LOCUS       NM_001100665            3205 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus GTP dependent ribosome recycling factor
            mitochondrial 2 (Gfm2), mRNA; nuclear gene for mitochondrial
            product.
ACCESSION   NM_001100665 XM_002725914 XM_226707
VERSION     NM_001100665.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3205)
  AUTHORS   Tsuboi,M., Morita,H., Nozaki,Y., Akama,K., Ueda,T., Ito,K.,
            Nierhaus,K.H. and Takeuchi,N.
  TITLE     EF-G2mt is an exclusive recycling factor in mammalian mitochondrial
            protein synthesis
  JOURNAL   Mol Cell 35 (4), 502-510 (2009)
   PUBMED   19716793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On or before Sep 1, 2012 this sequence version replaced
            XM_002725914.2, XM_226707.7.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643295.7720.1,
                                           SRR26643292.7317.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-79                JAXUCZ010000002.1  30184123-30184201
            80-163              JAXUCZ010000002.1  30187825-30187908
            164-248             JAXUCZ010000002.1  30188823-30188907
            249-306             JAXUCZ010000002.1  30190992-30191049
            307-404             JAXUCZ010000002.1  30191770-30191867
            405-530             JAXUCZ010000002.1  30194468-30194593
            531-619             JAXUCZ010000002.1  30195439-30195527
            620-708             JAXUCZ010000002.1  30198607-30198695
            709-769             JAXUCZ010000002.1  30200628-30200688
            770-949             JAXUCZ010000002.1  30200892-30201071
            950-1030            JAXUCZ010000002.1  30205656-30205736
            1031-1179           JAXUCZ010000002.1  30206569-30206717
            1180-1320           JAXUCZ010000002.1  30207626-30207766
            1321-1420           JAXUCZ010000002.1  30207850-30207949
            1421-1607           JAXUCZ010000002.1  30208619-30208805
            1608-1684           JAXUCZ010000002.1  30211007-30211083
            1685-1823           JAXUCZ010000002.1  30212598-30212736
            1824-2003           JAXUCZ010000002.1  30214492-30214671
            2004-2119           JAXUCZ010000002.1  30214922-30215037
            2120-2302           JAXUCZ010000002.1  30217036-30217218
            2303-3205           JAXUCZ010000002.1  30217826-30218728
FEATURES             Location/Qualifiers
     source          1..3205
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q12"
     gene            1..3205
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /note="GTP dependent ribosome recycling factor
                     mitochondrial 2"
                     /db_xref="GeneID:294672"
                     /db_xref="RGD:1309854"
     exon            1..79
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            80..163
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     CDS             101..2440
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /note="RRF2mt; EF-G2mt; mEF-G 2; G elongation factor,
                     mitochondrial 2; elongation factor G 2, mitochondrial"
                     /codon_start=1
                     /product="ribosome-releasing factor 2, mitochondrial"
                     /protein_id="NP_001094135.1"
                     /db_xref="GeneID:294672"
                     /db_xref="RGD:1309854"
                     /translation="MFTNWRIFAVNRQKTFSVHIHTTCYCKIKANLKRSKTQVPLTRS
                     YSSPPGIVGNEVKSLHSIINPPVAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGD
                     VDDGDTVTDFMAQERERGITIQSAAVTLDWKGYRVNLIDTPGHVDFTLEVERCLRVLD
                     GAVAVFDASAGVEAQTLTVWRQADKHKIPRICFLNKMDKTGASFNYAVESIREKLKAK
                     PLILQLPIGEARTFQGVVDVVNREKLIWNSDSDDGKDFERKPLSEASDPTLLKETVEA
                     RNSLIEQVADLDDEFADLVLGEFSEDFDLVPAEKLQAAIHRVTLAQAAVPVLCGSALK
                     NKGVQPLLDAVTTYLPSPEEREHGFLQWYKGDLCALAFKVLHDKQRGPLVFLRIYSGT
                     LTPQSAVHNVNRNCTERMSRLLLPFADQHVEIPSLTAGNIALTVGLKQTATGDTIVSS
                     KSSALAAARRAGKGERKPGRISEAESVLLAGVEIPEPVFFCTIEPPSAAKQPDLDHAL
                     EHLQREDPSLKVKLDPDSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYRET
                     ILNSVRATDTLDRVLGDKRHFARAELEVRPAEEPCGVATIEYADSVGEDLLQAPREDI
                     ENAVHSACLQGPLLGSPIQDVAVTLHSLMIHPGTSTTMVTACISRCVQKALKKADKQV
                     LEPLMSLEVTVSREYLSPVLADLAQRRGNIQEIQTRQDNKVVLGFVPLAEIMGYSTVL
                     RTLTSGSATFALELSTYQAMSPQDQRTLLSQRSGLARML"
     exon            164..248
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            249..306
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            307..404
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            405..530
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            531..619
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            620..708
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            709..769
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            770..949
