LOCUS       XM_039094062            2395 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus golgi-associated, olfactory signaling
            regulator (Gfy), transcript variant X1, mRNA.
ACCESSION   XM_039094062
VERSION     XM_039094062.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094062.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2395
                     /gene="Gfy"
                     /note="golgi-associated, olfactory signaling regulator;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     7 samples with support for all annotated introns"
                     /db_xref="GeneID:100910047"
                     /db_xref="RGD:6500406"
     CDS             614..2140
                     /gene="Gfy"
                     /codon_start=1
                     /product="Golgi-associated olfactory signaling regulator"
                     /protein_id="XP_038949990.1"
                     /db_xref="GeneID:100910047"
                     /db_xref="RGD:6500406"
                     /translation="MQPFSPIFFFLLFLLDGLSSRAAPSASLPVGPDLQGMLPPSGMP
                     AGALENVTRDQPTPGYSAASPPEHSRTPPSASPHGSVKNLQETPRPNLSLSLETPMPD
                     QLTSVAESQGTSQMSPSTATLAKPSETPKPNLTGSSQSESSETPKPNPSNTSLSESPE
                     TVHNDPTPALHHESPEISKGDTPKLSAGGGPKIPSPSPTQFLSPKSLETYDPGATRNL
                     NSALLPITYLDPTESPRSAFLTTHNSNPTDTPQTQFPPAPSQNVTEIAVTSDSETTSS
                     LPTQPTTFREEATTPSEPGLSPSPEVPTASRVATPGLSTSDSLGTKELHVPQNSGPKG
                     PDIPLPSARIAGPPAPLEHPNQVAPAVPQAPERHSRGDTVNTIIVVERVKETGMTLVS
                     RPRGSVGGALCLFFAGTGMLIGIFLLLWCLYRRASRHRSFAHHRLQNSGDEPVLHLDA
                     PKDPLDLYFYAPDAWVPSHIATQQPPPTPPLPPKLPPPPRGPQRLEALSPAALSPNFV
                     "
ORIGIN      
        1 gtgtgtgtat atttgattgg ttggatttta tttctgcttt agagttgctg tagctcaagc
       61 tgtcttgggt ctcactatgt cacccaagct ggctttgaac tcataaccct ctgcctccac
      121 cttccaagag cagggatcat aggcctatac catcatacca ggccaaactg tggctgaaaa
      181 gaggtcatag cttgcttcaa tcctaacttc cttttctacc catccatgag gtcctgtgtt
      241 tctgtccctt taagtatctc agcctgttgc taggctctca ggattcccca gggaggggac
      301 caggtgcgtc acctgtcacc tgtgtgcctc tgggacccta gtgcctgttc cttccagcgc
      361 cattgccatt cggcagcact ccctgcctac ctctttgttg agagctgatc atctgccctt
      421 gtcttggaca tcactgaaca gtttttcagg gaccccactg ggaaacgtac taccactccc
      481 aggaatccct gagctcctgt atccttggtg accggttacc atcccacagc ctccagggag
      541 ttgctgttgg cctttgccag ggtccctgga cagatctggt ctttctggga gccgctataa
      601 gcacctcaga atcatgcagc ccttcagccc catcttcttc ttcctcctct ttctccttga
      661 tggtctgagt tccagggcag ctccctcagc ctctctgcct gtgggccctg atctccaggg
      721 gatgctcccg ccttctggga tgcccgctgg tgctctagaa aatgtcacta gagatcaacc
      781 taccccagga tactctgcag ccagtcctcc tgagcactcc cggacaccgc cctcagcttc
      841 ccctcacggc tccgtaaaaa acttacagga gacccccaga cccaacctct ccctttctct
      901 agagactccc atgcccgacc agctcacctc agtagcagaa tcccagggta cttcacaaat
      961 gagcccctcg acagcaacac ttgctaaacc ttctgagacc cccaaaccaa acctgactgg
     1021 aagttcccag tctgaatctt ctgaaacccc caaacctaat ccctccaaca cctcactctc
     1081 agaatctcct gagactgtac acaatgaccc cacaccagct ctacaccatg aatcccctga
     1141 aatctccaaa ggagataccc ccaaactctc agctggtgga gggcccaaga taccaagtcc
     1201 tagccccacc caattcctca gccccaaatc cctagagacc tatgaccctg gtgccaccag
     1261 aaacctaaat tctgcattac taccaatcac ctaccttgac cctacagaaa gtccacggtc
     1321 agcctttctc accacccaca actccaatcc cactgacacc ccccaaacac aattcccccc
     1381 agcccccagc caaaatgtaa cagagatcgc tgtgacctct gactcggaaa ccacctctag
     1441 tcttcccacc caaccaacaa ccttcaggga ggaagccacc actcccagtg aaccaggctt
     1501 gagtcccagc ccagaagtgc ctacagccag ccgagttgcc acccctggcc tgtccacctc
     1561 agattcccta gggaccaaag agctacatgt tccccagaac tcaggcccta aagggccaga
     1621 tatccctctt ccctcagcac ggattgcagg accccctgct cctctagagc accccaatca
     1681 ggtagcccct gccgtgcctc aggcccctga gagacacagc cgaggagaca cagtcaatac
     1741 tatcatcgtg gtggagcgag tgaaagagac cgggatgact ctggtcagcc gcccacgagg
     1801 ctccgtcggt ggggctctgt gcctgttctt cgcggggaca gggatgctga ttggcatctt
     1861 cctcttgctg tggtgcctct accgccgggc atccagacac aggtcctttg cacaccaccg
     1921 gctccagaac agcggagatg aaccagtctt gcacctggat gccccgaagg acccgttgga
     1981 tctctacttc tacgcccccg atgcgtgggt gccctcgcac atcgccacgc agcagccacc
     2041 tcccacccct ccgctgccgc ccaagctgcc ccctccgcct cgcgggccgc agcgccttga
     2101 agccctgtcg ccggccgcgc tgtcccccaa cttcgtctga cgaccgagct gcagacccgg
     2161 cccagcttca acgcctagag ggaccccaga gccaggcaga acttcccaat aaaccacctc
     2221 gcccactgga atctgtgcct gagtgcttgg tggaggggcc gaggggaccc ggggtccaga
     2281 ggagcgagga ggagagacaa aaactgaggt ccagggcagt ggcggagagc tggggtccag
     2341 actaaagcaa gggggaaacc gggatctgca cacctgggcc ggagggacga gggct
//
