LOCUS       NM_001409108            3373 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus guanylate binding protein 7 (Gbp7), mRNA.
ACCESSION   NM_001409108 XM_039103863
VERSION     NM_001409108.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3373)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jul 8, 2022 this sequence version replaced XM_039103863.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ221477.1, FQ222982.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-110               JAXUCZ010000002.1  233948889-233948998
            111-306             JAXUCZ010000002.1  233952889-233953084
            307-434             JAXUCZ010000002.1  233954464-233954591
            435-544             JAXUCZ010000002.1  233955854-233955963
            545-741             JAXUCZ010000002.1  233956521-233956717
            742-987             JAXUCZ010000002.1  233958468-233958713
            988-1268            JAXUCZ010000002.1  233965669-233965949
            1269-1481           JAXUCZ010000002.1  233966830-233967042
            1482-1584           JAXUCZ010000002.1  233968071-233968173
            1585-1778           JAXUCZ010000002.1  233968486-233968679
            1779-3373           JAXUCZ010000002.1  233968938-233970532
FEATURES             Location/Qualifiers
     source          1..3373
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q44"
     gene            1..3373
                     /gene="Gbp7"
                     /note="guanylate binding protein 7"
                     /db_xref="GeneID:685067"
                     /db_xref="RGD:1583235"
     exon            1..110
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     exon            111..306
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     CDS             117..2000
                     /gene="Gbp7"
                     /note="guanylate-binding protein 4"
                     /codon_start=1
                     /product="uncharacterized protein LOC685067"
                     /protein_id="NP_001396037.1"
                     /db_xref="GeneID:685067"
                     /db_xref="RGD:1583235"
                     /translation="MASASSMEAPICLVENENEELRVNPKAINILERITQPVVVVAIV
                     GLYRTGKSYLMNRLAGQNHGFNLGTTVRSETKGIWMWCVPHPCKPKFTLVLLDTEGLG
                     DVEKCDPKNDSWIFALAVLLSSTFVYNSMSTINHQALEQLHYVTELTELIRTKSTPRS
                     EEIDDSDEFVGFFPDFIWVVRDFVLELKLDGRVITADEYLENALKLIPGRSLKAQNSN
                     LPRECIRHFFPRRKCFVFDRPIKEKELLVHVEEMPEDELDHNFREQSNVFCSYIFSNA
                     KAKTLKEGIMVNGNRLATLVTTYVDAINSGAVPCLENAVTTLAQRENSAAVQKAAEHY
                     SEQMAQRLRLPTDTLQELLDVHSACEKEAIAVFMEHSFKDENQEFQKNLVVTIVEKRE
                     DFSRQNEAASLSHCQAELDKLSESLRESISCGAFSVPGGHSLYLEARKKVEQDYEQVP
                     RKGVKANHVLQSFLQSQIVIENSILQSDKALTVNQKAMEVERAQKEAAEKEQELLRQK
                     QKELQQVMESQERSYKENIVQLHEKMETERKNILEKQEEMLAHKLKVQEEMLNEGFKR
                     KYEAMDSEISQLQKQIQQNKEQNSSLAAQIFDGFGNVLMSVLPGTGKLFGLGLKILSR
                     KMK"
     exon            307..434
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     exon            435..544
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     exon            545..741
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     exon            742..987
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     exon            988..1268
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1269..1481
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1482..1584
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1585..1778
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
     exon            1779..3373
                     /gene="Gbp7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atatccggct tgactctaac gtttaagtat agagcttttt ggaggaatca ggcgctgcag
       61 cagcaagcct agggagctga gcccaggaag cagagaatct tccggtgcag gttaccatgg
      121 catctgctag cagcatggag gctcccattt gtctagtgga aaatgagaat gaagagctga
      181 gggtgaaccc caaagctata aacattcttg agaggatcac tcagcctgtg gtggtggtgg
