LOCUS       XM_006231501            5836 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus golgi brefeldin A resistant guanine
            nucleotide exchange factor 1 (Gbf1), transcript variant X7, mRNA.
ACCESSION   XM_006231501
VERSION     XM_006231501.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006231501.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006231501.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5836
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5836
                     /gene="Gbf1"
                     /gene_synonym="RGD1307160"
                     /note="golgi brefeldin A resistant guanine nucleotide
                     exchange factor 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 70 ESTs, 3 long
                     SRA reads, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 213
                     samples with support for all annotated introns"
                     /db_xref="GeneID:309451"
                     /db_xref="RGD:1307160"
     CDS             260..5836
                     /gene="Gbf1"
                     /gene_synonym="RGD1307160"
                     /codon_start=1
                     /product="Golgi-specific brefeldin A-resistance guanine
                     nucleotide exchange factor 1 isoform X7"
                     /protein_id="XP_006231563.1"
                     /db_xref="GeneID:309451"
                     /db_xref="RGD:1307160"
                     /translation="MVDKNIYIIQGEINIVVGAIKRNARWSTHIPLDEERDPLLHSFS
                     HLKEVLNSGTELSEIEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSCALIDPTH
                     EGTAEGMENMADAVTHARFVGTDPASDEVVLMKILQVLRTLLLTPVGTHLTNESVCEI
                     MQSCFRICFEMRLSELLRKSAEHTLVDMVQLLFTRLPQFKEEPKSYVGTNLKKLKMRA
                     GGMSDSSKWKKQKRSPRPPRHTTKVMPGSELPTPNGAALSSNLTGGMPFIEAPTSISS
                     ASSEAASTVVSPCTDSGLELSSQATSKEDLTDLEQAGSPREITTTEPGSTEIGVSDQL
                     DPQQEGAHVEKAQSASVESIPEVLEECTSPTDHSDSASVHDMDYVNPRGVRFTQSSQK
                     EGTALVPYGLPCIRELFRFLISLTNPHDRHNSEVMIHMGLHLLTVALESAPVAQCQTL
                     LGLIKDEMCRHLFQLLSVERLNLYAASLRVCFLLFESMREHLKFQLEMYIKKLMEIIT
                     VENPKMPYEMKEMALEAIVQLWRIPSFVTELYINYDCDYYCSNLFEDLTKLLSKNAFP
                     VSGQLYTTHLLSLDALLTVIDSTEAHCQAKVLNTLNQQEKKETARPGFEAVDGSPDTY
                     KSERAASDGKATGVPSDAPGLHFSSGGWLSTEHGKPGCSDLEEAGDSGVDKKTTRKPP
                     RFSCLLPDPRELIEIKNKKKLLITGTEQFNQKPKKGIQFLQEKGLLTIPMDNTEVAQW
                     LRENPRLDKKMIGEFVSDRKNMDLLESFVSTFSFQGLRLDEALRLYLEAFRLPGEAPV
                     IHRLLEVFTEHWRSCNGSPFANSDACFALAYAVIMLNTDQHNHNVRKQNAPMTLEEFR
                     KNLKGVNGGKDFEQDILEDMYHAIKNEEIVMPEEQTGLVRENYVWSVLLHRGATPEGI
                     FLRVPPGSYDLDLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLS
