LOCUS       XM_006236234            6358 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus GRIP and coiled-coil domain containing
            1 (Gcc1), transcript variant X2, mRNA.
ACCESSION   XM_006236234
VERSION     XM_006236234.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006236234.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006236234.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6358
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6358
                     /gene="Gcc1"
                     /note="GRIP and coiled-coil domain containing 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 50 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100361513"
                     /db_xref="RGD:2319954"
     CDS             1830..4166
                     /gene="Gcc1"
                     /codon_start=1
                     /product="GRIP and coiled-coil domain-containing protein
                     1"
                     /protein_id="XP_006236296.1"
                     /db_xref="GeneID:100361513"
                     /db_xref="RGD:2319954"
                     /translation="MEKFGMNFGGGPSKKDLLETIETQKKQLLQYQARLKDVVRAYKS
                     LLKEKEALEASIKVLSVSHEADAGLSGVQPPGLTFPDSVDDRCSTHSEDSTGTATSLD
                     TAASLTSVKGEFGVEDDRVARGPLPPKSEEASGSESGVSSSSGDGPSAGSEIDKRVHQ
                     LKTQLATLTSSLATVTQEKSRMEASYLADKKKMKQDLEDANKKAEEERGRLEGDLKGL
                     QEQIAETKARLITQQHDRAQEQSDHALMLRELQKLLQEERTQRQDLELRLEETREALA
                     GRAYAADQLEGFELQTKQLTREVEELKGELQAIREEKNRPDPRLQELQQEAARLKSHF
                     QAQLQQEMRKTALAEDQLRQQSQVEEQRVAALENQISEVSELLGTYEKAKQKDQLAIQ
                     KLKDRILQLDLENKTLALAASSRPSLDIHGDESSLDINVLKDKMEKLKRLLQVAARKS
                     QVTLDVEKLCDPDIMANSEAADGEKATALYYQQELKQLKEEFERYKMRAQVVLKSKNT
                     KDGNLGKELEAAQEQLAELKDKYISLRLSCEELENQHQQEAEDWKQELTRLQQLHQQE
                     LERSQLDFRDRTMKLEEELHKQRDRALAVLAEKDLELEQLRSVALSSGLPGRRSPVGG
                     VGGGGLGDPDDPASSDSLTQALQLAAANEPTFFLYAEQLARKEVEITSLRKQKHRLEV
                     EAHQLQERLLEEGERHREEVGALQSHIEKNIRDQSREGANLEYLKNIIYRFLTLPDSL
                     GRQQTLTAILTILHFSPEEKQVLMRLPSGGSWWPSGKR"
ORIGIN      
        1 ccgccccagc cccgccccta ggcgcgtttg cggaagaact gaagtcgagc gaggcctggc
       61 agcctgcctg gggcggaggg cttgttcggg gtcgctagtc tccgcatgac tttgctttac
      121 tcttaagtca tagacttgca ctcgtaagac ggctttgata gggtccacac gaacatgtaa
      181 aagatcctca aagtagcata ttgtctattg ttttgaaaca ctatgtagcc ttgggtggtc
      241 tggaacttgc tatgtagacc aacctggtca cgaactcaca gagatgcggc cggcttggcc
      301 tcctgagcag atttttatta cagaaatatt ttcttcaaac gcgttctctc tctctctctc
      361 tctctctctc tctctctctc tctttcagag tgagcctcct cacaggcttg gtatcttcat
      421 aatatcacag gagtcttctt tgtttttagc ccctccccac ttttatgttg tgttcgtgtg
      481 tggaggtgtg tagagctcag agaacaactt gtaggggtgt gttctctcct tccaccgtgt
      541 gggtcctggt gatagaactt aggtcaggtc actgggcctg gtgaaaatcg tctttactgc
      601 tgaaccatct taaaaacccc acaggagtct tgatggaatg gacaaaagca aagagtcttg
      661 atggtgccct ccggagatga aaatctttta atgtcttgtc acccaagatg aaatctaaat
      721 gcctttaagt tgggtcctac cctttgttcc agattcatca atagccaccc acctcccaca
      781 ccataagctt cctgggcaag tcaggctcac tgatagatac ctcagaggtt cctgtaaacg
      841 tttccgcttt tcttgatgct ggtttcccac atttgcagtt tggcagtctt tactcattcc
      901 tcaaacttca agtcatttcc cctaagagtc tctgtccttc tgacaggtgc ctcgcctctt
