LOCUS       NM_001004273            2768 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus gametogenetin binding protein 2 (Ggnbp2), mRNA.
ACCESSION   NM_001004273 XM_006220760 XM_008775213 XM_340865
VERSION     NM_001004273.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2768)
  AUTHORS   Li,S., Moore,A.K., Zhu,J., Li,X., Zhou,H., Lin,J., He,Y., Xing,F.,
            Pan,Y., Bohler,H.C., Ding,J., Cooney,A.J., Lan,Z. and Lei,Z.
  TITLE     Ggnbp2 Is Essential for Pregnancy Success via Regulation of Mouse
            Trophoblast Stem Cell Proliferation and Differentiation
  JOURNAL   Biol Reprod 94 (2), 41 (2016)
   PUBMED   26764350
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Zhang,J., Wang,Y., Zhou,Y., Cao,Z., Huang,P. and Lu,B.
  TITLE     Yeast two-hybrid screens imply that GGNBP1, GGNBP2 and OAZ3 are
            potential interaction partners of testicular germ cell-specific
            protein GGN1
  JOURNAL   FEBS Lett 579 (2), 559-566 (2005)
   PUBMED   15642376
REFERENCE   3  (bases 1 to 2768)
  AUTHORS   Ohbayashi,T., Oikawa,K., Iwata,R., Kameta,A., Evine,K., Isobe,T.,
            Matsuda,Y., Mimura,J., Fujii-Kuriyama,Y., Kuroda,M. and Mukai,K.
  TITLE     Dioxin induces a novel nuclear factor, DIF-3, that is implicated in
            spermatogenesis
  JOURNAL   FEBS Lett 508 (3), 341-344 (2001)
   PUBMED   11728448
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001004273.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY633742.1, SRR26643297.35221.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-337               JAXUCZ010000010.1  70239947-70240283   c
            338-418             JAXUCZ010000010.1  70231018-70231098   c
            419-672             JAXUCZ010000010.1  70229580-70229833   c
            673-771             JAXUCZ010000010.1  70227188-70227286   c
            772-885             JAXUCZ010000010.1  70223082-70223195   c
            886-1089            JAXUCZ010000010.1  70215913-70216116   c
            1090-1264           JAXUCZ010000010.1  70214808-70214982   c
            1265-1459           JAXUCZ010000010.1  70214528-70214722   c
            1460-1607           JAXUCZ010000010.1  70213340-70213487   c
            1608-1882           JAXUCZ010000010.1  70212055-70212329   c
            1883-2131           JAXUCZ010000010.1  70210683-70210931   c
            2132-2768           JAXUCZ010000010.1  70208950-70209586   c
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..2768
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /note="gametogenetin binding protein 2"
                     /db_xref="GeneID:360584"
                     /db_xref="RGD:1302978"
     exon            1..337
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     CDS             245..2335
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /note="zinc finger protein 403"
                     /codon_start=1
                     /product="gametogenetin-binding protein 2"
                     /protein_id="NP_001004273.1"
                     /db_xref="GeneID:360584"
                     /db_xref="RGD:1302978"
                     /translation="MARLVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLD
                     GHQNNGAQLKQFIQRHSMLKQQDLSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQ
                     LVESGNPALEPLTVGPKGVLSLTRSCMTDAKKLYTLFYVHGSKLNDMIDAIPKSKKNK
                     RCQLHSLDTHKPKPLGGCWMDVWELMSQECRDEVVLIDSSCLLETLETYLRKHRFCTD
                     CKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAE
                     PEFAGGRRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDA
                     LRKSFEMTVEKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKCVCDSPAS
                     LHTADEKAVSQEKETDFMENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGSP
                     KIKKGMSPHCNGSDCGYSSSMEGSETGSREGSDVACTEGICNHDEHGEDPCVHHCEDK
                     EDDGDSCVECWANSEENNTKGKNKKKKKKSKMLKCDEHIQKLGSCITDPGNRETSGNT
                     MHTVFHRDKTKDAHPESCCSTEKGGQPLPWFEHRKNVPQFTEPTEMSFGPDSGKGAKS
                     LVELLDESECTSDEEIFISQDEIQSFMANNQSFYSNREQYRQHLKEKFNKYCRLNDHK
                     RPVCSGWLTTAGAN"
     exon            338..418
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            419..672