                     DVFDNLIISLCKFTALSSESIENLPSVFGSNPKAHIAAKTVFHLAHRHGDILREGWKN
                     IMEAMLQLFRAQLLPKAMVEVEDFVDPNGKISLQREETPSNRGESTVLSFVSWLTLSG
                     PEQSSVRGPSTENQEAKRVALDCIKQCDPEKMITESKFLQLESLQELMKALVSVTPDE
                     ETYDEEDAAFCLEMLLRIVLENRDRVGCVWQTVRDHLYHLCVQAQDFCFLVERAVVGL
                     LRLAIRLLRREEISGQVLLSLRILLLMKPSVLSRVSHQVAYGLHELLKTNAANIHSGD
                     DWATLFTLLECIGSGVKPPDALQATARADAPDAGAQSDSELPSYHQNDVSLDRGYTSD
                     SEVYTDHGRPGKMHRSATDADMANSGWLVVGKDDIDNSKPAAGLSRPGPSPLVNQYSL
                     TVGLDLGPHDTKSLLKCVESLSFIVRDAAHITPDNFELCVKTLRIFVEASLNGGCKSQ
                     DKRGKSHKYDSKGNRFKKKPKEGSMLRRPRASSQHATRAGHSDEEEDEGVPASYHTVS
                     LQLLDLMHTLHTRAASIYSSWAEEQRHLETGGRKIEADSRTLWAHCWCPLLQGIACLC
                     CDARRQVRMQALTYLQRALLVHDLQKLDALEWESCFNKVLFPLLTKLLENISPADVGG
                     MEETRMRASTLLSKVFLQHLSPLLSLSTFAALWLTILDFMDKYMHAGSSDLLSEAVPE
                     SLKNMLLVMDTAEIFHSADARGGSPSALWEITWERIDCFLPHLRDELFKQTVIQDPMP
                     TEPHSQKPLASTHLTPAAGDPRMPGHPPPPEIPSEVGACDPEKPESTRAASSSSPGSP
                     VASSPSKQSPAPEGPPPLAQPPLILQPLTSPLQVGVPPMTLPIILNPALIEATSPVPL
                     LATPRPTDPIPTSEVN"
ORIGIN      
        1 agttaccacg tcagtgagct gacagggaag gtagccggta ccaccgaccg tcccggccca
       61 cttattccgg cctgcagtga ggtctcaccc taaagttagg gtcgacttcc agacgacagg
      121 ctccttccct tctctcactc gctgccggcg ccgggagagt ggctgggaga cgcctccggg
      181 gccaagctgg acatgagctg cggctgccgg tcctgggact aggccccgcc attttggatc
      241 ctctgacagg tttgtcagga tggtggataa gaatatttac atcattcaag gagaaattaa
      301 cattgttgtt ggtgccatca aacgaaatgc ccgatggagc acccatatac cactggatga
      361 agagcgggat ccccttttgc acagtttcag ccatctaaag gaggtcttaa acagtgggac
      421 agaactctca gagattgagc caaatgtatt ccttcgtcca tttctggaag tcattcgctc
      481 tgaagacacc actggtccta tcaccggcct ggcactcacc tctgtcaaca agttcctgtc
      541 ctgtgcactc atagatccaa ctcatgaggg cacggcagag ggcatggaga acatggcaga
      601 tgctgtcact catgcccgtt ttgtgggcac agatcctgcc agtgatgaag ttgtcctgat
      661 gaaaatcctt caggttctcc ggactttgtt gctaacccca gtgggtaccc acttaacaaa
      721 tgaatctgta tgtgagatta tgcagtcttg cttccggatt tgctttgaaa tgaggctcag
      781 tgagttattg agaaaatccg cagagcacac tctcgtagac atggtgcagc tgctcttcac
      841 aaggttaccg cagtttaaag aagaacccaa gagttacgtg ggaaccaact tgaagaagct
      901 gaaaatgaga gcaggaggca tgagtgactc atccaagtgg aagaaacaga agcgatcccc
      961 tcgacctcca cgtcatacaa ccaaagtcat gccaggttca gagctgccca ccccaaatgg
     1021 agccgcctta tcctctaacc ttactggtgg catgcccttc attgaggcac ccacatccat
     1081 ctcctctgca agttcagaag ctgcctccac agtggtcagt ccctgtacag atagtggcct
     1141 ggaattatcc tcccaggcta cctccaagga ggacctcacc gacctggagc aagctggctc
     1201 cccaagggag atcaccacca cagagcctgg gagcactgag ataggagttt ctgatcagct
     1261 tgaccctcag caggaagggg cccatgtaga aaaggcccag tcagcatcgg tggaatctat
