LOCUS       NM_001163320            2091 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus guided entry of tail-anchored proteins factor 4
            (Get4), mRNA.
ACCESSION   NM_001163320 XM_001074468 XM_213726
VERSION     NM_001163320.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Mock,J.Y., Xu,Y., Ye,Y. and Clemons,W.M. Jr.
  TITLE     Structural basis for regulation of the nucleo-cytoplasmic
            distribution of Bag6 by TRC35
  JOURNAL   Proc Natl Acad Sci U S A 114 (44), 11679-11684 (2017)
   PUBMED   29042515
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Topalidou,I., Cattin-Ortola,J., Pappas,A.L., Cooper,K.,
            Merrihew,G.E., MacCoss,M.J. and Ailion,M.
  TITLE     The EARP Complex and Its Interactor EIPR-1 Are Required for Cargo
            Sorting to Dense-Core Vesicles
  JOURNAL   PLoS Genet 12 (5), e1006074 (2016)
   PUBMED   27191843
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2091)
  AUTHORS   Mock,J.Y., Chartron,J.W., Zaslaver,M., Xu,Y., Ye,Y. and
            Clemons,W.M. Jr.
  TITLE     Bag6 complex contains a minimal tail-anchor-targeting module and a
            mock BAG domain
  JOURNAL   Proc Natl Acad Sci U S A 112 (1), 106-111 (2015)
   PUBMED   25535373
REFERENCE   4  (bases 1 to 2091)
  AUTHORS   Wang,Q., Liu,Y., Soetandyo,N., Baek,K., Hegde,R. and Ye,Y.
  TITLE     A ubiquitin ligase-associated chaperone holdase maintains
            polypeptides in soluble states for proteasome degradation
  JOURNAL   Mol Cell 42 (6), 758-770 (2011)
   PUBMED   21636303
REFERENCE   5  (bases 1 to 2091)
  AUTHORS   Mariappan,M., Li,X., Stefanovic,S., Sharma,A., Mateja,A.,
            Keenan,R.J. and Hegde,R.S.
  TITLE     A ribosome-associating factor chaperones tail-anchored membrane
            proteins
  JOURNAL   Nature 466 (7310), 1120-1124 (2010)
   PUBMED   20676083
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On or before Jul 19, 2009 this sequence version replaced
            XM_213726.4, XM_001074468.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582424.1504316.1,
                                           SRR22399484.816236.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-271               JAXUCZ010000012.1  20507635-20507905   c
            272-350             JAXUCZ010000012.1  20498375-20498453   c
            351-432             JAXUCZ010000012.1  20497988-20498069   c
            433-582             JAXUCZ010000012.1  20497285-20497434   c
            583-721             JAXUCZ010000012.1  20495227-20495365   c
            722-862             JAXUCZ010000012.1  20493856-20493996   c
            863-938             JAXUCZ010000012.1  20493699-20493774   c
            939-1011            JAXUCZ010000012.1  20493507-20493579   c
            1012-2091           JAXUCZ010000012.1  20490861-20491940   c
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q11"
     gene            1..2091
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /note="guided entry of tail-anchored proteins factor 4"
                     /db_xref="GeneID:288518"
                     /db_xref="RGD:1311660"
     exon            1..271
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /inference="alignment:Splign:2.1.0"
     CDS             108..1100
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /note="conserved edge expressed protein; golgi to ER
                     traffic protein 4"
                     /codon_start=1
                     /product="Golgi to ER traffic protein 4 homolog"
                     /protein_id="NP_001156792.1"
                     /db_xref="GeneID:288518"
                     /db_xref="RGD:1311660"
                     /translation="MAAAAAAAAMAEQEGARNGARNRGGVQRVEGKLRASVEKGDYYE
                     AHQMYRTLFFRYMSQSKHAEARELMYSGALLFFSHGQQNSAADLSMLVLESLEKAEVD
                     VADELLENLAKVFSLMDPNSPERVAFVSRALKWSSGGSGKLGHPRLHQLLALTLWKEQ
