LOCUS       XM_017597501            1615 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus growth differentiation factor 9
            (Gdf9), transcript variant X1, mRNA.
ACCESSION   XM_017597501
VERSION     XM_017597501.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017597501.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017597501.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1615
                     /gene="Gdf9"
                     /note="growth differentiation factor 9; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 3 ESTs, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     5 samples with support for all annotated introns"
                     /db_xref="GeneID:59304"
                     /db_xref="RGD:71038"
     CDS             194..1252
                     /gene="Gdf9"
                     /codon_start=1
                     /product="growth/differentiation factor 9 isoform X1"
                     /protein_id="XP_017452990.1"
                     /db_xref="GeneID:59304"
                     /db_xref="RGD:71038"
                     /translation="MKKLYKTYATKEGVPKPSRSHLYNTVRLFSPCAQQEQAPSNQMT
                     GPLPMVDLLFNLDRVTAMEHLLKSVLLYTLNNSAASSSTVTCVCDLVVKEPMSSSKAT
                     PRAPYSFTLRKHRWIEMDVTSLLQPLVASSERSIHLSVNFTCTRDQAPENGTFNMPLS
                     VPPSLILYLNDTSTQAYHSWQSLQSTQRHSQHPGQGSVTTRPVEEEATEVERSPRHRR
                     GQKTLSSETKKPLTASFNLSEYFRQFLFPQNECELHDFRLSFSQLKWDNWIVAPHRYN
                     PRYCKGDCPRAVRHRYGSPVHTMVQNIIYEKLDPSVPRPSCVPGKYSPLSVLTIEPDG
                     SIAYKEYEDMIATRCTCR"
ORIGIN      
        1 cgtgaagtca tttccgggag ctaccatttt tcttctatct tgaggaggag atgcaaaaag
       61 aaatgcgagt tgacctcggt gggcgcggcc tgaccttccg cgggtgcgga actgacccaa
      121 ggagagacat gttctctctg ataggcgagg tgagacccct aagctgcagc ctgactccag
      181 agctctctac tacatgaaaa agctctataa gacgtatgct accaaagagg gggttcctaa
      241 acccagcaga agtcacctct acaataccgt ccggctcttc agcccctgtg cccagcagga
      301 gcaggctccc agcaaccaga tgacaggacc cctgccaatg gtggacctgc tatttaacct
      361 ggaccgggtg actgccatgg aacacttact caaatcggtc ttgctataca ctctgaacaa
      421 ctccgctgct tcctcctcca ctgtgacctg tgtgtgtgac cttgtggtaa aggagcccat
      481 gtcttccagc aaggctaccc caagagcgcc atactcattt accctgagga aacacaggtg
      541 gattgagatg gatgtgacct ccctccttca gcccctggtg gcctcaagcg agaggagcat
      601 tcacctatct gtcaatttta catgcacaag agaccaggcc ccagagaatg gaacgtttaa
      661 tatgcctctc tcagtgccgc cctcgctcat cttgtatctc aatgacacga gtacccaggc
      721 ctaccattcc tggcagtccc ttcagtccac ccagaggcat tcacagcatc ccggccaggg
      781 cagtgtgact acccgtcctg tggaagagga ggctactgag gtagaaagat ctcctcggca
      841 ccgtcgggga cagaaaaccc tcagctcaga aacaaagaag ccacttacag catccttcaa
      901 tctcagtgaa tacttcagac agtttctttt ccctcaaaac gagtgtgaac tccatgattt
      961 cagactgagt tttagtcagc tcaaatggga caactggatc gtggccccgc acagatacaa
     1021 ccctaggtac tgtaaagggg actgtccccg ggcagtcagg catcggtacg gctctcctgt
     1081 gcacaccatg gtccagaata tcatctatga gaagctagac ccctcagtgc caaggccttc
     1141 atgtgtgccc ggcaaataca gccccttgag cgtgttgacc attgaacccg atggctccat
     1201 tgcttacaaa gagtacgaag atatgatagc tacaaggtgc acctgtcgtt agcatggggc
     1261 tctctacaac acctgagcct gtctggcaga gcagtgccat gggccttaga gggcctgggc
     1321 agagagcttc atgtgaccaa tctttctgtg tcactcagtg cacattgtat gagcagggga
     1381 agtgtgtgtg tgtgtggatg agcatgttgt gtgcagtagc cataggtgta caggacacac
     1441 tggtcgttgc cataaaccaa gtggattata gctcattcgg agatcttttt cttacccacg
     1501 agtgtggttt ccaatggaca aatttattag cataggtctt gagtggaaat gtagctgtga
     1561 acacttcaga gtgctgtggt tttacgcgta acagaagaat aaaccgttga tggca
//