     1321 ccctgaagtg ctagaggagt gcacatcccc tactgaccat tctgactctg cctctgtcca
     1381 tgacatggat tatgtcaatc ctcggggcgt gcgctttacc cagtcctccc agaaagaagg
     1441 cacagctttg gttccttatg gtcttccttg catccgtgag ctcttccgct tccttatctc
     1501 cctcacaaat ccacatgacc gccataactc tgaggttatg atccacatgg gacttcattt
     1561 gctgacagta gctcttgagt cagcccctgt ggcccagtgc cagaccctct tgggtctcat
     1621 caaggatgag atgtgccgac acttattcca gctactcagc gtagagcggc tgaaccttta
     1681 cgctgcttcc ctacgagtgt gctttttgct ctttgagagc atgcgggaac acctcaagtt
     1741 ccagttggag atgtacatca aaaagctcat ggagattatc actgttgaaa accccaagat
     1801 gccttatgag atgaaggaga tggcgctgga ggccattgtg cagctctggc gcatccccag
     1861 cttcgtcacg gagctctaca tcaactatga ctgtgactac tactgctcca acctcttcga
     1921 agacctcact aagctgctgt ccaagaatgc ctttcctgtg tctggccagc tttatacaac
     1981 acacctgctg tctcttgatg ccctattgac agttattgac agcactgagg ctcattgtca
     2041 ggccaaagtc ctcaacaccc tcaaccagca agagaagaaa gagacagcca gacctggctt
     2101 tgaggcagtg gatggcagcc cagacactta caagtctgag agagcagcca gtgatgggaa
     2161 agccacagga gtgccctcag atgctccagg ccttcatttt tcaagtggag ggtggttgtc
     2221 aacagaacat ggaaagccag ggtgcagtga tctggaggaa gctggtgact ctggggttga
     2281 caaaaagacc accaggaagc cacctcgatt ttcctgtctt ctgccagatc cacgggaact
     2341 aattgaaatt aaaaacaaaa aaaagctgct gatcactggt acagagcagt tcaaccaaaa
     2401 accaaagaag gggatccagt ttctgcagga gaaaggcctc ctcaccatcc caatggataa
     2461 cacagaggta gcccagtggc tccgagaaaa ccctcggcta gacaaaaaaa tgattggaga
     2521 gtttgtgagt gaccgcaaaa acatggacct gttggagagt tttgtgagca ccttcagctt
     2581 ccagggtctg aggcttgatg aggctctccg cctctaccta gaagccttcc gtctgcctgg
     2641 ggaagcgcct gttattcaca ggctgctgga ggtgttcact gagcactgga ggagttgtaa
     2701 tggctcccca tttgctaata gcgatgcctg ctttgccctg gcctatgctg ttatcatgct
     2761 taacactgac caacataacc acaatgttcg caagcaaaat gcacccatga ccctggagga
     2821 gttccgcaaa aacctgaaag gtgtgaatgg aggcaaggac tttgagcaag acatcctgga
     2881 agacatgtac catgccatca agaatgagga aattgtgatg cctgaggaac aaacaggtct
     2941 ggttcgtgag aattatgtgt ggagtgtgct gcttcatcga ggtgctaccc ctgagggcat
     3001 cttccttcgt gtaccccctg gcagctatga tcttgacctc ttcactatga cctggggccc
     3061 cactattgct gctctctctt atgtgttcga taaaagcctc gaggagacca tcatccagaa
     3121 agccatctca ggcttcagga agtgtgccat gatctccgcc cactatggcc tcagcgatgt
     3181 gtttgacaat ctcatcatct ctctgtgcaa attcacagct ctaagtagtg agtctattga
     3241 gaacctgccc agtgtattcg gaagcaaccc taaagcccac attgcagcca agacagtatt
     3301 ccatttggcc catcgtcatg gtgacatcct tcgggagggc tggaagaata tcatggaggc
     3361 catgctgcag ctcttccgag cccaactttt accgaaggct atggtagagg tagaagattt
     3421 tgtggatccc aatggtaaga tctctctaca gcgggaggag acaccatcaa accgaggaga
     3481 gtcaacagtc cttagttttg taagctggct gacactgagt ggtcctgagc agtccagtgt
     3541 ccggggccca tcgacagaga accaagaggc caagcgagta gccttggact gcatcaagca