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            950..1030
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            1031..1179
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            1180..1320
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            1321..1420
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            1421..1607
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            1608..1684
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            1685..1823
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            1824..2003
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            2004..2119
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            2120..2302
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
     exon            2303..3205
                     /gene="Gfm2"
                     /gene_synonym="RGD1309854"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agctgacgta ccaccggaac tggaggcgga ggctgcctat ggcgcttgaa atcgggatac
       61 gcgtagcttc ttcctgcgga gaggattgta gaagaccaca atgtttacca actggaggat
      121 ttttgcagtg aatcgtcaga aaacgttcag tgtgcacatt cataccacgt gttactgtaa
      181 aataaaagct aatttaaaaa gatcaaagac tcaggtgcct cttacaagaa gctacagttc
      241 cccaccaggc attgtaggaa atgaagtcaa atctcttcat tccatcatta acccccctgt
      301 ggccaaaatc cgtaatattg gaattatggc ccatattgac gcaggcaaaa ccaccaccac
      361 agagaggatt ttgtactatt ccggatacac aagatcactg ggagatgtcg atgatgggga
      421 cacagtgacg gatttcatgg ctcaagagcg agaaaggggc attaccatcc aatcagcagc
      481 cgtgactctt gactggaaag ggtatagagt caacctgatt gatacgccag gtcacgtaga
      541 ctttaccctg gaggttgagc gctgcttgag ggtgttggat ggtgcggtgg ccgtgtttga
      601 tgcctctgct ggtgtggagg ctcagactct cactgtatgg aggcaagctg acaaacacaa
      661 gataccccgg atctgctttc taaacaagat ggacaagact ggagcaagtt ttaactatgc
      721 agttgaaagc atcagggaga agttaaaggc aaagcccctg attttacagc tgccaattgg
      781 ggaagccagg actttccaag gagtggtgga tgtggtaaac agagaaaagc ttatttggaa
      841 ctctgactct gatgacggaa aagacttcga gagaaagccc ctctcagaag cgagcgatcc
      901 gacattgcta aaggagacag tcgaagcaag gaactcccta attgagcaag ttgcagatct
      961 agatgatgaa tttgctgact tggttttagg tgaatttagt gaagattttg atttggtgcc
     1021 agctgaaaag ctacaggctg caatacacag agtgacactg gctcaggctg cagtgcccgt
     1081 gctgtgtggg agtgccttga aaaacaaggg cgttcagcct ctgctggatg ctgtgaccac
     1141 ttacctgcca tcacctgagg agcgtgagca cgggtttctg cagtggtata aaggagactt
     1201 gtgtgcactg gcatttaaag tgctgcatga taaacagcga ggacccctgg ttttcctgcg
     1261 catttactcg ggtacactga cgccccagtc ggctgtccat aacgttaata gaaactgcac
     1321 ggaaagaatg agtcgtctgc ttctgccatt tgctgaccaa cacgtagaga tcccttccct
     1381 gacggctggt aacattgctt tgacagttgg gcttaaacag actgccactg gagacaccat
     1441 agtctcgtcc aagtctagcg ctttagctgc agctcgcaga gccggaaaag gagagaggaa
     1501 gcctggaagg atcagtgaag cagagagtgt actgttggcc ggcgtggaga tcccagagcc
     1561 tgtcttcttc tgcaccatag aacccccatc agccgctaag cagccagatt tggatcatgc
     1621 cttggaacac cttcagcgtg aagaccccag tttgaaagtc aaacttgacc ctgactctgg
     1681 acaaactgtc ctgtgtggta tgggggagtt acatattgag attattcatg accgtatcaa
     1741 gagggagtat ggcctagaga cctacctagg acctctgcag gtggcatacc gggaaaccat
     1801 cttaaactca gttcgtgcca cagataccct tgatagagtg ctaggagaca agcggcattt
     1861 tgcgagagca gagctggaag tccggccagc agaagagccg tgtggtgtgg ccacgattga
     1921 gtacgctgac tctgtgggtg aagacctgct gcaggcccct cgggaggaca ttgaaaatgc
     1981 cgtccatagt gcatgcctcc aaggaccttt acttggctcc ccaatccagg atgtggcagt
     2041 gacattacac tcactgatga ttcatcctgg cacctccaca actatggtca ctgcctgcat
     2101 ctcacggtgt gtgcagaagg ccctgaagaa agctgacaag caggtgctgg aacctctgat
     2161 gagtcttgag gtcacagtga gtagagagta cctcagccct gtcctggccg atttggcaca
     2221 aagaagaggg aacattcagg aaattcagac tcgccaagac aacaaagttg ttctaggatt
     2281 tgttccttta gcagaaatta tgggatattc aactgtgctt cgaaccctga catcaggctc
     2341 agctactttt gccttggagc tgtctactta tcaagccatg agtccacaag accaaaggac
     2401 tctgctcagc cagagaagtg gtttggcccg tatgctgtag gcccttggaa acggggaaag
     2461 ctgggcactt gccagcttca ttctcagtga gaatgctgtt ctattaactg gctggtaaac
     2521 tgctgcttcg ccctgtggaa agaacttgaa caagacatgg aagaatggca ttggagctgc
     2581 catcctaaga ctgttgaacc tgctctgctg taacgcacca cggctgggcc ctggttgtct
     2641 ctcacctctc tggtgcggtg ataaaataac ccagtcaggg cagcttataa aagggtttct
     2701 tttctcaaca ggaagctgag atagtccttc tttaacctca agcacagagt agagtgtaga
     2761 ctagatgtag ggccaggcag tgaattctcc aagttcacct agtgatgaac ttcctcaggc
     2821 tacgccacct aaactcccca aacagcacgc tccctgggaa ccaagagtct tttgcctaca
     2881 tggaggcctg gtgcctgtgg aggtcagatg tagatgttat gcctctcccc caccaaactg
     2941 gaattatggt gtggttatga agaactgaac tctggtcctc tgcaggaaca agtgttctta
     3001 aatacttgag ccttctttct ggcccaccat ttctcattta accattgcag tgatgagagt
     3061 accatgcagt gctggagttc tgagtagtag tgcaaagctt tttcttttat tttttttaag
     3121 ctgctcacat aaaagatgtc agtattcagt gtttgattca gatatagaaa gattcaatca
     3181 ataaaaagat agtttattta aaaaa
//
