LOCUS       NM_001108339            1967 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus glutamyl-tRNA amidotransferase subunit C (Gatc),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001108339 XM_001077390 XM_341095
VERSION     NM_001108339.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1967)
  AUTHORS   Echevarria,L., Clemente,P., Hernandez-Sierra,R., Gallardo,M.E.,
            Fernandez-Moreno,M.A. and Garesse,R.
  TITLE     Glutamyl-tRNAGln amidotransferase is essential for mammalian
            mitochondrial translation in vivo
  JOURNAL   Biochem J 460 (1), 91-101 (2014)
   PUBMED   24579914
REFERENCE   2  (bases 1 to 1967)
  AUTHORS   Nagao,A., Suzuki,T., Katoh,T., Sakaguchi,Y. and Suzuki,T.
  TITLE     Biogenesis of glutaminyl-mt tRNAGln in human mitochondria
  JOURNAL   Proc Natl Acad Sci U S A 106 (38), 16209-16214 (2009)
   PUBMED   19805282
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473973.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_341095.2, XM_001077390.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CD373293.1, CK599810.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..1967
                     /gene="Gatc"
                     /gene_synonym="RGD1309698"
                     /note="glutamyl-tRNA amidotransferase subunit C"
                     /db_xref="GeneID:360821"
                     /db_xref="RGD:1309698"
     exon            1..317
                     /gene="Gatc"
                     /gene_synonym="RGD1309698"
                     /inference="alignment:Splign:2.1.0"
     CDS             10..477
                     /gene="Gatc"
                     /gene_synonym="RGD1309698"
                     /note="gatC-like protein; glu-AdT subunit C;
                     glutamyl-tRNA(Gln) amidotransferase, subunit C;
                     glutamyl-tRNA(Gln) amidotransferase subunit C,
                     mitochondrial-like"
                     /codon_start=1
                     /product="glutamyl-tRNA(Gln) amidotransferase subunit C,
                     mitochondrial"
                     /protein_id="NP_001101809.1"
                     /db_xref="GeneID:360821"
                     /db_xref="RGD:1309698"
                     /translation="MWAQAARVQFRAPLDRGRSFASKVGPRGKVQAADPKTQAPRLVP
                     EGTDRVSAAVVEHLERLALVNFSSREAVDRLEKAVAFADQLHAVDTDGVEPLESVLED
                     RCLYLRSDKVAEGGCAEELLQNSNHVVEEYFVAPPGNIPLPDMVGKVPSSTAE"
     exon            318..421
                     /gene="Gatc"
                     /gene_synonym="RGD1309698"
                     /inference="alignment:Splign:2.1.0"
     exon            422..1967
                     /gene="Gatc"
                     /gene_synonym="RGD1309698"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaagcaaaga tgtgggcaca ggcggcgagg gtgcaatttc gggctcctct ggaccggggc
       61 cgaagttttg cttccaaagt gggtccacgc ggaaaggtcc aggcggcgga cccgaagacc
      121 caggctccac gcctagtccc ggagggcacc gatcgcgtgt ccgccgcggt agtcgagcat
      181 ctggagcggc tggcactggt gaacttcagc agccgcgagg cggtggaccg gctagagaaa
      241 gccgtggcct ttgccgacca gctgcacgcc gtggacaccg acggggtgga gcccctggag
      301 tcggttctgg aggacagatg tctctacctg agatctgaca aggtagccga aggcggctgt
      361 gcagaagaac tactacagaa ctcaaatcac gttgtggagg agtactttgt ggccccccca
      421 ggtaatattc ctttgccaga catggtgggc aaggtccctt cttccacagc agagtagctg
      481 ttctgggagg ggtaccctgt caacatggtg gactcacatg ggtggccatc tgctactgtg
      541 aattctagca taatggacat ttaccacttc cccgtaattg atctgaagac aagagctaga
      601 aaactcagct aacggaaaac tacaagcccc cttcgtggat gtggatcaaa tgctcaggcc
      661 tgttctgtat ggaaaacatc ttcctccttt gtctgcccct aaaaacacta ccttgtcaaa
      721 acgtatccat gtggactttt ctgtttacat gtaagacaca gatgacctgt gttgcttttc
      781 caccaccccg tggagagcca gcccatcacc atctgtttct gggtacccac ccaccttatt
      841 cctacatagg gcttgtttta tggctagatt tgagtaatat caaagtaaac tacagcgtgg
      901 gatctcctca ttcagaatca tctttctttc tcagaaagct atccaatccc cacttcacac
      961 tcagtgtcca tgaacagaga ccctctcaca cactgtgtac gtgaacaccg gacaccaccc
     1021 cacccccacc cccatacacc atgcatatga acaccagcca catagttcct ttctgaaaag
     1081 agatcttgta aaaccagccc tgggccagtt ttcatccttc tctttccttt atctgcaagg
     1141 tctgtgtccc ccaccccctt gttcagatag ggcctctgca cacatcaggc tggccttgag
     1201 cacactatct ccctgctgca gcctcccagc acagggatgg gaggcatgaa cccctcagtg
     1261 aactagtgca agcagtttcc tttacagcct cagttctgca ttggaagaac tccacatctg
     1321 gattagagat ccctcagtga ctgagaactt ctaacccagg tgtggtggct cccgtcttta
     1381 atcccagcac ttgggaggca gaggcaaaca gagccctgag ttcaagttca gtctggttta
     1441 caaagccaga attattctaa gaaaccctct ctggaaaaga aaaaagcaga aaaacaaata
     1501 aataaaagcc cagaatttcc tgatcttcgg tctgagctga gtcaggctct gaccgcctag
     1561 aattccagct ctgcagaggc tgatgctgtc tttctggtct ctgaggcact aacacacatg
     1621 cggcataaac atgtgaataa aaaccaatct taaaaagagt ctgggggttg gggatttagc
     1681 tcagtggtag agcgcttgcc tagcaagcac aaggccctgg gttcggtccc cagctccaaa
     1741 gaaaaagaaa aaaaaaaaaa aaaaaaagag tctgcctggg ctggagggat ggctcagtgg
     1801 ttaagagcac ccgactgctc ttccagaggt catgagttca attcccagca accacatggt
     1861 ggctcacaac catctgtaag gagatctgat gccctcttct ggtgtctgaa gacagctaca
     1921 gtatactcat atataataaa tgaataaatc tttaaaaaaa aagagtc
//
