LOCUS       XM_006229796            3313 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glycerophosphodiester
            phosphodiesterase domain containing 4 (Gdpd4), transcript variant
            X1, mRNA.
ACCESSION   XM_006229796
VERSION     XM_006229796.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006229796.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006229796.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3313
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3313
                     /gene="Gdpd4"
                     /note="glycerophosphodiester phosphodiesterase domain
                     containing 4; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:680990"
                     /db_xref="RGD:1585799"
     CDS             102..2321
                     /gene="Gdpd4"
                     /codon_start=1
                     /product="glycerophosphodiester phosphodiesterase
                     domain-containing protein 4 isoform X1"
                     /protein_id="XP_006229858.1"
                     /db_xref="GeneID:680990"
                     /db_xref="RGD:1585799"
                     /translation="MEETQAESTGKSRNTIENVSLWIEQFFNYKCYITLLTGCYSCQW
                     QYGEWEKPELGSCCCSRKEQFFFLCLVTAFILSVLFLFVWVETSNEYNSFDWVVFLGT
                     GCWFFWSILVLCAGGILTVYTSLLLLFGFLLLWERIELTLHTSHKVFIFLVIILCSFL
                     LGVLNQFWKDKWLIAGLSLQIFAPFVHLSLITVMVIISWPLAICMAHLETEVKRRYMM
                     DNYEHEILEKCNVFQRLRALQVTAGLSFLIILLCLYLMPLGIYSPCVLKKENLGPKPA
                     LFGHRGAPMLAPENTMMSFEKAVEFGVSGLETDIYVSVDHVPFLMHDYDLTRTTNIIE
                     VLPSAASNHSSNFNWTFLSSLNAGQWFLKHKPFFGMKPLSEADQKRAGNQSIPQLSEF
                     LELAKREEKIVLFDLFGPPPGHPLRNTFVRRVVRVILDSKIEQRLIFWLPGFDREYVK
                     YMAPGFQHVGRLWSIEELTQKNISIINVDYKRLFYSGLRDYKKAKIYIHVYVINEPWL
                     FSLAWCSNVNSVTTDNIELLSQLSHPLFFMTPGYYLLMWLFLDVASAIIIGVIFCYHW
                     VKELRRERWLETTASADFERLNLPTENSEIQRTPHLPSKPPAQIGRSPWTPEVHYESS
                     TRRGKNRTHTSQFVKAPKKKPVPFKNKVKPLTQGFQHTQESTTSQASLQTPQPTLKED
                     ESPGPVIEDSSKKNHLTDITENIDISHRKPEVAPDSVNLTAKNKKEFQGKKPTTQKS"
ORIGIN      
        1 tccctcgtgc ctgtcctcca tcttgagaaa cgcttgtctt cacaggtgtg aaattcagat
       61 ttgcgttggc gactgtaaaa aatcacccaa aagggtgaat catggaagag acccaagctg
      121 agtctactgg caagtcaaga aacacaattg agaatgtcag tctatggata gagcagttct
      181 tcaactacaa atgctacatc accctcctga ctggctgcta cagttgccag tggcaatatg
      241 gagagtggga aaagccagaa cttggatcct gttgctgctc ccggaaagag caatttttct
      301 ttttgtgcct ggtaactgca ttcatcttgt ctgtgctttt tctgttcgtc tgggtagaaa
      361 cctccaatga atacaacagc tttgactggg ttgtttttct agggacagga tgctggttct
      421 tttggtccat tttggtgctg tgtgcaggtg ggatcctgac tgtctacact tccttgcttt
      481 tgttgtttgg gtttctgttg ctctgggaaa ggattgaact aaccctgcat acgtcgcaca
      541 aggtcttcat ttttctagtc atcatcctgt gctccttctt acttggtgtt ttaaaccaat
      601 tctggaagga caagtggctg atagctgggc tgtcactgca gatctttgct cccttcgtgc
      661 acctgagcct cataactgtg atggttataa tttcctggcc tctagccatc tgcatggccc
      721 acttggaaac agaagttaaa agaagataca tgatggacaa ttatgagcac gaaatactgg
