LOCUS       XM_039084703            5947 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus GRB10 interacting GYF protein 2
            (Gigyf2), transcript variant X3, mRNA.
ACCESSION   XM_039084703
VERSION     XM_039084703.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5947
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5947
                     /gene="Gigyf2"
                     /note="GRB10 interacting GYF protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 ESTs, 8 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100362458"
                     /db_xref="RGD:2318130"
     CDS             308..4279
                     /gene="Gigyf2"
                     /codon_start=1
                     /product="GRB10-interacting GYF protein 2 isoform X1"
                     /protein_id="XP_038940631.1"
                     /db_xref="GeneID:100362458"
                     /db_xref="RGD:2318130"
                     /translation="MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYG
                     REEMLALFLKDYKNKDTRCHAWLCLELFNIPFDLLEKEFLPILQEEPLPPLALVPFTE
                     EEQRNFSMSVNSAAVLRLTGRGGGGGTVVGAPRGRSSSRGRGRGRGECGFYQRSFDEV
                     EGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGRPNFEESGPTSVGRKHEFIRSES
                     ENWRIFREEQNGEDEDGGWRLAGSRRDGERWRPHSPDGPRSTGWREHMERRRRFEFDF
                     RDRDDERGYRRVRSGSGSIDDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPI
                     PEEQEMDFRPVEEGEERSDSDSSHNEEAKEPDKTNRRDGEKTDRAGTDANEEVPQTSL
                     SSARPGTPSDHQPQEAAQFERKDEPKAEQMEKAEEESRSENSLPAKIPSRGDETVPAS
                     QQPSTQLPPDTASPLLILSPPLPTPSSASRPVETAAVEAPGMSSVSTEPDDEEGLKHL
                     EQQAEKMVAYLQDSALDDERLTSKLQEHRAKGVSVPLVHEAMQKWYYKDPQGEVQGPF
                     NNQEMAEWFQAGYFTMSLLVKRACDESFQPLGDIMKMWGRVPFSPGPAPPPHMGELDQ
                     ERLTRQQELTALYQMQHLQYQQFLIQQQYAQVLAQQQKAALSSQQQQQLALLLQQFQA
                     LKMRMSDQNIIPSVTRSVSVPDTGSIWELQPAASQPAVWEGGSVWDLPLDTTTPGPSL
                     EQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRRE
                     EEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEEL
                     LRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELELQRQKDLMR
                     QRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTTCQSQATLSLAEIQKLEEE
                     RERQLREEQRRQQRELMKALQQQQQQQQQQKLSGWGNVSKPAGTTKSLLEIQQEEARQ
                     MQKQQQQQQQQQQHQQSNRARNSTHSNLHTSIGNSVWGSINTGPPNQWASDLVSSIWS
                     NADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEEEKLLKLF
                     QGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYTRAYLGDTSE
                     AKEFAKQFLERRAKQKANQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQDSVWGMNHST
                     LHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETL
                     DDY"
ORIGIN      
        1 agctggaggg agtgaggcgg ggatgtaggc gggccgaggg ggcgggtcgg cgcgcggggt
       61 cacgtgacgt gcgtggcgac gtgtcggcca tcttgtgttg ttgaggctga ggattgactt
      121 gggttctgag agactcctgt cccggaccgc agtattaaaa agacctgaag acattgctga
      181 aaacctcttg ctgtgagata gcagaacttt tgaacagcac ctactggcac tatgaaaact
      241 agccatcagg aaggaaaatt tcaggtttct ccacacataa aagatctttt taaaaatacg
      301 gagaagaatg gcagcagaaa cacagacact aaactttggg cctgaatggc tccgtgctct
      361 gtccagtggt gggagtatca catcccctcc tctttctcca gccctgccaa agtataaatt