                     NYCESRYHFLHSTDGEGCANMLVEYSTARGFRSEVDMFVAQAVLQFLCLKNKNSALVV
                     FTTYTQKHPSIEDGPPFVQPLLNFIWFLLLAVDGGKLAVFTVLCEQYQPSLRRDPMYN
                     EYLDRIGQLFFGVPPKQTSSYGGLLGNLLSSLMGSSEQEEGEESQDDSSPIELD"
     exon            272..350
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /inference="alignment:Splign:2.1.0"
     exon            351..432
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /inference="alignment:Splign:2.1.0"
     exon            433..582
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /inference="alignment:Splign:2.1.0"
     exon            583..721
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /inference="alignment:Splign:2.1.0"
     exon            722..862
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /inference="alignment:Splign:2.1.0"
     exon            863..938
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /inference="alignment:Splign:2.1.0"
     exon            939..1011
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /inference="alignment:Splign:2.1.0"
     exon            1012..2091
                     /gene="Get4"
                     /gene_synonym="Cee; RGD1311660"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttcctcgcgg ccaccgtaga aggagtgcgg cagccgcagg gacggaagcc gcgaggcgcc
       61 gccgaccgcg cctgcgacag cgtcagctct gcgcggaacg ccggcccatg gcggcggcgg
      121 cggcggcggc ggcgatggca gagcaggagg gcgcccgcaa cggcgcccgc aaccgtggtg
      181 gcgtccagcg cgtggagggc aagctgcgtg ccagcgtcga aaagggcgac tactacgagg
      241 cgcaccagat gtaccggacc ctcttcttca ggtacatgtc tcagagcaaa catgcagagg
      301 cccgagagct catgtactca ggagcactgc tcttcttcag tcatggccag cagaacagtg
      361 cggctgacct gtccatgctg gtcctcgaat ccctggaaaa ggctgaggtg gacgtagctg
      421 atgagctttt ggaaaatctg gctaaagtgt tcagtttgat ggatccaaat tctcctgaga
      481 gggtggcttt tgtgtccaga gccctgaagt ggtccagtgg aggttctggg aaactgggcc
      541 atcctcggct ccaccagctg ctggccctca cgctgtggaa agagcaaaac tactgtgagt
      601 cccggtatca ctttctgcac tccactgatg gtgagggctg tgccaacatg ctggtcgagt
      661 actctactgc ccgaggcttc cgaagtgagg tggacatgtt tgtggctcag gctgtgctac
      721 agtttctctg tttgaaaaat aagaacagtg cattagtggt ctttacgacg tacacacaga
      781 agcacccatc catcgaggat gggccgccct tcgtccaacc cctgctcaat ttcatctggt
      841 ttctgctgct ggctgtggac ggtggcaagc tggctgtgtt cacagtgctg tgcgagcagt
      901 accagccgtc cctgcggagg gaccccatgt acaacgagta cctcgacagg atcggacaac
      961 tcttcttcgg tgtgccgcca aagcagacat cctcctatgg aggcttgcta gggaacctgc
     1021 tgagcagcct catgggctcc tcagagcagg aagaagggga agagagccag gatgacagca
     1081 gccccatcga actggactga agctgcctgg ccagcgtgga atgtccatgg ccagcaccgc
     1141 tgggacggat tcagtgccag gctgggcacg aggcccctta ccagtgggct cctgctctgt
     1201 ggctgaaggg gccacctatg cagagtctgt ccctatttat gtatggtggt tgagggctgt
     1261 gtggccagga ccaagagcaa ggcccagctc ctgctgggca accgtgttcc tttagatcac
     1321 ccacaataaa gcgcaggcct tgctgcagca ccccgctgcc gtccttgtct ctggttcctt
     1381 ggggagggct gcagggtgac atagcagcct ggcgtcagtg actggtaatc cttctcctgt
     1441 gtccagtgca gccatggcat gccagaggag tggtggctgc tgctgtgagc cacgtaggag
     1501 cctgagtcct gcagaggaga gcggctttct tgtttgtttg atttttgttt ggacacagtt
     1561 tgtttgtttt gcaatcatgg tgtgcttccc agggacagag cgtgagctgt ggtgactagg
     1621 ctccttggag gtcacaaaca gctggccagg gtcacgtccc ttggtccatg gggctgtggc
     1681 ccctactgta gtctgtggac tcctccattc aagctgcagc cctgctggtc ccttgagctc
     1741 cgtgctgctg ctctgcagag gttttttaaa gggtgccgta ggttttcacg tccttcatgt
     1801 tgcagtattt atttttactg ggtgagggat ttttcaactt aacgttttag gacttaacca
     1861 aataaccagt ccttgagtaa gcaaccccgt taccacagat aatatccacg ctaccaatct
     1921 gattataaag ggagacactt tattttttca caattaaata agaattgtag attaatacac
     1981 ctctatcttg catgggaagg agggaaatat gcgttattta ctgtaaaaaa aatggaattt
     2041 aaaggaaggc ttgtgtcacc ttttgactat aaataaatcc tttctactgg a
//
