LOCUS       NM_001037210            1376 bp    mRNA    linear   ROD 06-DEC-2024
DEFINITION  Rattus norvegicus GIPC PDZ domain containing family, member 2
            (Gipc2), mRNA.
ACCESSION   NM_001037210 XM_345300
VERSION     NM_001037210.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC100257.1.
            
            On Nov 18, 2005 this sequence version replaced XM_345300.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100257.1, EV771950.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676788 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q45"
     gene            1..1376
                     /gene="Gipc2"
                     /note="GIPC PDZ domain containing family, member 2"
                     /db_xref="GeneID:365960"
                     /db_xref="RGD:1560751"
     exon            1..258
                     /gene="Gipc2"
                     /inference="alignment:Splign:2.1.0"
     CDS             19..963
                     /gene="Gipc2"
                     /note="semaF cytoplasmic domain associated protein 2"
                     /codon_start=1
                     /product="PDZ domain-containing protein GIPC2"
                     /protein_id="NP_001032287.1"
                     /db_xref="GeneID:365960"
                     /db_xref="RGD:1560751"
                     /translation="MPLGLRGKKKAAKSKETARLVEGERSGGSQGVPGPPAPARRLVF
                     HAQLAHGSATGRVEDFSSISELYAKIAGVFEIAPSEILFCTLNTPKIDMGKLLGGQLG
                     LEDFIFAHVKGIKKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGSTIDSVKTICVGD
                     HIECINGENIVGWRHFEVAKKLKELKKEELFTLQLIEPKKAFEIGPRSKAGKTSTEKI
                     GTSRGTLRLRSKGPATVEDLPSEAKAKAIEKVDDLLELYMGIRDIDLATTMFEAGKDK
                     SNPDEFAVALDETLGDFAFPDEFMFDVWGAISDVKQGR"
     exon            259..444
                     /gene="Gipc2"
                     /inference="alignment:Splign:2.1.0"
     exon            445..625
                     /gene="Gipc2"
                     /inference="alignment:Splign:2.1.0"
     exon            626..732
                     /gene="Gipc2"
                     /inference="alignment:Splign:2.1.0"
     exon            733..814
                     /gene="Gipc2"
                     /inference="alignment:Splign:2.1.0"
     exon            815..1259
                     /gene="Gipc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caccctcgga tctgcaagat gccgcttggg ctgcgtggga agaagaaggc tgccaagtcc
       61 aaggagaccg cgaggctggt ggagggcgag aggtccggtg gcagccaggg tgtccccgga
      121 cccccagctc cggcacggag gctggtgttc cacgcacagc tggcgcacgg cagcgccacg
      181 ggccgagtgg aggacttctc cagcatcagc gagctctacg ccaagatcgc aggggtgttt
      241 gagatcgcgc cgtccgagat cctattttgt actttaaaca cacctaaaat tgacatggga
      301 aaactcctgg gtgggcagct aggtcttgaa gatttcatat ttgcccacgt gaaaggcata
      361 aaaaaggaag tgaacgttta taaatcagag gattcacttg gactcaccat cacggataac
      421 ggcgttggct atgcttttat caagagaatt aaggatggca gcaccattga ctcagttaaa
      481 acgatctgtg tgggggatca tatcgaatgt ataaacggag aaaatattgt tgggtggcgt
      541 cactttgaag tcgctaagaa gttaaaggaa ttgaaaaagg aggaactctt tactttgcag
      601 ttaatagaac ccaagaaggc atttgaaata ggaccaaggt caaaagccgg aaagacatca
      661 acggaaaaaa ttggtacttc aagagggact cttcgcctga gatcgaaagg ccccgctacg
      721 gtagaagatc tgccctctga agccaaagca aaggcgatcg agaaggttga cgacctcctt
      781 gaactgtaca tggggattcg agatatcgac ttagctacca ccatgtttga agctggaaaa
      841 gacaagagca acccagatga gtttgctgtc gcgctcgacg agaccctggg agactttgcc
      901 tttcctgatg agttcatgtt cgacgtatgg ggagccatca gtgatgtgaa acaaggcaga
      961 tgatggtgtg gccggtcttc ccgcagaaag gcccagagcg cttctgcggg cagcctcctc
     1021 gggagtctta gacgctgtta tggactctat ttcatcttca tgtgtatgag acacagtctt
     1081 tgaatgtaat tttgatttat ggataatgtt taatataatt tcttatataa tatgcccaag
     1141 gtgaattaaa gtgtgatcca ttttaatatt tgttcaaagc ttttagattt ttaaaggagt
     1201 ctctacgtag gtgattttgt actcctggct ctttccacat aaaatacttg attacaacaa
     1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//