      961 ttataccctt caactatacc cttacatact atactagtgt gagggcagca tctacttgtt
     1021 tgcatgtcct tgctgttagg agtttctcgg gaccaaggcc atgtttcttc aatggtgcca
     1081 tcaggcatag catttagtat ggtgagaggc agactgagat aggattccta aacttactag
     1141 ctgagtgaca ttgggcatgt tacccctctg tacatttact gtatgttcca gtaaatgtaa
     1201 attggtgcta atgataccct ctgaacagaa ttttgcaaag actaaatagc aaaaactctt
     1261 gtgagacagc ccccacccca gcatatgctg gtatgcaaga tggaccttat agctatataa
     1321 tgtccctctt actaagcaga actaaacaag ggagctatta tgttaactag gtactgggct
     1381 cgttttccta gtatgagtcc taactgttgc cctaaatgtt ggaaattgcc ccaaatagtt
     1441 tgatgcgtct ttcatcgttt tttttttttt gggggggggg caaatgcagt gtgacgtcgc
     1501 cccctgtcgc tcactggtgg tagtttgagg gcaaagttag gcatcttctc caaacaactg
     1561 ctcaggtgat cttgacttcg ctttgggtaa ctatacctac aggttactct ctctccaggc
     1621 caccagcgaa tactgggtgc ggaagcccca cccatctcat gcccgccggg ggcggggtct
     1681 gtggcgtttt gctgtcgtca cttccagtgg acccggaagc gttgttgtcc cagttgttgg
     1741 gaaatcgtga tggaaccggt cttagtctgt tgtggctctg tccagggctg caagaacgct
     1801 gacgtggagc atcccactcc ggaaccctca tggagaagtt tgggatgaat ttcgggggcg
     1861 gcccaagcaa gaaggatctc ttagagacca tagagacaca gaaaaagcag cttctccagt
     1921 accaggcaag gctcaaggat gtggttcgcg cctataaaag cctgctgaag gagaaagaag
     1981 ccctggaggc cagcatcaag gtactgtcgg tatcccacga ggcagatgca ggcctctcag
     2041 gtgtgcagcc tccgggtctc acgtttcctg attctgtgga tgaccggtgc tccactcaca
     2101 gtgaggatag caccggaact gccacgagct tggataccgc agccagtctt acaagtgtca
     2161 agggtgaatt tggggttgaa gatgacagag tggcccgtgg accacttcct ccaaagtctg
     2221 aagaggccag tgggtcagag agtggcgtta gcagtagcag tggggatggg ccatctgcgg
     2281 gtagtgagat agacaaaaga gtgcatcagc tgaagactca attggccact ttgactagct
     2341 ccttggctac agtcactcag gaaaagtccc gaatggaagc gtcttacctg gcggataaga
     2401 agaagatgaa gcaggactta gaagatgcca ataaaaaggc agaggaagag cggggccgcc
     2461 tggagggaga cttgaagggg ctgcaagagc agatagcaga aaccaaagcc cgacttatta
     2521 cacagcagca cgatcgcgcc caggagcaga gtgaccatgc cttgatgctg cgggagctac
     2581 agaagctttt gcaggaggag aggacccaac gccaggacct ggaacttcgg ctagaagaga
     2641 ccagggaagc cttggcaggg cgggcgtatg cagctgatca gctagaaggg tttgaactgc
     2701 agaccaagca gctgacccgt gaggtagagg agctgaaagg tgagctgcaa gccattcgag
     2761 aggagaagaa ccgaccagat ccccggctgc aggagcttca gcaggaggct gcccgtctta
     2821 aaagccattt ccaggcccag ttgcagcaag aaatgaggaa gacagccctt gcagaggacc
     2881 agcttcgcca gcagtctcag gtagaggagc aaagggtagc agccctggag aaccagatct
     2941 ctgaggtgtc tgaactgctg ggcacctatg agaaagccaa gcagaaagac cagctggcca
     3001 tccagaagtt gaaggatcga attttacagt tggacttgga gaacaagaca ctggcccttg
     3061 cagcctccag ccggccctct cttgacatcc atggagacga atccagtctg gatatcaatg
     3121 tcttgaagga caagatggag aagctcaaga ggctcctgca ggttgcagct aggaaaagcc
     3181 aggtgaccct ggatgtagag aagctctgtg accctgatat aatggccaac tcagaggctg
     3241 cggatgggga aaaggctact gcgctttact accaacagga gctgaagcag ctgaaggaag
     3301 agtttgagcg gtacaagatg agagcccaag tggtgctcaa aagcaagaac accaaagatg
     3361 ggaacctggg gaaggagctc gaggccgcac aggagcagct tgcggagttg aaggacaagt
     3421 atatctccct gcgtctgtcc tgtgaggagc ttgaaaacca gcaccagcag gaggctgagg
     3481 actggaagca ggagctgacc cggctgcagc agctccatca gcaggaactg gagcgcagcc
     3541 agctggactt cagggaccgc acgatgaaac tggaggagga gctacataag cagcgggacc
     3601 gggccctggc ggtgctcgca gagaaggact tggagttgga gcagcttcgt tctgtggcct