     3601 atgtgaccca gaaaagatga tcacagaaag caagttcctc cagctggaat ctctgcagga
     3661 gctcatgaag gctctggtct cggtgacacc agatgaagag acatatgatg aagaagatgc
     3721 tgctttctgt ctggagatgc tgctaaggat tgtgttagaa aacagggacc gtgtgggctg
     3781 tgtatggcag actgttcgag atcatctata ccacctgtgt gttcaggcac aagatttctg
     3841 cttccttgtg gagcgagcag tggtagggct gctacgccta gccattcggc tactccgaag
     3901 agaagagatt agtggccagg tcctgctctc tctgcgcatc ttgttactga tgaagcccag
     3961 cgtgctgtcc agagtcagcc accaggtcgc ttatgggctg catgaactcc tcaagaccaa
     4021 tgctgccaac atccactcgg gtgatgactg ggccactctc ttcacattgc tggagtgcat
     4081 tggctcaggc gtgaagcctc cagatgctct acaagccaca gccagggctg atgctcctga
     4141 tgctggagca caatccgaca gtgagctccc atcctaccat caaaatgatg tcagcctaga
     4201 ccgagggtac acttccgact cagaagtcta cactgaccat ggcaggcctg gcaagatgca
     4261 ccgatcagcc acagacgctg acatggccaa cagtggttgg ttagtggtgg ggaaggatga
     4321 cattgataac tccaaaccag cagcaggact cagcaggcca ggcccttcgc ccttggtcaa
     4381 tcagtacagc cttacagtgg gcctggacct gggaccacat gacactaagt ccttgcttaa
     4441 gtgtgtggag tctctgtcct tcattgttcg tgatgctgct cacatcaccc ctgacaactt
     4501 tgaactctgc gtcaagaccc tccgcatctt tgtagaagcc agtctgaatg gtgggtgcaa
     4561 gtcccaggat aaacgtggca agagtcataa atatgacagc aaagggaacc ggttcaagaa
     4621 aaagcccaag gagggctcga tgcttcggcg gccccgggca tccagccagc atgccactcg
     4681 ggctggacac agtgatgaag aggaggacga aggcgtgcct gccagctacc atacggtgtc
     4741 tttacagttg ctagacctga tgcacaccct gcacacacgg gcagcctcta tctacagttc
     4801 atgggcagag gagcaacgcc acctggagac aggtggccgg aagattgaag ctgactcacg
     4861 taccctctgg gcccactgct ggtgcccttt attacaaggt atcgcttgct tatgctgtga
     4921 cgcccggcgc caggtgcgga tgcaggccct gacatatctc cagcgagccc ttctggtaca
     4981 tgacctgcaa aagctagatg ccctggaatg ggagtcctgt tttaacaagg tgctgtttcc
     5041 gctactgacc aagcttttag aaaatatcag ccctgcggat gtgggcggga tggaggagac
     5101 ccggatgcgg gcttccacac tgctctcaaa ggtcttcctg cagcacctgt ccccactgct
     5161 gtccctgtcc acctttgctg ccctgtggct caccatcctg gacttcatgg acaagtacat
     5221 gcacgcaggt tccagtgact tgctgtcaga agctgtccct gagtctctga agaacatgct
     5281 ccttgtgatg gacacagcag agattttcca cagtgcagat gcaaggggag gcagcccctc
     5341 tgctctctgg gagatcacct gggagcgcat cgattgcttc ttaccacacc tacgtgatga
     5401 actcttcaag cagactgtca tccaggaccc catgcccaca gagcctcaca gtcaaaaacc
     5461 tctggcttct actcacctga cgcctgctgc tggtgacccc aggatgcctg gccatccacc
     5521 tcctccagag ataccctcag aagtgggagc ttgtgacccg gagaagcccg agagcaccag
     5581 agctgccagc agcagctccc ctggatcgcc ggtggcctct agccccagca aacagagtcc
     5641 tgccccagag ggacctcccc cactggccca gcccccacta atcctacagc ccttgacctc
     5701 cccactgcag gtgggggtac cacccatgac tttgcccatc atcctcaacc ctgcactcat
     5761 tgaggccacc tctccagtgc ctctcttagc cacgccacgc cctacagacc ccatccccac
     5821 ctctgaggtc aactaa
//
