LOCUS       NM_001024888            2383 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus GATA zinc finger domain containing 2B (Gatad2b),
            mRNA.
ACCESSION   NM_001024888 XM_227388
VERSION     NM_001024888.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Basta,J. and Rauchman,M.
  TITLE     The nucleosome remodeling and deacetylase complex in development
            and disease
  JOURNAL   Transl Res 165 (1), 36-47 (2015)
   PUBMED   24880148
  REMARK    Review article
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Mahajan,M.C., Narlikar,G.J., Boyapaty,G., Kingston,R.E. and
            Weissman,S.M.
  TITLE     Heterogeneous nuclear ribonucleoprotein C1/C2, MeCP1, and SWI/SNF
            form a chromatin remodeling complex at the beta-globin locus
            control region
  JOURNAL   Proc Natl Acad Sci U S A 102 (42), 15012-15017 (2005)
   PUBMED   16217013
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097428.1.
            
            On Jun 17, 2005 this sequence version replaced XM_227388.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097428.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760384
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..2383
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /note="GATA zinc finger domain containing 2B"
                     /db_xref="GeneID:310614"
                     /db_xref="RGD:1308533"
     exon            1..198
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     exon            199..534
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     CDS             200..1981
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /note="transcription repressor p66 beta component of the
                     MeCP1 complex"
                     /codon_start=1
                     /product="transcriptional repressor p66-beta"
                     /protein_id="NP_001020059.1"
                     /db_xref="GeneID:310614"
                     /db_xref="RGD:1308533"
                     /translation="MDRMTEDALRLNLLKRSLDPADERDDVLAKRLKMEGHEAMERLK
                     MLALLKRKDLANLEVPHELPTKQDGSGVKSYEEKLNGNLRPHGDNRTAGRPGKENIND
                     EPVDMSARRSEPDRGRLTPSPDIIVLSDNEASSPRSSSRMEERLKAANLEMFKGKGIE
                     ERQQLIKQLRDELRLEEARLVLLKKLRQSQLQKENVVQKTPVVQNAASIVQPSPAHVG
                     QQGLSKLPSRPGAQGIEPQNLRTLQGHSVIRSAANTTLPHMLMSQRVIAPNPAQLQGQ
                     RGPPKPGIVRTTTPNMNPAISYQPQSSSSVPCQRTTSSAIYMNLASHIQPGTVNRVSS
                     PLPSPSAMSDAANSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAANSEFIYMV
                     GLEEVVQSVIDSQGKNCASLLRVEPFVCAQCRTDFTPHWKQEKNGKILCEQCMTSNQK
                     KALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPTTAPAVSSVSKQETIMRHHTL
                     RQAPQPQSSLQRGIPTSARSMLSNFAQAPQLSVPGGLLGMPGVNIAYLNTGIGGHKAP
                     SLADRQREYLLDMIPPRSISQSISGQK"
     exon            535..664
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     exon            665..796
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     exon            797..928
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     exon            929..1099
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     exon            1100..1415
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     exon            1416..1618
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     exon            1619..1729
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     exon            1730..1847
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
     exon            1848..2352
                     /gene="Gatad2b"
                     /gene_synonym="RGD1308533"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgggacaca ctggatttgt ttgccagttc actttttgag ggttgatgga actagaactt
       61 acccttcccg atctcatcag gacttaagag tacttttgcc tctttgggct cagttacctg
      121 aaggagctag ttactcctgt gaatgaagag atttaggtgt taattgctgt cccggagaat
      181 cgtccccgct ctataaagaa tggatagaat gacagaagat gctcttcgtc tgaatctttt
      241 gaagaggagt ttggacccgg cagatgagcg agatgatgtc ctggcaaaac gactgaaaat
      301 ggaggggcat gaggccatgg aacggctgaa aatgttggca ctgctcaaaa ggaaagattt
      361 ggcaaatctt gaggtaccgc atgagttacc taccaaacaa gatggcagtg gtgtcaagag
      421 ttatgaagag aaacttaatg gaaatctcag gcctcatgga gacaacagga ctgctggaag
      481 gccaggcaaa gaaaacatca atgatgaacc tgtggatatg agtgctcgac ggagcgaacc
      541 agaccgagga aggctaactc cttccccaga tataattgtt ttgtctgata atgaggcttc
      601 cagtccccga tccagctccc ggatggaaga gagactcaaa gcagccaacc tagagatgtt
      661 taaggggaaa ggcattgagg aacggcagca gcttattaag caactgaggg atgagctaag
      721 attggaagaa gctcgtctgg tgctgttaaa gaaactgaga cagagtcagc tacagaaaga
      781 gaatgtggtc caaaagactc cagttgtaca gaatgcagca tctattgtcc agccatctcc
      841 tgcacatgtg ggacaacaag gcttatctaa acttccctcc cggcctggag ctcaagggat
      901 tgaacctcaa aatctgagaa cattacaggg tcacagtgtc atccgttcag cagccaacac
      961 cacccttcca cacatgttga tgtctcaacg tgttattgca ccaaatccag cccaacttca
     1021 gggccagcgg gggccaccga aacctggcat tgtacgcacc acaacaccta acatgaatcc
     1081 tgccatcagt taccaaccac agtcaagttc ttctgttccc tgtcagcgca caacgtcgtc
     1141 tgccatctat atgaacctcg cctcccatat tcagccaggg actgtgaaca gagtgtcctc
     1201 accacttcct agccccagtg ccatgagcga tgctgccaac tcacaggctg cagccaaatt
     1261 ggctcttcgg aaacagctgg aaaagacgct cctggagata ccaccaccaa aacctcccgc
     1321 tcccttactt cacttcctgc ctagtgcagc caatagcgag tttatctaca tggtaggcct
     1381 ggaagaagtc gtacagagtg tcattgacag ccaaggcaaa aactgtgcct cacttctgag
     1441 ggtcgaaccc tttgtatgtg cccagtgccg cacagatttc acccctcatt ggaagcaaga
     1501 aaagaatggt aagatcctct gtgagcagtg tatgacttcc aaccagaaaa aggctctaaa
     1561 agctgaacac actaaccggc tgaaaaacgc tttcgttaaa gctctacagc aggaacagga
     1621 aattgagcag cggttacagc agcaggcagc actgtcccca actacagctc cagctgtgtc
     1681 cagtgtcagt aaacaggaga ccatcatgag acatcataca cttcgacagg ctccacagcc
     1741 ccagagtagc ctccagcgtg gtatacccac atctgcccgc tccatgcttt caaactttgc
     1801 acaggcaccc cagttgtctg tgccaggtgg cctccttggc atgccaggtg tcaacattgc
     1861 atacttgaac actggcatcg gaggacataa agccccaagc ttggcagacc ggcagcgtga
     1921 ataccttcta gacatgatcc ctcccaggtc tatatctcag tccatcagtg ggcagaaata
     1981 acgcctgtcc cactcgtgct gccccatcct tgaacccttt ccccatttct cccactgccc
     2041 ccacttccgt cgcatgcagt gcctgtgctg gtgcctacca tacacggaaa gcaaaaccga
     2101 aaaaaaaaac agaagacaga aatagacatc aacaagaaaa cacatgcccc gccctgccac
     2161 ctccccttga tttcacactg ctgcgatctg ttctcctgct gctctgtctt ctctctttga
     2221 tttcctttaa cagtgaggtg ggatctttgc ctctgataga ggtcagaatg aggtcctggg
     2281 gagaatttaa gccctttgat gtgtgtttct aaagtttgtt ttatgctata attattatca
     2341 tttttaatta taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//