      241 ccattgtagg actgtaccgt acggggaagt cctacctgat gaaccgcttg gccggacaga
      301 accatggctt caatttgggc accacagtta ggtctgaaac taagggcatc tggatgtggt
      361 gtgtgcctca cccctgcaag cccaaattca cactcgtgct cctggacaca gagggcttag
      421 gtgatgtgga aaagtgtgac cctaagaatg actcgtggat cttcgccctg gccgtgcttc
      481 tgagcagcac ctttgtctac aatagcatga gcaccatcaa ccaccaggcc ctggagcagc
      541 tgcactatgt cacagaactg acagagctga tcaggacaaa atccacccca cgatctgaag
      601 aaatagatga ctctgatgag tttgtaggtt tcttcccaga ctttatctgg gttgttcgag
      661 atttcgttct ggagctgaag ttagatggac gtgtcatcac agcagacgag tacctggaga
      721 atgccctgaa gctaatccca ggcaggagtc tcaaagccca aaattctaac ttgcccaggg
      781 aatgcatccg gcacttcttt ccaagacgga agtgctttgt ctttgatcga cctataaaag
      841 aaaaagaact cttagtccat gttgaagaaa tgccagagga cgagttggat cacaatttcc
      901 gagagcaatc aaatgtattc tgttcgtata tcttctccaa tgcaaaggcc aagaccttga
      961 aagagggaat catggtcaat ggaaacagac tggcgaccct ggtgacaacc tacgtggatg
     1021 ctatcaatag tggagcggtg ccgtgtttag agaacgcagt gacaaccctg gcccaacgtg
     1081 agaactctgc agccgtgcag aaggcagctg agcactacag tgagcagatg gcccagcgac
     1141 taaggctccc cacagacacg ctccaggagc tgctggatgt gcactcggcc tgtgagaagg
     1201 aagccatcgc tgtcttcatg gagcactcct tcaaggatga gaaccaggaa ttccagaaga
     1261 acttggtggt gaccatagtg gaaaaaaggg aagatttctc ccgacagaat gaagctgcat
     1321 ctctcagtca ctgccaagct gaactggaca agctctcaga gtccctgagg gagagcatct
     1381 catgtggagc tttctctgtt cctgggggcc acagtctcta cctagaggcc aggaagaagg
     1441 ttgagcagga ctatgagcaa gtgcccagga agggagtgaa ggcaaatcat gttcttcaga
     1501 gcttcctaca gtcacagatt gtcatagaga attccatcct gcagtcagac aaagccctca
     1561 ctgttaacca gaaggccatg gaagttgagc gggctcagaa ggaggcagct gagaaggagc
     1621 aggagctact aagacagaaa cagaaggaat tgcaacaggt gatggagtct caagagagaa
     1681 gttacaagga aaatatagtc cagctgcatg agaaaatgga gacagaaagg aagaacattc
     1741 tggaaaaaca agaggagatg ctggcacaca agttaaaggt ccaagaagag atgcttaatg
     1801 agggatttaa aaggaaatat gaagcaatgg attcagagat aagtcaacta caaaaacaga
     1861 ttcaacaaaa caaggagcag aatagctcat tggctgcaca aatcttcgat gggtttggaa
     1921 atgtattaat gtcagtattg cctggtactg gtaagctttt tggtctaggg ctgaaaattt
     1981 taagcagaaa aatgaaatag ccaaagaatt cttgttagaa aactataggt atgactttcc
     2041 ccacctcact gatacttatt tttgaagccc atttcacatt aatttcattt actaagtttc
     2101 caaaaccaag aatacaggtc actcaccata aactaatggc aaagtcccat tgctaaagat
     2161 aacatgataa gactcattga acaacagaga actcaagttg gtacccatag atccttcacc
     2221 ctacatgcta acatctttgt cacagaaaga tactctgcat gctaccaaag gaaaagcaca
     2281 aactccagcc cagccacaaa ccttttgatt tacaatggtg tcctgcctgc aaaatctgca
     2341 aatgcagtga tggcataaat cttgggggag caaccaacca atgtctgatt tgatttaagg
     2401 ctatcaaagg atgaaaccca tacctgactc tgcttgagtg accaagaacc tgagattaga
     2461 tagccaaggt aaccaaagga aaaccaaaca ccattgttgt cttttctttt aaataatgta
     2521 ataaaatgac tcttactcac attctgctat gctcgtagat cattcaaaat agttacatct
     2581 tatagaagag tttgaataca cattttactg tatacatatg ttatgtttaa aatcaaaacc
     2641 tgttcaaaaa gaaaaatact tttattttta tctggtcatg aactaatttg aaattttcgt
     2701 tttaggttaa aaaaagttcg agaatatgtc tcttatgcat acattaaaat agctataatt
     2761 tgaatttaaa gaatctagac tataggtgaa aattatttaa atttatttat aggtaataaa
     2821 gactgattag aacactcaca catacactgt atgcagctga atatgttgcc aaattatggt
     2881 tgtttatgaa ccattgcttt ggtttccttc ttttttttta actgaccgag accatgctaa
     2941 caagaattgt tatgaatggg tgctactcga gaccatacta acaagcatct ttatgaatgg
     3001 gtgctacctg agaccatgct atcaatcatc tttatgaatg ggtgctactc gagaccatcc
     3061 taaaaagcat ctttatgaat tggtgctacc tgacatgcag accatttgta tggactagat
     3121 aaaatgttaa ttatgaagtc ctgtgctcat gtttggattt aaatttaaaa caatttcaaa
     3181 cagtcatttg ctattttgct ttcctctgta gaatgtaaac ttacttcagt tatcccacca
     3241 gtaaagtttt atttggggta agaaattttc cattgaattc ttgtgttgta atgtgggaaa
     3301 atgtcatgtt tttttttttt tttattttca caatttctat cgatgtgaaa taaaatttaa
     3361 ttttggcaaa aaa
//
