LOCUS       NM_001013201            2553 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus ganglioside-induced
            differentiation-associated-protein 2 (Gdap2), mRNA.
ACCESSION   NM_001013201 XM_342303
VERSION     NM_001013201.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2553)
  AUTHORS   Schroder,B., Wrocklage,C., Pan,C., Jager,R., Kosters,B.,
            Schafer,H., Elsasser,H.P., Mann,M. and Hasilik,A.
  TITLE     Integral and associated lysosomal membrane proteins
  JOURNAL   Traffic 8 (12), 1676-1686 (2007)
   PUBMED   17897319
REFERENCE   2  (bases 1 to 2553)
  AUTHORS   Liu,H., Nakagawa,T., Kanematsu,T., Uchida,T. and Tsuji,S.
  TITLE     Isolation of 10 differentially expressed cDNAs in differentiated
            Neuro2a cells induced through controlled expression of the GD3
            synthase gene
  JOURNAL   J Neurochem 72 (5), 1781-1790 (1999)
   PUBMED   10217254
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC082000.1.
            
            On Apr 20, 2005 this sequence version replaced XM_342303.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082000.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2553
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..2553
                     /gene="Gdap2"
                     /note="ganglioside-induced
                     differentiation-associated-protein 2"
                     /db_xref="GeneID:362004"
                     /db_xref="RGD:1306050"
     exon            1..149
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            150..389
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     CDS             214..1707
                     /gene="Gdap2"
                     /codon_start=1
                     /product="ganglioside-induced
                     differentiation-associated-protein 2"
                     /protein_id="NP_001013219.1"
                     /db_xref="GeneID:362004"
                     /db_xref="RGD:1306050"
                     /translation="MDPLGAPSQFVDVDTLVSWGDSYEDEVNSSDSTAEAFQEDSNRS
                     PFLYNRDINGKVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDLKEDLQ
                     KLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQS
                     MSSVGFCVINSAKRGYPLEDATHIALRTVRRFLEIHGETIEKVVFAISELEEATYQKL
                     LPLYFPRSLKEESQSLPSLPADIGNAEGEPVVPERQIRISEKPGASEDHEEDEDEGLG
                     VDLSFIGSHAFARMEGDIDKQRKLILQGQLSEAALQKQHQRNYNRWLCQARSEDLSDI
                     ASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFH
                     TLTSEYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKD
                     KIHHVDSLQQLFSAISPEQIDFPPFVLEYDARENGPYFASYPPSPDL"
     exon            390..529
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            530..683
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            684..772
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            773..849
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            850..1009
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..1166
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            1167..1243
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            1244..1320
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            1321..1460
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            1461..1515
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            1516..1659
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
     exon            1660..2529
                     /gene="Gdap2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagaacgctg tcgccagtca ccctgtcctc tggagaccgg ctcgcttcag cctccgcctt
       61 tggcaatcaa agtgtcagat gtcaccctcc cgacttctgc tacggatctg agctgcgggc
      121 cgccgcccga atgggcccgc ctgagcgctc taaaatctcc agggattgtt gaattgccga
      181 agagcttggg ccacaagctg aagttctcat tccatggatc ccttgggtgc accttcccag
      241 tttgtggatg tggacaccct agtaagctgg ggtgactcat atgaagatga agtaaactcc
      301 tctgacagca cagctgaggc attccaggaa gacagcaata gatcaccttt tctttataat
      361 cgggacatta atggaaaagt ggttctttgg aaaggagatg tggcattact gaactgtaca
      421 gccattgtga ataccagtaa tgaaagcctc acagataaga atcctgtgtc agagagcatc
      481 ttcatgcttg cagggccaga tttgaaggag gacttacaga aacttaaagg ttgccgaact
      541 ggtgaagcaa aattgacaaa aggcttcaac ctagctgctc ggttcatcat ccacacagtg
      601 gggcctaagt ataagagccg ctaccgcacc gcagcggaga gttccctcta cagctgctac
      661 cgaaacgtgc ttcagctggc aaaggagcag tccatgtctt ccgttggctt ctgtgtcatc
      721 aattctgcaa agcgaggtta tccactagaa gatgcaacac acatcgctct tcgtactgtg
      781 aggcggttcc tagagatcca tggggaaacc attgaaaagg tggtatttgc tatctcagaa
      841 ctcgaagagg ccacttacca aaagctgcta cctctgtact tcccaaggtc attaaaggag
      901 gagagccagt cattgccgtc cctacctgca gacattggaa atgcagaagg ggagcccgtg
      961 gtgcctgagc ggcagatcag gataagtgag aaacctggtg cttcagagga ccatgaagaa
     1021 gatgaggatg aaggcttggg agtggatctg tctttcattg gctctcatgc ttttgctcga
     1081 atggaaggag atattgacaa gcaaagaaaa ctgatcctcc aaggacagct gtcggaagct
     1141 gccctgcaga agcagcatca aagaaattat aatcgctggt tatgccaagc acgatctgaa
     1201 gacctgtctg atattgcttc tctgaaagct ttataccaaa caggtgtaga taactgtggc
     1261 cgcacagtga tggtggtagt tggaagaaac attcctgtga cattgataga catggataag
     1321 gccctcttgt attttatcca tgtaatggat cacatcgccg tgaaggaata tgtattggtg
     1381 tatttccaca cactgaccag cgaatacaat cacctggact ccgacttcct gaagaaactc
     1441 tacgatgtcg ttgacatcaa gtacaagagg aatttgaagg ctgtttattt cgtccatcca
     1501 acattccgtt ccaaggtctc aacatggttt ttcaccacct tttctgtctc aggattgaag
     1561 gacaagatcc accacgtgga cagcctgcag cagctcttct ctgccatttc accagaacag
     1621 atagactttc cgccttttgt ccttgaatat gatgccaggg aaaatgggcc ttattttgca
     1681 tcttaccctc catcaccaga tttgtgacct gccgctcgct tcccagggct tctcggttac
     1741 aggattccat ctcaccacaa ctcgacacct atggagtgat gttcattttt gctgtacaga
     1801 tccagagagc ttttgtcccc acctctctgg tattttttta ttgactatgt attttctggc
     1861 acataagcaa tctaaaactg gtaggccatt ctgaactgca tacattttaa atttgtatat
     1921 ttgtatcaaa tggaaatgct catttttaga gcattaatag aaactgggga tcaacttttg
     1981 agtgtcttca gtttcctgaa ggacgctgga ctctgtcaca caggccacca acgttgctca
     2041 cattgtctct tacagtgcac gcttccggac tctgttaccc aggctaccaa cattgttcat
     2101 agcatctgta aagcagtgca cgctctctat gtatttaagt gtttctcaaa ctatatagaa
     2161 cgaatatgtg ctgagcggat gtattgttcc ctcagatcat ggctttaata ccatttacat
     2221 tttataccaa tgatctgatt ataatatagg attccccatg accaagaata ttggaatgtg
     2281 tctggttgaa actgtaaaaa ccttcaacaa aacttagaac tcacgaattg ttggcacaag
     2341 gtaaggctga gctgtaagag cttcttggat tattgacttt gctcagattg acactgttct
     2401 gatctcagag tgtggagaac atgaagactg tatcttcaac tcttttctat aatcatgtga
     2461 ctggtctcct tatgaaaaga atgttgtgct accagcactc ctaagtaaag agcatttccc
     2521 aggactccaa aaaaaaaaaa aaaaaaaaaa aaa
//
