LOCUS       NM_001107798            1219 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus ganglioside-induced differentiation-associated
            protein 1-like 1 (Gdap1l1), mRNA.
ACCESSION   NM_001107798 XM_001069499 XM_230858
VERSION     NM_001107798.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1219)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1219)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168159.1.
            
            On Aug 10, 2008 this sequence version replaced NM_001107798.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168159.1, FQ212886.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..1219
                     /gene="Gdap1l1"
                     /gene_synonym="Gdap1l"
                     /note="ganglioside-induced differentiation-associated
                     protein 1-like 1"
                     /db_xref="GeneID:311616"
                     /db_xref="RGD:1304960"
     exon            1..189
                     /gene="Gdap1l1"
                     /gene_synonym="Gdap1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             10..1110
                     /gene="Gdap1l1"
                     /gene_synonym="Gdap1l"
                     /codon_start=1
                     /product="ganglioside-induced differentiation-associated
                     protein 1-like 1"
                     /protein_id="NP_001101268.1"
                     /db_xref="GeneID:311616"
                     /db_xref="RGD:1304960"
                     /translation="MATPNNLTPTNCSWWPISALESDAAKPVEAPDAPEAASPAHWPK
                     ESLVLYHWTQSFSSQKVRLVIAEKGLSCEERDVSLPQSEHKEPWFMRLNLGEEVPVII
                     HRDNIISDYDQIIDYVERTFTGEHVVALMPEAGSPQHARVLQYRELLDALPMDAYTHG
                     CILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEPQLSEPYLSKQKKLMAKIL
                     EHDDVGYLKKILGELAMVLDQIEAELEKRKLENEGQTCELWLCGCAFTLADVLLGATL
                     HRLKFLGLSKKYWEDGSRPNLQSFFERVQRRLAFRKVLGDIHTTLLSAVIPNAFRLVK
                     RKPPSFFGASFLMGSLGGMGYFAYWYLKKKYI"
     exon            190..382
                     /gene="Gdap1l1"
                     /gene_synonym="Gdap1l"
                     /inference="alignment:Splign:2.1.0"
     exon            383..556
                     /gene="Gdap1l1"
                     /gene_synonym="Gdap1l"
                     /inference="alignment:Splign:2.1.0"
     exon            557..651
                     /gene="Gdap1l1"
                     /gene_synonym="Gdap1l"
                     /inference="alignment:Splign:2.1.0"
     exon            652..766
                     /gene="Gdap1l1"
                     /gene_synonym="Gdap1l"
                     /inference="alignment:Splign:2.1.0"
     exon            767..1135
                     /gene="Gdap1l1"
                     /gene_synonym="Gdap1l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgggctgtca tggcgacccc caacaacctg acccccacca actgcagctg gtggcccatc
       61 tcggcgctgg agagcgatgc agccaagccg gtggaagccc ccgacgcgcc cgaggcagcc
      121 agccccgccc attggcccaa ggagagcctg gttctgtacc actggaccca atccttcagc
      181 tcgcagaagg tgcggctggt gattgctgag aagggcctgt cctgtgaaga gagagacgtg
      241 agcttgcctc agagtgagca taaggaaccc tggttcatga ggctcaacct gggtgaggag
      301 gtcccggtca ttatccacag agacaacatt atcagtgact acgaccagat cattgactat
      361 gtggaacgca ccttcacagg agagcatgtg gtggccttga tgcccgaggc aggcagccca
      421 caacacgccc gagtgctgca gtaccgggag ctgctggatg cgttgcccat ggacgcctac
      481 acgcacggct gcatcctgca ccccgagctc accacagatt ccatgatccc caagtatgcc
      541 acggctgaga tccgcagaca tttagccaac gccaccacag acctcatgaa actggaccat
      601 gaagaaccac agctctctga gccttacctt tctaaacaga agaagcttat ggccaagatc
      661 ctagagcacg acgatgtggg ctacctgaag aagatcctcg gggagctggc tatggtgctg
      721 gaccagatcg aagcagagct ggagaagagg aaactggaga atgaggggca gacgtgtgag
      781 ctgtggctgt gtggctgtgc cttcaccctg gcggatgtcc tcctgggagc caccctgcat
      841 cgcctcaagt tcctcggact gtccaagaaa tactgggaag acggcagccg gcccaacctg
      901 cagtccttct ttgagagggt ccagagacgc ttggccttcc ggaaagtcct gggcgacatc
      961 cacacaaccc tgctatctgc tgttatcccc aatgcgttcc gactggtgaa gcggaaaccg
     1021 ccatcattct ttggggcgtc cttcctcatg ggctccttgg gtgggatggg ctactttgcc
     1081 tactggtacc tcaagaaaaa atacatctag agccaggctg gggcctggtg tgtgaaaaaa
     1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1201 aaaaaaaaaa aaaaaaaaa
//
