LOCUS       NM_001109282            3435 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus GIPC PDZ domain containing family, member 3
            (Gipc3), mRNA.
ACCESSION   NM_001109282 XM_001075721 XM_576176
VERSION     NM_001109282.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Feb 3, 2022 this sequence version replaced NM_001109282.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643289.19756.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMN06621351
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-231               JAXUCZ010000007.1  9026905-9027135
            232-417             JAXUCZ010000007.1  9028274-9028459
            418-598             JAXUCZ010000007.1  9028662-9028842
            599-711             JAXUCZ010000007.1  9030003-9030115
            712-793             JAXUCZ010000007.1  9031118-9031199
            794-3435            JAXUCZ010000007.1  9031364-9034005
FEATURES             Location/Qualifiers
     source          1..3435
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..3435
                     /gene="Gipc3"
                     /gene_synonym="RGD1563255"
                     /note="GIPC PDZ domain containing family, member 3"
                     /db_xref="GeneID:500789"
                     /db_xref="RGD:1563255"
     exon            1..231
                     /gene="Gipc3"
                     /gene_synonym="RGD1563255"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..945
                     /gene="Gipc3"
                     /gene_synonym="RGD1563255"
                     /codon_start=1
                     /product="PDZ domain-containing protein GIPC3"
                     /protein_id="NP_001102752.1"
                     /db_xref="GeneID:500789"
                     /db_xref="RGD:1563255"
                     /translation="MDSAAPREPGATEPPARARPRLVFRTQLAHGSPTGRIEGFTNVR
                     ELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTK
                     TEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAK
                     MLRELPKSQPFTLRLVQPRRAFDMIGQRSRSSKCPVEAKVSSGRETLRLRSGGAATVE
                     EAPSDVEAAAARRVDDLLESYMGIRDPELAAAVVETARSSVGAQAFARGLDAVLGEFA
                     FPDEFVVEVWAAIGEAHDACG"
     exon            232..417
                     /gene="Gipc3"
                     /gene_synonym="RGD1563255"
                     /inference="alignment:Splign:2.1.0"
     exon            418..598
                     /gene="Gipc3"
                     /gene_synonym="RGD1563255"
                     /inference="alignment:Splign:2.1.0"
     exon            599..711
                     /gene="Gipc3"
                     /gene_synonym="RGD1563255"
                     /inference="alignment:Splign:2.1.0"
     exon            712..793
                     /gene="Gipc3"
                     /gene_synonym="RGD1563255"
                     /inference="alignment:Splign:2.1.0"
     exon            794..3435
                     /gene="Gipc3"
                     /gene_synonym="RGD1563255"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgtcgcgg gttccgggcg ggaggcgcag gacgctgcga ccctgcgcgc catggacagt
       61 gctgcgcccc gcgagcccgg ggccaccgag cccccggccc gcgcgcgccc gcgcctagtg
      121 ttccgcacgc agctggcgca cggcagcccg actggcagga tcgagggctt cacgaacgtc
      181 cgagagctct acgccaagat cgcggaggcc ttcggcatcg cgcctactga gatcctattc
      241 tgcaccctca acagtcacaa agtggacatg cagaagttgc tggggggaca gattgggcta
      301 gaagacttca tctttgcgca cgtgcgtgga gagaccaaag aagtggaggt taccaaaacg
      361 gaggacgctc taggactgac cattacagac aacggggctg gatacgcctt catcaagaga
      421 atcaaggaag gcagcattat caacaggatt gaggcggtgt gcgtggggga tagcatcgag
      481 gccatcaatg accactctat tgtgggctgc cggcactacg aggtggccaa aatgctacgg
