LOCUS       NM_001113782            1696 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus GIMAP family P-loop NTPase domain containing 1
            (Gimd1), mRNA.
ACCESSION   NM_001113782 XM_001077244 XM_342343
VERSION     NM_001113782.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1 and BC158622.1.
            
            On Jun 25, 2015 this sequence version replaced NM_001113782.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158622.1, SRR26360181.1288301.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-41                JAXUCZ010000002.1  223777899-223777939
            42-1696             BC158622.1         1-1655
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q43"
     gene            1..1696
                     /gene="Gimd1"
                     /note="GIMAP family P-loop NTPase domain containing 1"
                     /db_xref="GeneID:362042"
                     /db_xref="RGD:1563706"
     exon            1..327
                     /gene="Gimd1"
                     /inference="alignment:Splign:2.1.0"
     exon            328..722
                     /gene="Gimd1"
                     /inference="alignment:Splign:2.1.0"
     CDS             330..983
                     /gene="Gimd1"
                     /note="GIMAP family P-loop NTPase domain-containing
                     protein 1"
                     /codon_start=1
                     /product="GTPase IMAP family member GIMD1"
                     /protein_id="NP_001107254.2"
                     /db_xref="GeneID:362042"
                     /db_xref="RGD:1563706"
                     /translation="MMDANKMIINLAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVT
                     KDCSLGRSCHIHGFMRRGGHEISLQIQVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQ
                     EGLHLALLVHRADMPFFGQEASDSVQLIQELLGDSWKNYTAILFTHAEKIKEAGLSEE
                     EYLCEASDALLTLLNSVQHRHIFLYERGNSWSEQRIKILERIMEFIKENHFQVLSFT"
     exon            723..1665
                     /gene="Gimd1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaatggtcct caggaggtca gtgatctcat agtcattgga ggttcacctt gtttgaaagt
       61 agttttgacc tcttaccatt gttgtgtgac actatttcta ggaagaagtg agcaaatatc
      121 ttctcacctc agagagggag ccgataagag agcaagtaga aataccacta aagtccaaca
      181 tagtgagtca actgtgttat tggtattagt tagtgtaatg tggatgaggg tttatttcct
      241 gcaacagaaa tgactcgaag acagctgcat tactccaaca tgagtgacaa cgcggggcat
      301 actgcacaac ttgcaggttc ttaaaagcta tgatggacgc caacaagatg atcatcaatt
      361 tggctgtcct tggcaagact cagagtggga aaagttctgc tgggaacgtt cttttgggga
      421 gtgctgactt ctacagcagg tttgctccag gttctgtaac caaagattgc agcctgggtc
      481 gcagttgtca tatccatggc ttcatgcgtc gaggaggaca cgagattagt ttgcagatac
      541 aggtattgga cactccaggg tatccacaca gcaagctgag cacgagatgt gtaaaacagg
      601 aagtaaagaa ggccttggag catcactttg gacaagaggg tctccatctt gctctgctgg
      661 tccatagagc tgatatgcct ttcttcggac aggaagcatc tgactcagtc caattgattc
      721 aggaacttct gggagattct tggaagaact acaccgctat tctttttacc catgcagaaa
      781 aaatcaaaga ggctgggtta agcgaagagg aatatttgtg cgaggcttct gacgcactgt
      841 taaccttgct aaattctgtt cagcacagac atattttcct atatgaaaga ggaaactcat
      901 ggagtgaaca aagaattaaa atcttagaaa gaatcatgga atttataaaa gaaaatcatt
      961 ttcaagttct tagttttaca taaagtttaa gtgaaaagaa gagggcactg gttatcaatc
     1021 agggactgat atccgatttt aaaatctggg gcaggagaat tccctgtaca gccattgagt
     1081 cattttggaa aaaaattgta aataaaaact aatattaagg attcaagatt tcatgatatc
     1141 agagttatac tcacaagtat ttatccaaca gaaaagtgtg cacttgtgca tttagacaca
     1201 tgcatataca agaatgtcca tggtggtacc attgagcata gctgaagact gaaaactatc
     1261 taaatgctca tttagaataa tattcaaatt gtggtaattt aacccactga catgtacagt
     1321 gtgagaatgg acaagctcac tctcctgtaa tagcagctat caactaccta agtagaatgc
     1381 caagagaacg aagcacagaa actgtgctca atggttccat ttgtataacg accagagaca
     1441 aagaccagtg caactctctt ctagtgcaga gaaacgctgg gcatcagcaa agtcacagga
     1501 tgctgtggga tggccgcaga ggtgttggca aggctatttc ccgatttgga aaccggtttc
     1561 atttggatgt ctaccttgta aaatggaaca aaatttcctg taatgtatga gctcataacg
     1621 atatttggga atataattgc gaatgaataa aagattttta aaagaaaaaa aaaaaaaaaa
     1681 aaaaaaaaaa aaaaaa
//