      421 agcagattat cgatatggcc gagaagaaat gttagcactt ttccttaaag actacaagaa
      481 taaagacacg cgctgccatg cctggctatg tctagagctt tttaatatac cttttgacct
      541 tctggagaaa gaatttctgc ctatcctaca ggaggagccc ttgccgccat tggctctagt
      601 accctttaca gaagaagagc agagaaactt ttccatgtct gtaaatagtg ccgctgtcct
      661 gcgattgaca ggacgaggag gaggaggagg aacagtggtg ggggctccta gaggtcgaag
      721 ttcttcaaga gggcgaggca gaggtagagg tgaatgtggt ttctaccaaa gaagttttga
      781 tgaagtagag ggtgtgtttg ggcgaggagg tggcagggaa atgcatagat cacagagctg
      841 ggaagaaagg ggtgacaggc gctttgaaaa accaggaaga aaagatgtag ggagaccaaa
      901 ttttgaggaa agtggaccaa cgtctgtggg gagaaagcat gaatttatac ggtcagaaag
      961 tgaaaactgg cgaatcttta gagaggaaca aaatggagaa gatgaagatg gaggttggcg
     1021 attagctgga tcaagaaggg atggagagag gtggcggcct cacagtcctg atggccctcg
     1081 ttctacaggc tggcgggaac acatggaacg ccgccggagg tttgagtttg actttcgaga
     1141 tcgagatgat gagcggggct accgaagggt gcgctctggc agtgggagca tagacgacga
     1201 cagggatagc ttgccagaat ggtgtttaga ggatgctgaa gaagaaatgg gcacatttga
     1261 ctcatctgga gcattcctct ctctgaaaaa agtgcagaaa gaacctattc ctgaagagca
     1321 ggaaatggac ttcaggcctg tggaggaagg agaggagcgc tctgactctg acagcagcca
     1381 taatgaagag gccaaggaac cggataagac aaaccggaga gacggggaga agacagacag
     1441 agcagggact gacgctaacg aggaagtacc ccagacgtca ctgtcatctg ctagaccagg
     1501 taccccttca gatcaccagc ctcaagaagc agcacagttt gagaggaaag atgaacccaa
     1561 agctgaacaa atggaaaagg ctgaagaaga gagtcggtca gaaaacagtc tcccagccaa
     1621 gatccccagc agaggggacg aaacggtgcc tgcctcccag caaccctcga cacagcttcc
     1681 tccagacaca gcctctcctc tcctcatcct gtcacctcct cttcctactc ctagttctgc
     1741 ctcacggcca gttgagacag cagctgtcga agctcctggt atgagcagtg tttccacaga
     1801 gccagatgat gaagagggcc ttaaacactt ggaacagcaa gctgagaaga tggtggctta
     1861 tctccaagac agtgcactag atgatgaaag attgacatca aaactgcaag agcacagagc
     1921 taaaggagtg tcagttccac tggtgcacga agcaatgcaa aagtggtatt acaaagaccc
     1981 ccagggggag gtccaaggtc cctttaacaa tcaggagatg gccgaatggt ttcaggcagg
     2041 ctattttact atgtctttgc tggtgaagag agcatgtgat gaaagcttcc agccccttgg
     2101 tgatatcatg aagatgtggg gaagggttcc tttctctcca ggcccagctc cccctcctca
     2161 tatgggagaa ttggaccagg aacgcctgac cagacagcag gaactcactg ccttatacca
     2221 gatgcaacac ctccagtacc agcagttctt aatacaacaa cagtatgcgc aggtcttggc
     2281 tcaacagcag aaagcagctt tgtcatctca gcagcagcag caactggctc ttcttctgca
     2341 acagttccag gctctgaaga tgagaatgtc tgatcagaac atcattccct cagtaactag
     2401 gtctgtgtca gtgccagata ctggctctat ctgggagctt cagccagcag cctcacagcc
     2461 tgcagtttgg gaaggtggta gtgtatggga ccttcctctg gacaccacca caccaggccc
     2521 ttccctggag cagcttcagc agctggaaaa ggccaaagct gcaaagctag aacaggagag
     2581 aagagaggca gaaatgagag caaaaaggga agaggaggag cgaaagaggc aagaggaact
     2641 gcggagacaa caggaggaaa tccttcggag gcagcaggag gaggagagga aaagacggga
     2701 agaggaggag cttgctcgaa gaaagcagga ggaggctctg cgacgccagc gggagcaaga
     2761 gattgcgctg aggcgacaac gagaagagga ggaaagacag caacaggaag aagctcttag
     2821 aagactggag gagcggagga gagaagagga ggaaaggcgg aagcaggaag aactgttacg
     2881 caagcaggaa gaggaggctg ccaaatgggc ccgggaagag gaagaagccc agcgccgact
     2941 ggaagagaac cggctgcgca tggaggagga ggcagccaga cttaggcatg aagaagagga
     3001 acgaaaacgg aaggaactgg agctgcagag acagaaggat ctgatgcgcc agaggcagca
     3061 gcagcaagaa gccctccgaa gactgcagca gcaacagcag cagcagcagc ttgcacaaat
     3121 gaagcttccc tcttcgtcaa cgtggggaca gcagtctaac accacaacat gtcagtccca
