LOCUS       XM_006250609            2147 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus guanylate binding protein family
            member 6 (Gbp6), mRNA.
ACCESSION   XM_006250609
VERSION     XM_006250609.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006250609.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006250609.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2147
                     /gene="Gbp6"
                     /note="guanylate binding protein family member 6; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 35 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305139"
                     /db_xref="RGD:1561523"
     CDS             342..2003
                     /gene="Gbp6"
                     /codon_start=1
                     /product="guanylate-binding protein 6-like"
                     /protein_id="XP_006250671.3"
                     /db_xref="GeneID:305139"
                     /db_xref="RGD:1561523"
                     /translation="MAPICLVENHNERLSVNQKAIEILDKISQPVVVVAIVGLYRTGK
                     SYLMNCLAGQNHGFPLGSTVQSQTKGIWMWCVPHPTKPKHTLVLLDTEGLGDVEKGDP
                     KNDSWIFALAVLLSSTFVYNSLSTINHQALEQLYYVTELTKLIRARSSPNPDGIKNST
                     EFVSFFPDFVWTVRDFMLELTLNGKNITSDEYLENALKLIPGNSPRIQASNLPRECIR
                     QFFPNRKCFVFDRPTHDKELLQKLETISEDQLDPNFREGTKAFVSYIFTYAKMKTLRE
                     GIKVTGNRLGTLVTTYVDAINSGAVPCLDDAVTTLAQRENSVAVQKAVDHYSEQMAQR
                     LRLPTDTLQELLDEHTACEKEAISVFMEHSFKDENQLFLKKLVKLIGEKKGLFVLKNE
                     EASDKYCQEELDRLSKDFMENISTFSVPGGHRLYVDMREKIERDYWQVPRKGVKASEV
                     FQSFLQSQVIIESSILQADTALTAGEKAIAEERTQREAAEKEQELLRQKQREQQQLME
                     AQEKSNKENLEQLREKLVQERKQLIEEHNMMLEKQLKDQKAYLEE"
ORIGIN      
        1 gaggaagctt gtggcccctt ggctgcaaca gagtatctca ctggcttttc tcacagccag
       61 catcctctca cctccccctc cagccttggc taaattagca aggccttggt ttactttact
      121 ttcagtttct tttttgctgc agcatgtgat tttttttcaa tgtgtgtggg gtggtggttg
      181 tggtgatggg tggtggtcag ctcacataaa agaggagcaa agagagtgag ggaggagagc
      241 agaagtgagc cagaggcagc agcagaggag agctgcactt gaacctgtct gtgggaccag
      301 attcgtctag aggttagcag gttgctgtga cccaaccaca aatggctccc atttgtctgg
      361 tggaaaacca caatgaacgg ctgtcagtga accagaaagc catagagatt ctggacaaga
      421 tttctcagcc agtggtagtc gtggctattg ttggattgta tcgtacaggg aagtcctatt
      481 tgatgaactg tctggcagga cagaatcacg gcttccctct gggctctaca gtgcagtcgc
      541 agaccaaggg catctggatg tggtgcgtgc cacaccccac caagccaaag cacaccctgg
      601 tcctcctgga caccgagggc ctaggggatg tggaaaaggg tgatcctaag aatgactcct
      661 ggatcttcgc cctggcagtg cttctgagca gcaccttcgt ctacaacagc ctaagcacca
      721 tcaaccacca ggccctggag cagctgtact atgttacaga actcactaag ctgatcagag
      781 caaggtcttc cccaaatcct gatggaatca agaattccac agagtttgtg agtttctttc
      841 cagactttgt ctggactgtt cgagatttca tgctggagct gacgttaaat gggaaaaaca
      901 tcacaagtga tgagtaccta gagaatgccc tgaaattgat cccaggcaac agtcccagaa
      961 tccaagcatc caatttgccc agggaatgca tcagacaatt ctttcctaac cggaagtgtt
     1021 ttgtctttga ccggccaaca catgacaaag aactcttaca aaaacttgag accatctcag
     1081 aagaccagtt ggatcctaac ttccgggaag gaacaaaggc ttttgtttct tacatcttca
     1141 cttatgccaa gatgaagacc ctcagagagg gaattaaggt caccgggaat cgactgggga
     1201 ctctggtgac aacctacgtg gatgccatca acagtggagc ggtaccttgt ctggatgatg
     1261 cggtgacaac tctggcccag cgtgagaact cagtagctgt gcagaaggca gtggaccact
     1321 acagtgagca gatggcccag agactgaggc tccccacaga cacactccag gagctgctgg
     1381 atgagcacac agcttgtgag aaggaagcca tctctgtctt catggagcac tccttcaagg
     1441 atgagaatca gctgttcctg aagaagctgg tgaaattaat aggtgagaag aaagggcttt
     1501 ttgtgttgaa gaatgaagaa gcatcggata aatactgcca ggaagagctg gatcgacttt
     1561 cgaaggattt tatggaaaat atctcgacat tttctgttcc tgggggacac aggctctacg
     1621 tggacatgag ggagaagatt gaacgtgact actggcaggt gcccaggaaa ggggtgaagg
     1681 caagtgaagt cttccagagc tttctgcagt cacaggtcat cattgagagt tcaatcctgc
     1741 aggcagatac agccctcact gcaggggaga aggccattgc agaggagcgc acccagaggg
     1801 aggcagccga gaaggagcag gagctgctaa gacagaagca gagggagcag caacagttaa
     1861 tggaggctca agagaaaagt aacaaggaaa acctagagca actgagagag aagctggtcc
     1921 aggagagaaa gcagctcatt gaagaacata acatgatgtt ggagaagcaa ctgaaggatc
     1981 aaaaggctta ccttgaggaa taagctatca catcaagtat atgaagcaaa acagtggttc
     2041 catcgtggac catatcttaa gaggatttgc ttcagtgatt tttgctcccg ttttactggt
     2101 tggggaggct ataagaggca ttgcttcatt gtttaaatag gattgac
//
