LOCUS       NM_032615               1555 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus glycerophosphodiester phosphodiesterase 1 (Gde1),
            mRNA.
ACCESSION   NM_032615
VERSION     NM_032615.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Tsuboi,K., Okamoto,Y., Rahman,I.A., Uyama,T., Inoue,T., Tokumura,A.
            and Ueda,N.
  TITLE     Glycerophosphodiesterase GDE4 as a novel lysophospholipase D: a
            possible involvement in bioactive N-acylethanolamine biosynthesis
  JOURNAL   Biochim Biophys Acta 1851 (5), 537-548 (2015)
   PUBMED   25596343
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Zheng,B., Berrie,C.P., Corda,D. and Farquhar,M.G.
  TITLE     GDE1/MIR16 is a glycerophosphoinositol phosphodiesterase regulated
            by stimulation of G protein-coupled receptors
  JOURNAL   Proc Natl Acad Sci U S A 100 (4), 1745-1750 (2003)
   PUBMED   12576545
REFERENCE   3  (bases 1 to 1555)
  AUTHORS   Zheng,B., Chen,D. and Farquhar,M.G.
  TITLE     MIR16, a putative membrane glycerophosphodiester phosphodiesterase,
            interacts with RGS16
  JOURNAL   Proc Natl Acad Sci U S A 97 (8), 3999-4004 (2000)
   PUBMED   10760272
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC070897.1.
            
            On May 24, 2004 this sequence version replaced NM_032615.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC070897.1, AF212861.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q35"
     gene            1..1555
                     /gene="Gde1"
                     /gene_synonym="Mir16"
                     /note="glycerophosphodiester phosphodiesterase 1"
                     /db_xref="GeneID:60418"
                     /db_xref="RGD:621788"
     exon            1..355
                     /gene="Gde1"
                     /gene_synonym="Mir16"
                     /inference="alignment:Splign:2.1.0"
     CDS             95..1090
                     /gene="Gde1"
                     /gene_synonym="Mir16"
                     /EC_number="3.1.4.44"
                     /note="membrane-interacting protein of RGS16;
                     lysophospholipase D GDE1; glycerophosphoinositol
                     glycerophosphodiesterase GDE1"
                     /codon_start=1
                     /product="glycerophosphodiester phosphodiesterase 1"
                     /protein_id="NP_116004.2"
                     /db_xref="GeneID:60418"
                     /db_xref="RGD:621788"
                     /translation="MWLWEDQGGLLGPFSFVLVLLLVVTRSPFNACVLTGSLYLLLRF
                     FSFEPVPSRRALQVLKPRDRVSAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEF
                     TSDGVPVLMHDNTVDRTTDGSGRLCDLTFEQVRKLNPAANHRLRNEFPDERIPTLREA
                     VTECLCHNLTIFFDVKGHADMASAALKNIYMEFPQLYNNSMVCSFLPEVIYKMRQTDQ
                     KVITALTHRPWSLSHTGDGKPRYSVFWKQSVFVVLDILLDWSMHNVLWYLCGISAFLM
                     QKDFVSPDYLKKWSAKGIQVVSWTVNTFDEKNYYESHLGSSYITDSMLEDCAPHF"
     exon            356..531
                     /gene="Gde1"
                     /gene_synonym="Mir16"
                     /inference="alignment:Splign:2.1.0"
     exon            532..637
                     /gene="Gde1"
                     /gene_synonym="Mir16"
                     /inference="alignment:Splign:2.1.0"
     exon            638..730
                     /gene="Gde1"
                     /gene_synonym="Mir16"
                     /inference="alignment:Splign:2.1.0"
     exon            731..942
                     /gene="Gde1"
                     /gene_synonym="Mir16"
                     /inference="alignment:Splign:2.1.0"
     exon            943..1532
                     /gene="Gde1"
                     /gene_synonym="Mir16"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccagcggag ggttccggct gtggccagta cctcagcatc tacgcgtcgc ccggcaggtc
       61 cggggctccg gtccgtgccg gtgcaggcgc cggcatgtgg ctgtgggagg accagggcgg
      121 cctcctgggc cccttctctt tcgtgctggt gctgctgctg gtggtgacgc gcagcccctt
      181 caacgcctgt gtgctcactg gcagcctcta cctcctgctg cggttcttca gcttcgagcc
      241 ggtgccgtcc cgccgggccc tgcaggtgct caagccccgt gaccgcgtgt ccgccatcgc
      301 ccatcgcggc ggcagccacg acgcgcccga gaacacgctg gcggccatcc ggcaggcagc
      361 taagaatgga gcaacaggtg tggagctgga catcgagttt acttctgatg gagttcctgt
      421 cttgatgcac gataacacag tagataggac aacagacggg tctggccgat tatgtgatct
      481 gacatttgaa caagttagga aacttaatcc tgcagcaaat cacagactca gaaatgagtt
      541 ccctgacgaa aggatcccca ccctgaggga agcagttaca gagtgcctct gccataacct
      601 caccatcttc ttcgatgtca aaggccatgc agatatggct tctgctgctc taaagaatat
      661 atacatggaa tttccccagc tgtacaacaa cagtatggtc tgctcattct tgccggaagt
      721 catctataaa atgagacaaa cagatcagaa ggtaatcaca gccctgactc acaggccttg
      781 gagcctgagc cacactggag acgggaagcc tcgctacagc gtcttttgga agcagtctgt
      841 gtttgtggtg ttggacatct tgcttgactg gagcatgcac aatgtcttgt ggtacctgtg
      901 tgggatttca gccttcctca tgcagaagga ttttgtctcc ccggactatt tgaagaagtg
      961 gtcagccaaa ggaatccagg ttgttagttg gactgtcaat acctttgatg aaaagaatta
     1021 ctacgagtcc caccttgggt ccagctacat cactgacagc atgctggaag actgtgcacc
     1081 tcacttctag actccccagg aggaaacaca gatgcaaaac tgcctggagg ccttttgcag
     1141 ggacacgaga acactctgtt agcacaagcc ctgggaatcc tgcggctcat actagcaata
     1201 gccacagttt taccccaagc agaaaccagg catggcgacc atgctccaag gaaggctcca
     1261 cacttgccct taaaattctg gatctgtgaa aaggcagggt ggccctaccc aaccccgctg
     1321 agggtacaga gccacaagga tgagcagagt gggtcctgca attagggcgc aggcaccaat
     1381 gcatgggctt gcatgatcac tccaagttga cattttaaat cttgctatac ttcagtaatt
     1441 cacttatttc caatatttgt cgtcagctct gttaatggcg acatgtaggt gtcaaacttg
     1501 tgaccatact aataaaatca ttgaaaggtg aaaaaaaaaa aaaaaaaaaa aaaaa
//