      541 gaactgccca aatctcagcc cttcaccctg cgtctagtgc agccccggag agccttcgat
      601 atgattggtc agaggagcag gagcagcaag tgtcctgtgg aagctaaagt gagcagcggg
      661 agggagaccc tgcgcctgcg ctcagggggc gctgccactg tggaagaggc gcccagcgac
      721 gtggaagcgg cagcggcgcg cagggtggac gacctactgg agagctacat gggcatccga
      781 gaccccgagc tggcggccgc ggtggtggag actgctcgga gctcggtggg agcccaggcc
      841 ttcgcacgcg gcctggacgc tgttctgggc gagttcgcct ttccagacga gttcgtggtg
      901 gaggtgtggg cagccatcgg cgaggcccac gacgcttgtg gctagcgtgt gtgggagtct
      961 ccagtcctgg gcccagcccc ctgccccagc gccactccac aacccaggac agccctgaga
     1021 cacgctccac caccagaacc cgacccagtt ctgagaccca ggcccatctt gaggcccagc
     1081 ctggttctag cacccagttc agctctgaga cccatccgga acctcatccc ggttctggaa
     1141 cccaggttag ctcagaggtc cagcccagct ctagaaccca acccagttct ttgatccagg
     1201 cccattctga ggctcagctt gcttctagca cccagtcaga atcccagcct ggttctggaa
     1261 cccaggttag ccccaaggcc aggtcctgct ctagaaccaa aagtgctatc ctgcctagct
     1321 ctagaaccca gctcagctct gagacccagc cggaattccc tgacagccct gaactccagt
     1381 cctgctctaa aaccaaaatt gaagcccagg gcagctctag aacccaaccc agttctgtga
     1441 cccaggccca ccccaaggcc cagcttggtt ctgtaaccct ggttgtctct caagaccagc
     1501 cagcctttaa atcccagtct attcctgggg tacagtctga cttcagaaca caggccagcc
     1561 ctaaggttca ggctggctct ggaacccaga gcggtcccag gcctgagccc tgttctaaaa
     1621 cttatcctga atctgactgc caacccatcc ctagagccca ggctggctct gaggtccagc
     1681 caggctctga ggccacaccc cgttctggag cccgggttag aacccaggcc agccctcagg
     1741 tcagcttctg ctcagagaca aagtctactt ctagaccaca tatgggctct gagggtgggc
     1801 ttggttctag aacacagacc cacccagata ggaagccatg ctctagagcc caggcagaca
     1861 ctgggaccaa ccctgatgct gcagcccagg tcgtggctga ccctcagcct tccagaatgc
     1921 agccaagccc tgtcccagag ccacactctg gaaccagtac aaatgttaag aggcagcagg
     1981 gctcagagca ccatcccagt tgccagtccc agaaaccagg ctctgagagc cagcccaggt
     2041 ataagacagc tgccaccatg gcctggccct tccctgatac ttggagtggt caaggaggaa
     2101 cggattgctt aggaccccaa ggaaggtcca gcaagccact ggctgccaga agccaagttg
     2161 gttggagtag ccatctgtcc cccacacctt tgcttagtac aggcacccaa agccatattg
     2221 ctgcccggcc caaacttaaa cctcagccct gccccacacc ccagctgcct gtcagcgcct
     2281 cccaacgccc tgcaccccaa gctggccccg gtgatgagtt ttattctgag gcccagccag
     2341 ggggcaggag caggactgca gacccccact cccaaatgcc acgcactacc gaaacgaggc
     2401 ccagctctgg ggtgtctccg ggcacagacc ccaccccacc cagaagatgt cgtgcaggct
     2461 tcaaagcaca gtccgattct gggacccaga ccgacttcca ggcctggcct agctccagag
     2521 cccatgttgg ttgggtcaga catcgaggaa cccagccaca gccattggta gagaaggagc
     2581 ccagctccag gtccctttct agttctgggg gcagaagcca gcacctggtg actgctggag
     2641 ccagctgtgt cccccagctg gacacaggac agtggcttgg ctctggagcc cacccagcct
     2701 cgagaaccca attcagtcct ccggttccaa tccgcgacgg agcccagcct agcgctcaga
     2761 aggattccag ttccagaatc caaccaggcc tcagccccag ccccagcccc agccccagcc
     2821 ccagccccag ccccagcccc agccccagcc ccagccccag ccccagccca ggcagttctg
     2881 gaagccagcc caacacagga gcctgctccc tcagttctag ggacagtcgt cgcccacaga
     2941 cccctgggct tgagcttata aaggagactg ataccctggc gggacctcag tctccaatcc
     3001 gacagacccc cagagcccct acccctgccc cgagcaaggt cgctgggcct cgtcctcaag
     3061 atggaaccca ggccacagca ggccccaggc caggcccccc accctccctc ctgggccctg
     3121 tgtcacgtgt cccagacacc ccccagaagc cagccctttt ccccaagccc cagctgggat
     3181 gtcagaagcc cagtcccccc ccccaccata cgcatcactc ctagctcctc ccccgggtct
     3241 gggcccctcc cccaccccag cttgtgacct gactcatccc agcaggagta ctagatggta
     3301 gaaactgagg cttgggtttc aggagcctgg ctgcgaaccc caaacccctt gtaagaggat
     3361 ccagccacag aaggcacagt ggtgggaggc tcctgggaga ccgtggtggg gaataaagga
     3421 gcccacacct ccaca
//