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            673..771
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            772..885
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            886..1089
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            1090..1264
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            1265..1459
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            1460..1607
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            1608..1882
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            1883..2131
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
     exon            2132..2768
                     /gene="Ggnbp2"
                     /gene_synonym="Zfp403; Znf403"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcgcgtgt ggaatcgggt gatgggaaac gcagcgcggc tctcccgtcc ttcttgctcc
       61 gcgccccccc acccctttcc cccgtggcga atgtgctgcg aggtggcggg tgcttacgct
      121 cgcggggttt ggctgttgca ggcaggagct gggaggaggc agcagcggca ggagcagcag
      181 cggcggcggc agcagcggca gctgggagga ggtggtgacg gtggcaacgg cagcgtcggg
      241 aacgatggcg cgactggtgg cagtgtgcag ggacggggag gaggagttcc ccttcgagag
      301 gaggcagatt cccctctaca tagacgacac tctcacgatg gtgatggaat ttcctgacaa
      361 tgttttaaat cttgatgggc atcagaataa tggtgcacaa ctaaagcagt ttattcagcg
      421 acatagtatg cttaagcaac aagatttaag tattgccatg gtggtaacat cacgtgaagt
      481 cttgagtgca ctttctcagc ttgtcccatg tgttggttgt cgtcgcagtg tggaacgcct
      541 cttttctcag cttgtagagt ctggaaatcc tgcccttgaa cccctgacag tagggcccaa
      601 gggagtacta tctttgactc gaagctgcat gactgatgca aaaaagcttt atacattatt
      661 ttatgtacat gggtccaaac taaatgatat gatagatgct attccaaaaa gtaagaagaa
      721 caagagatgt cagttacact ctttagatac acacaaacct aaacctttgg gaggatgttg
      781 gatggatgtt tgggaactaa tgtcccagga atgcagggat gaagtagttt taattgactc
      841 tagttgtctt ttagaaacac tagaaacgta tcttcgaaag cacaggtttt gcactgattg
      901 caaaaataaa gtcctccgag catacaatat cctcattggc gaacttgact gcagcaaaga
      961 gaagggctac tgtgctgccc tttatgaagg cttgcggtgc tgtccgcatg agcgacacat
     1021 acatgtttgc tgtgaaacag acttcattgc acatctcttg ggtcgtgctg agccagagtt
     1081 cgcaggaggg cgacgagaaa gacatgctaa gacaatagat atagctcaag aagaggttct
     1141 cacttgcttg gggattcatc tttatgaacg actgcatcga atctggcaaa aactacgggc
     1201 ggaagagcag acgtggcaga tgctctttta tcttggtgtt gatgctttac gtaagagctt
     1261 tgaaatgact gtggaaaaag tgcagggtat tagccgcttg gaacaacttt gtgaggaatt
     1321 ttcagaggaa gaacgagtta gagaactcaa gcaagaaaag aaacgccaaa aacggaagaa
     1381 cagacgaaaa aataagtgtg tgtgtgatag tcctgcttcc ttacacacag cagatgagaa
     1441 agcagtaagc caagaaaagg aaacagactt catggaaaat agctgcaaag cctgtggcag
     1501 cactgaagat ggtaatactt gtgtagaagt aattgttacc aatgaaaata catcatgtac
     1561 ttgtcctagc agtggcaatc ttttggggtc ccctaaaata aagaaaggca tgtctccaca
     1621 ctgtaacggc agtgattgtg gatattcatc tagcatggaa ggaagtgaga caggttctcg
     1681 ggaaggttca gatgttgcct gcaccgaggg gatttgtaac catgatgaac atggtgaaga
     1741 tccctgtgtc catcactgtg aagacaaaga agatgatggt gacagttgtg ttgaatgttg
     1801 ggcaaattct gaagaaaata acacaaaagg aaaaaataaa aagaagaaaa agaaaagcaa
     1861 gatgttgaaa tgcgatgaac atatccaaaa acttggaagc tgtattacag atccaggtaa
     1921 tcgagagacc tcaggaaaca ccatgcacac agtgtttcac cgtgacaaga ccaaagatgc
     1981 acatcctgag agttgttgca gcactgagaa gggtgggcag ccattgcctt ggtttgagca
     2041 taggaaaaac gtaccacagt tcacagaacc tacagaaatg tcatttggtc ctgactctgg
     2101 aaaaggtgcc aagagcttag ttgaacttct tgatgagtct gaatgtactt cagatgagga
     2161 aatctttatc tcacaagatg aaatacagtc atttatggct aataaccagt ctttctacag
     2221 caatagagaa caataccgac agcatctgaa ggagaaattt aataaatact gccgcttaaa
     2281 tgaccacaag aggcccgttt gtagtggctg gctgacaacg gctggagcaa attaaataaa
     2341 taaaatagct ctgtctttca atgaaacact caagatgact actgcgcctt ctcttttaaa
     2401 aactcctaat ttagtgactt ctggcaaaat tttaccttaa atcttaaatc aatgtgattc
     2461 cttgttttgg gagacggtgg aggtaacctc attcgtttgt tctttcttca ggcttgtgtc
     2521 tttagttgcg tggctacgca ggcctgccta tgatttaagc catctcttca ttaaacgttt
     2581 ctcttcctgt gagacttact aaagcaactt agtggcaaaa gtaatgttgt acttacactt
     2641 ctgtacagaa atgacagtga gctggatata tggtttacag tagacatcca cttgcaaagc
     2701 gtctggacaa aatgttaaag gcaatgtgca aaatttaaaa taaagagtat ttattaatac
     2761 gcatagta
//
