LOCUS       NM_001004225            1301 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus glutamine amidotransferase class 1 domain
            containing 3A (Gatd3a), mRNA; nuclear gene for mitochondrial
            product.
ACCESSION   NM_001004225 XM_215368
VERSION     NM_001004225.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1301)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1301)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   3  (bases 1 to 1301)
  AUTHORS   Li,X.P., Pleissner,K.P., Scheler,C., Regitz-Zagrosek,V.,
            Salnikow,J. and Jungblut,P.R.
  TITLE     A two-dimensional electrophoresis database of rat heart proteins
  JOURNAL   Electrophoresis 20 (4-5), 891-897 (1999)
   PUBMED   10344264
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079380.1.
            
            On Sep 10, 2004 this sequence version replaced XM_215368.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079380.1, FQ216416.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1301
                     /gene="Gatd3a"
                     /gene_synonym="C21orf33; ES1; RGD1303003"
                     /note="glutamine amidotransferase class 1 domain
                     containing 3A"
                     /db_xref="GeneID:294326"
                     /db_xref="RGD:1303003"
     exon            1..145
                     /gene="Gatd3a"
                     /gene_synonym="C21orf33; ES1; RGD1303003"
                     /inference="alignment:Splign:2.1.0"
     CDS             11..811
                     /gene="Gatd3a"
                     /gene_synonym="C21orf33; ES1; RGD1303003"
                     /note="ES1 protein homolog, mitochondrial; homolog of
                     zebrafish ES1; glutamine amidotransferase like class 1
                     domain containing 3A"
                     /codon_start=1
                     /product="ES1 protein homolog, mitochondrial precursor"
                     /protein_id="NP_001004225.1"
                     /db_xref="GeneID:294326"
                     /db_xref="RGD:1303003"
                     /translation="MAAVRVLVSPRLASALLPLSGRHRTTSQRAAIHSSAPRPRARVA
                     LVLSGCGVYDGTEIHEASAILVHLSRGGAEVHIFAPDVPQMHVIDHTKGEPSEKESRN
                     VLAESARIARGKITNLAQLSAANHDAAIFPGGFGAAKNLSTFAVDGKDCKVNKEVERV
                     LKEFHGAKKPIGLCCIAPVLAAKVIKGVEVTVGHEQEEGGKWPYAGTAEAVKALGAKH
                     CVKGVTEAHVDQKNKVVTTPAFMCETELHHIHDGIGAMVKKVLELTGK"
     exon            146..198
                     /gene="Gatd3a"
                     /gene_synonym="C21orf33; ES1; RGD1303003"
                     /inference="alignment:Splign:2.1.0"
     exon            199..312
                     /gene="Gatd3a"
                     /gene_synonym="C21orf33; ES1; RGD1303003"
                     /inference="alignment:Splign:2.1.0"
     exon            313..432
                     /gene="Gatd3a"
                     /gene_synonym="C21orf33; ES1; RGD1303003"
                     /inference="alignment:Splign:2.1.0"
     exon            433..525
                     /gene="Gatd3a"
                     /gene_synonym="C21orf33; ES1; RGD1303003"
                     /inference="alignment:Splign:2.1.0"
     exon            526..682
                     /gene="Gatd3a"
                     /gene_synonym="C21orf33; ES1; RGD1303003"
                     /inference="alignment:Splign:2.1.0"
     exon            683..1277
                     /gene="Gatd3a"
                     /gene_synonym="C21orf33; ES1; RGD1303003"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccttcgcg atggctgctg tcagggttct ggtgtcgccg aggttggctt ctgcgctcct
       61 accgctctca gggcgccacc ggactacctc ccagcgcgca gccattcaca gctccgcacc
      121 gcggccccgg gccagggtgg cgttggtgct gtcgggctgc ggagtctatg acggaaccga
      181 gatccacgag gcctcagcga tcctggtgca cctgagccga ggcggagctg aggtccatat
      241 ctttgctcct gatgtccctc agatgcacgt gattgaccac accaaggggg agccttctga
      301 gaaggaaagc aggaacgttt tggctgagtc agcaaggatc gcccgaggca agatcaccaa
      361 cctggctcag ctcagcgctg ctaaccacga tgctgccatt ttccctggag gctttggggc
      421 tgccaaaaac ctgagcacat tcgctgtgga cgggaaggac tgcaaggtta acaaggaggt
      481 ggagcgtgtc ctgaaggaat tccacggagc caagaagccc attggcctat gctgcatcgc
      541 tcctgtcctc gcagccaaag tgatcaaagg tgtggaggtc accgtgggcc atgagcaaga
      601 ggaggggggc aagtggccat atgctggaac cgcggaagcc gtcaaagccc tgggtgccaa
      661 gcactgtgtg aagggtgtga ccgaagctca cgtcgaccag aaaaacaagg tggtcaccac
      721 cccggccttc atgtgtgaga ccgaactcca ccacatccac gacgggattg gggccatggt
      781 gaagaaggtg ctggaactca cgggaaagta acaccaccag caccacgctt ggcctccgtc
      841 gtcgctgtgg cacgctcagc ctgtgtgctc cggtcagcca ggacacggga gctgctgttc
      901 tattagaagc atagacactt tgtgcctgaa ggaggagctt tgcaactatg cgtccaacct
      961 tggcttctac cagccggaag ccagagtctc accaagggcc ccaggtagca gcaggaattt
     1021 cactgggggc tggcctcact gtgtgtcccc attgggtggt ctgggcacct tttccagagc
     1081 ctggttcaag gactcacgtt gtgcagtcct aggtctgatg gatcgggtac taaagctcta
     1141 aaagaagaaa accatttagg ctccaagtct tcggagatat gtccagagta agcacagcta
     1201 actgcagcca gggggattct gtagtagatc cctgcagcca tacaataaac tcttttccac
     1261 agtggaaact ccttccaaaa aaaaaaaaaa aaaaaaaaaa a
//
