcct ccatggctct gcatcaggtc ctgtctccag aaccctgttc
     3421 tgcttgagtt cctgtcttga ataccttcat gatgaatcgt gatatggaag tgtaagccaa
     3481 ataaaccctt tctcttcaag ctg
//