      781 agaaatgtaa tgtattccaa aggttaagag ctttacaagt aactgctgga ctgtccttcc
      841 tgatcattct tttatgtctt tatttgatgc cgctggggat ttattccccc tgtgttctga
      901 agaaggagaa tttagggcct aagcctgccc tctttggaca tagaggcgca cctatgttgg
      961 cgccagagaa taccatgatg tcctttgaga aggctgttga atttggtgtt tctggtctgg
     1021 agacagatat atacgtaagc gttgatcatg tgcctttcct catgcatgac tatgacctga
     1081 ctaggacaac caatatcata gaggtcctac catcagctgc tagtaaccac tcttccaact
     1141 tcaattggac gttcctatca tctctgaatg ccggccaatg gttcttaaag cataagccat
     1201 tttttggcat gaaaccttta tcagaggctg atcaaaaaag agcaggcaac caatcaattc
     1261 cacagctgag tgagtttttg gaacttgcaa aaagggaaga gaagattgtg ctatttgacc
     1321 tttttggccc tccaccagga catcctctga gaaacacttt tgtccgaaga gtagtaaggg
     1381 tcatcctcga ctctaaaatt gagcagcgtc tgatattttg gctgccgggt tttgatagag
     1441 aatatgtcaa gtacatggct cccggttttc agcatgtggg ccgtttatgg tccattgagg
     1501 agctcacaca aaagaatatt agtataataa atgtcgacta taagagactg ttctactctg
     1561 ggttgagaga ttataaaaag gctaaaatct acatccatgt gtatgtcatc aatgagcctt
     1621 ggctcttctc gctggcctgg tgttctaatg tcaactctgt gaccacagac aacattgagc
     1681 tcctgagtca gcttagccac cctctcttct tcatgacacc aggctactac ttgctcatgt
     1741 ggcttttcct ggatgttgct tctgcgatta tcatcggcgt tatattttgt tatcactggg
     1801 taaaagagct gagaagagaa aggtggcttg aaactactgc atctgcagat tttgagagac
     1861 taaacctccc cacagaaaac tctgagattc aaagaactcc acacttacct agcaagcctc
     1921 ctgcccaaat agggagaagt ccatggactc cagaagtcca ctatgaaagc tcaaccagga
     1981 gaggaaagaa ccgcacacac acttctcaat ttgtcaaagc ccccaagaag aaaccagtac
     2041 cattcaagaa caaggttaaa ccactaactc agggctttca acatacccaa gaatccacca
     2101 ccagccaagc ttccttacaa accccacagc ccaccttgaa ggaggatgaa tcaccaggac
     2161 ccgtcataga ggactcttct aaaaaaaatc acctaacgga cataacagaa aatatagata
     2221 tctctcaccg gaagccagag gtggcacctg attctgtcaa tttaactgct aaaaataaga
     2281 aagaatttca gggaaaaaag cctacgacac aaaaatcata ggaaaactct ggccagattc
     2341 cagcctttcg agatattcaa actctctccg tttcacagca gtcctgaaag aggaggctct
     2401 ctctcaaacc accagatttc ttccagtgag agcattgttt cattaggact tgccaagaag
     2461 aatagccaac ctgtatctcc ccaagggaga tattagtgcc accaccagta acccctaaga
     2521 gaatactata cctcgaggct cccccaaaga tgacaatgct ctgtcagagc ttccaaaagg
     2581 aacctcgaac caccaaagtg tcctaagggg ggtgtgagat cgctaatgct cccctcaaca
     2641 gtactgtgtc tcctaagggg ttttatcgaa ccaccagtgt gcctatagag aacatcaaac
     2701 ctccaagttc ccatttaagg gatcactagg tacacacctc actgaacacc accatgaccc
     2761 ctgtataact aaatcccttc ccagaaatct gtttacacag catgttcctc ctcaattatg
     2821 ccttccttct cccactagag aaaatttaac ctcatttgcc ctcttctcct cctctctgaa
     2881 cctaagtatg gtgatggtgg ggtgtggtca aggctcccgt agaggccttc aaggctttca
     2941 ggagcagcac tgtggcccag ctcctctatg ggatgcactt gagaagacag gccaggggaa
     3001 atggtggtgc acagtcgtgg acctggaact ggctgctctc tgggtttgca gggctgtctc
     3061 attgtatgct tctgttgttc ttcctgctgg aggagtgtct agtcacgtca gcttataata
     3121 aaggcagcct ctcaggaagc cagtgtgcgg tttgcccctc tgtggtcacc taggctgatg
     3181 aagactgtgg gatggcacag tagtgacatt ttcctaagtc agggatagag aggtggccta
     3241 ggcttgagcc aggacaaagc tctcatccca ccctcgtttt ctgatctgtg tgcaggtggt
     3301 tgcttgctcc cca
//
