LOCUS       NM_001419536            2160 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus glucosaminyl (N-acetyl) transferase family member
            7 (Gcnt7), mRNA.
ACCESSION   NM_001419536 XM_006235707
VERSION     NM_001419536.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Apr 7, 2023 this sequence version replaced XM_006235707.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582424.18149.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760434, SAMN06680445
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1106              JAXUCZ010000003.1  181640355-181641460 c
            1107-1202           JAXUCZ010000003.1  181639328-181639423 c
            1203-2160           JAXUCZ010000003.1  181637406-181638363 c
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..2160
                     /gene="Gcnt7"
                     /gene_synonym="gcnt"
                     /note="glucosaminyl (N-acetyl) transferase family member
                     7"
                     /db_xref="GeneID:102550196"
                     /db_xref="RGD:7496421"
     exon            1..1106
                     /gene="Gcnt7"
                     /gene_synonym="gcnt"
                     /inference="alignment:Splign:2.1.0"
     CDS             137..1426
                     /gene="Gcnt7"
                     /gene_synonym="gcnt"
                     /note="beta 1,6-N-acetylglucosaminyltransferase;
                     beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 7-like"
                     /codon_start=1
                     /product="glucosaminyl (N-acetyl) transferase family
                     member 7"
                     /protein_id="NP_001406465.1"
                     /db_xref="GeneID:102550196"
                     /db_xref="RGD:7496421"
                     /translation="MSRLWTTKAGLVACGMICAFIFLYLRSPGPEEADAEPTRPAVVE
                     CGFYPDELCSALFEGKKAAPQIAQFCRPPRNSEVLAHLSTPGNCSRMAQGLHFITRPL
                     SAEEGNFSLAYVIHAPKELAMLVRLLRAIYAPQNVYCIHTDDKAPTKFKSAMQTFVGC
                     FRNVFLSSKTQKVAHDNLRRLQAEIDCMRDLVRSPLQWRYVMNLGGQEFPIKTNKEII
                     HYIRTRWKGKNITPGVTPPSNTKPKTGQSPPKPSSNENSYTSPNTRFKPKPPRNLTIH
                     SGSAYYALTRNFVEFVLTDPRAKDMLQWSKDILSPEQHYWVTLNRLKDAPGATAGAGW
                     EGHIRATKQRTEAGDGHTGCTGHDAQDTCVYGLGDLPWLVQLPAFFATMEPSTDPLVV
                     VCIERRHRLKALQQAKVPPEPHWQFPQESHFSSQAHD"
     exon            1107..1202
                     /gene="Gcnt7"
                     /gene_synonym="gcnt"
                     /inference="alignment:Splign:2.1.0"
     exon            1203..2160
                     /gene="Gcnt7"
                     /gene_synonym="gcnt"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aatgtgcttc tgagagttgg ggtggcaggg gctggaggaa ggtaccctcc tctctgaatg
       61 ttctgttgct cctttaggaa actgagagga aaacctttca gactatggtg gcgacaacac
      121 cctgacagct caaagcatga gccggctctg gaccacgaag gctgggctgg tggcgtgtgg
      181 catgatctgc gccttcatct tcctttacct gagaagtcca gggcctgagg aggctgacgc
      241 tgaacccacc cgcccagctg tggtggaatg tggcttctat ccagatgagc tgtgctcggc
      301 tttatttgag gggaaaaagg ccgccccgca gattgcacaa ttctgcagac cccctcggaa
      361 ctctgaagta ctcgctcatt tgagcactcc tggaaactgc tccaggatgg cccaggggct
      421 gcatttcata accagacccc tgtctgcaga agaggggaac ttctctttgg cctatgttat
      481 ccatgctcct aaggaactag ccatgcttgt gcggcttctc agagcaattt atgcacctca
      541 aaacgtctac tgtatccaca ctgatgacaa ggcccccacg aagtttaaga gtgccatgca
      601 gaccttcgtg ggctgtttca gaaacgtctt tctttcatca aagacacaga aggtggcgca
      661 tgacaacctc aggaggctgc aggcagagat tgactgcatg agggacctgg tccgttcccc
      721 acttcaatgg cgctatgtca tgaatctcgg tgggcaggaa ttccctatca aaaccaacaa
      781 agaaatcatc cactacatca gaaccaggtg gaagggtaaa aacatcactc ctggggtgac
      841 cccaccctca aacacgaaac ccaagaccgg ccaaagccct ccaaagccca gctccaatga
      901 aaatagctac acatctccaa atacaaggtt caaaccaaaa ccaccccgta atctaacaat
      961 tcactctgga agtgcttact atgcacttac gagaaatttt gtagagttcg tcctaactga
     1021 tccccgtgcg aaagacatgc tgcagtggtc caaagacatc ctcagcccag agcagcatta
     1081 ctgggtgact ctgaaccgac tgaaagatgc tccaggtgcc acagcaggtg ctggatggga
     1141 aggacacatt cgagccacga agcagagaac agaggcagga gacggtcaca cagggtgcac
     1201 aggccatgat gcccaagaca cctgtgtgta cggcctggga gacctgcctt ggctcgtcca
     1261 gttgccagct ttttttgcca cgatggagcc ctccacagac ccactggtgg tggtatgcat
     1321 agagaggcgg cacagactca aagccctaca gcaggccaag gtccccccag agccacactg
     1381 gcaatttccc caggaaagcc actttagcag tcaagcccat gactaagggg gctgtcagca
     1441 tcactctttc aattcctgga cgtgaattac ttcaaacaat gcagaaacac acccctgtca
     1501 ggcctcacca ctgcactggc agggagagac cgatgaggac cgcctgaggc tgtggctgtg
     1561 agccccggtc aacagcacca acagcgtctt accagctgct gagtttcccc acccacccaa
     1621 tccagttcac gctggacacc agcagcaggc cttgttctga gggcctggag accctgggta
     1681 agaggtgccc cacccacagg aagccatgcc tctttagagc tgtccctatg gactaagaac
     1741 agtgcaactt tgttctagaa aattccagaa aaccatctag aggtaaagtg agtaatccca
     1801 cagaggggaa gaaacgtctt ggcctgtcat ctgctgttcc tcctgccatg ctgggggcca
     1861 caactgcact gcctgtgcca ccaccacagg ggtttctgca cacaacaatg tgaagagaga
     1921 cagaggaggc cgcttgactt ttacgaagtt tttcgagtta ggtgattcat gtggcaagtg
     1981 gccaacaccc tggacgtatg ggctgaaggc ataaaaggcc atgggcatcg agcctcaggt
     2041 ccaggtcctt ccctcctatg tccctgactc tcccgtcgct gctgctgtta tgggaaactt
     2101 ctatagatgc tctctctcta gcaatgtcct tggtggcata aagactgaca tgttcaagta
//