     3661 tatcctcggg gttgccagga cgcagaagcc ctgtgggagg agtgggtggt ggaggtcttg
     3721 gggacccgga tgacccagct tcctcggata gcttgaccca agccttgcag cttgctgcag
     3781 ccaacgagcc caccttcttc ctttatgctg agcagttggc ccgaaaggag gtggagatca
     3841 catctctgag gaagcagaaa cacaggctgg aggtagaggc ccatcagctg caggagaggc
     3901 tgctggagga gggcgagcgg catcgagagg aggttggagc ccttcagagc cacatcgaaa
     3961 agaacatcag ggaccagagc agggagggag ccaacctgga gtatctcaaa aacatcatct
     4021 accgcttcct gaccttgcca gacagcctgg gccgccagca gaccctcacg gccatcctca
     4081 ccatcttgca cttcagtcct gaggagaaac aagtactaat gaggctccca agtggtggga
     4141 gctggtggcc ttctggcaag agatgataat tttttaccaa ctcccgaaat ctccgtgcct
     4201 cttttatgtg ggaagggcag gctcggattt ctacggcctc ttctcttgca ttcttattta
     4261 tttcttcact gtgttgaact cagagccgtt caaagtagaa tgggattatc tgccaagtgc
     4321 cattaatgca actttatcct tgggcttttg ggaaactgcc aatgtcgaga cagcattttg
     4381 tagcagtctg tgtatggagc aggttaggga gaaaggctgg gtgggggtag gagatgcaag
     4441 ttaaggaagt ggtgagagtc tttataaacg agatgttttc ttatgctcct agctcagagc
     4501 taggagtaaa tgtgactccc aggggagttc atctgacttt ggaacataca cagtagctat
     4561 gtgtgtattc cttctcagtc agaatctggt ccacttttgt cctaattctc tggggacatt
     4621 aaaatcaagc tgcaaagaga ccggggagtt agaaacagta atggtttgtc cagagggctg
     4681 tggaatcctg agtttatccc agaacttgga gctttgcttc caggaaccag gttaccactt
     4741 tgtgccctcc cagggagggt cccaagcagc agcgtgatct tagcgacttc caaattggtc
     4801 ctatatgggc cagggcagga ttaaaaataa acctctcctg cttaaggttg gcccgagagt
     4861 gtgagtgaat gactttatgg tctttcccta aacattgagc ttgtgtaaga aatgaaatct
     4921 tagcttcttt cagggcattt ggacagtaag ctggggcctg cgtgggtaca aggaatttct
     4981 gccaagattt attcccagct gtgtttgctt ttgcaagaac aggaaaaagg agttaatttg
     5041 ctgcggattc caaaacactg ttaggaccct cacaggaaaa gcaaagttca gctgaaatac
     5101 tttctgccct gtgatcctgg caaaggtcaa ttctattctt ttttcctttg gctaattcta
     5161 ttctttaagg aaagtagctc tcagaaaact tgggtcaaag ctctatcatt gcccaactct
     5221 tttcttcgat tagtctgctc ttcctggtta taaagacctt tggacctgaa agaccaatgt
     5281 ttggccattt aatatatatg tatatatata tatatatgta tatatatata tgtatatata
     5341 tgtatatata tatttgctat ttttattatt gagatctgtt ttgtgagggt ttggggtgca
     5401 gaagactttg attaatgatg ttttcgatgg gaggaggtga cctgattatc tgtgtgagca
     5461 gacttccatg gaacagaagt gatgtcttta tggtaataac aatggtcatt aaacccgagt
     5521 gacttgagct gtgtttcctt aatggtggtg tctatacgtc tggacacaag tagagtgtga
     5581 aagtaaatgg tgaatgaaaa ggctagatat atagttcttt atattgatct ttgagctcga
     5641 atccatattc cattatgtta atccatgagc tttactccag ggagggatac ctcagggctt
     5701 taactgcctg acatataaca aatttcttag gttgggattg cgtgtgtgcg tgcgtgcgtg
     5761 cgtgcatggt gtgtgtggtg cgtgtggtgt gcgtgtgtgt gtggtgtgtg tgtgtgtgtg
     5821 tgtgtgtgtg tgtgtgtgta tgtatgtgtg tttaaagggt ttagtgagtg ggcttggtgc
     5881 ttccataatt actgcttcat attctagaaa ctaatctgta agtgcttctt tttcactaaa
     5941 attgggattc atgataccct ggaaagttat ctcaggacat caagctaata agctaataat
     6001 agacttcctt catttcttta tcttgctccc tctaaatgtc ggatatcctg tgcttgctgt
     6061 tatttctagg tggctctagg aaggacagaa agaagcatag ccacagtcgc ttttccagta
     6121 tttgctgagc ttaaattttt tctttgtcat tttcatacac ttataaaacg aattttactc
     6181 attctcacta cattgtcaat tcctcctctc aagttccctc ccctcttcca ctggaattct
     6241 tgtcagcaag ttcccctcaa acattcctgt ttcctttttg tgtgaggccc tgggagttta
     6301 ataaaaagtc gtttctctct ctcaccttta aataaaagtt aagaaccctt tgttttta
//