     3181 ggccacactg tcattggctg agatccagaa gctggaagaa gaacgagaac gccagcttcg
     3241 agaagagcaa aggcgtcagc agagggaatt gatgaaagct ctccagcagc agcagcagca
     3301 gcagcaacaa cagaaactct caggttgggg gaatgtcagc aaacctgcag gtaccaccaa
     3361 gtctctacta gagatccagc aggaagaggc caggcagatg cagaagcagc agcagcagca
     3421 gcaacagcaa cagcaacacc agcaatcaaa cagagcccgg aacagcacac attccaacct
     3481 gcacaccagc attgggaatt ctgtatgggg ctctataaac acaggtcctc ctaaccagtg
     3541 ggcgtctgat ctagtcagta gtatctggag taatgcagac accaaaaact ccaacatggg
     3601 gttttgggat gatgcagtga aagaggtggg acctagaaat tcaacaaata aaaataaaaa
     3661 caacgccagt ctcagtaaat ctgtaggtgt gtctaaccgg cagaataaga aagtagaaga
     3721 agaagaaaag ttgctgaagc tctttcaggg agtaaataaa gcccaagatg gatttaccca
     3781 gtggtgtgaa cagatgcttc atgcccttaa tacggcaaat aacttggatg tgcccacgtt
     3841 tgtttctttc ttgaaagaag tggagtctcc ttatgaagtc catgactata ccagggccta
     3901 tttaggagat acttctgagg ctaaggagtt tgctaagcag ttccttgagc gccgtgccaa
     3961 acagaaagcc aaccagcagc gtcagcagca gcagcagcag cagcaacagc agcagcagca
     4021 acaacagcag cagcaacaac aacagcagca gcaacagcag caggactctg tctgggggat
     4081 gaaccatagt acactccatt cggtatttca gaccaatcaa agcaacaacc aacaatcaaa
     4141 ttttgaggct gtgcaaagtg gcaagaagaa gaaaaagcag aagatggttc gagcagatcc
     4201 cagtttatta gggttttcag tcaatgcctc gtcagagcga ctgaacatgg gtgagattga
     4261 gactctggat gactactgag tacctgccgc tgtgccagcc ttccctctcc tgcctagtga
     4321 ccatggtttc tcctcattgg acacaacata cgttcactat ttgctctgtc accctgcaac
     4381 aaatcacaga accaatcatc tcaggctttt tttttttcct agccctttgt gtccaagatt
     4441 actctaaatc actgttggtg agcatctcag actgtaccta ggcggaccag acctttgtct
     4501 tgggggtggc agctgggatt gctccccagc agggctaatg ctggcagcac acattcactg
     4561 tgcgttggtt tcatctactg tctcctggaa gtgtgttgga atctgccaat agcagattac
     4621 tttctcttgt cgctcttctt gttctgtttt gttctttctc cccatccctc tggcccaccc
     4681 catacaggca aagggcctta actggtggag tcgtgaagag agttaatggt taatagacat
     4741 gggccagtaa caaacacccc cggacagtaa cttctctatt gccacagaca ggcagaatct
     4801 ctgtctggag gttgcatggc catcagtaac atggggatta catcaaaggc tgtgaggggt
     4861 atagattggc ttgtttggtg ttgctttccc tcactgtttt ttctgaagaa agaattcatg
     4921 tgttcttcat tagatagtga ctttccaagc aagctgtggt cttccctgac atactccaac
     4981 cttactactg gacaaaggaa accctatggc ctgggacagg gacttaattt tcctttcata
     5041 taaaaactga tcccctcctc ctcccataaa tatttttact tcaaaggact aggaccagtt
     5101 tgttttgggc ccttatgtga aaatttgtct cgtttaagag gcatctttac catatgtatg
     5161 aatttgtgta atttcaacta agatagggat aaaaactttt gcttctgatg aaagctggga
     5221 atttcacctg ttcctcagag caccgtgtgc atgtttttcc gtggccctga aaaggtcttg
     5281 tggatcaatt ctgggatggc aagttgcttg ccttttctga aaagagaatg tacaaagcct
     5341 gaccatcttt aagaccttca tccgtggaca ccactgtgca ggaggatgca gtggggtgtg
     5401 gggatgggca gcacaggagc aggaagccag ctccacactt ccacagctag tccaagtgtg
     5461 ctcaagctct gtagaagcag gctctgcctc tgcgccacgc ctggcgaaca tcacctggga
     5521 tagtctaaca ccttggcggc agctgtgggt cggctgtgcc tgtgcaagag gcgcacgcgg
     5581 tggtgggcag ctcagcctcg gtgcctgggc aaggctgggg ttgctctgag agcagttcag
     5641 tattggaaga ttatatttgg tttctatttt tattgttttg gatcaccatt ctccctatcc
     5701 cttcttacct ctccctccta aacgtgtaca atagctatac agagactgct acaaacttgt
     5761 aaatagtttt tggatcaaat agcataagga gatagggaac cattaaaatg tgagacttct
     5821 ctcctttgct ttgtaaattc aaaagggggg tggggaagag ggatagttaa atgtttacaa
     5881 aaatttaagc tccctcggaa cttttgccag tgtggaggaa aataaaaaaa aaaaaaaaaa
     5941 acttaaa
//
