LOCUS       NM_001013881            4510 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus GATA zinc finger domain containing 2A (Gatad2a),
            mRNA.
ACCESSION   NM_001013881 XM_214308
VERSION     NM_001013881.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4510)
  AUTHORS   Basta,J. and Rauchman,M.
  TITLE     The nucleosome remodeling and deacetylase complex in development
            and disease
  JOURNAL   Transl Res 165 (1), 36-47 (2015)
   PUBMED   24880148
  REMARK    Review article
REFERENCE   2  (bases 1 to 4510)
  AUTHORS   Marino,S. and Nusse,R.
  TITLE     Mutants in the mouse NuRD/Mi2 component P66alpha are embryonic
            lethal
  JOURNAL   PLoS One 2 (6), e519 (2007)
   PUBMED   17565372
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4510)
  AUTHORS   Brackertz,M., Boeke,J., Zhang,R. and Renkawitz,R.
  TITLE     Two highly related p66 proteins comprise a new family of potent
            transcriptional repressors interacting with MBD2 and MBD3
  JOURNAL   J Biol Chem 277 (43), 40958-40966 (2002)
   PUBMED   12183469
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474031.2.
            
            [WARNING] On Mar 21, 2025 this sequence was replaced by
            NM_001013881.3.
            
            On Dec 18, 2009 this sequence version replaced NM_001013881.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..4510
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..4510
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /note="GATA zinc finger domain containing 2A"
                     /db_xref="GeneID:290669"
                     /db_xref="RGD:1310596"
     exon            1..437
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            438..539
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            540..797
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     CDS             541..2433
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /note="p66 alpha"
                     /codon_start=1
                     /product="transcriptional repressor p66-alpha"
                     /protein_id="NP_001013903.2"
                     /db_xref="GeneID:290669"
                     /db_xref="RGD:1310596"
                     /translation="MSEEACRTRSQKRAFEPDLTEDDVESKKMKMERGPSELPVDGDS
                     RVMPEPSAGPAQGLLRTTEAMGTGSGEGLLGDGPVDMRTSHSDMKSEKRPPSPDVIVL
                     SDSEQPSSPRVNGLTTVALKDTSTEALLKSSPEERERMIKQLKEELRLEEAKLVLLKK
                     LRQSQIQKEATAQKPTASSGSTVTTPPPLVRGPQNIPAGKPSLQTSSTRIPGSIIPPP
                     LVRGGQQVSAKLGPQASSQVVMPPLVRGAQQIHNIRQHSSTGPPPLLLAPRASVPSMQ
                     IQGQRIIQQGLIRVANVPNTSLLVNIPQPTAASLKGTTVGSAQANSTPSSVASVVASA
                     ESPASRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQN
                     LLETQAGRISATSAAAVLSREPYMCVQCKTDFTCRWREKGGAVMCENCMTSNQKKALK
                     VEHTSRLKAAFVKALQQEQEMEQRLLQQGVGTASIKAETAAPHPSLKQVIKPRRKLAF
                     RSGEARDWNNGSVLQTSSQLSRGSATTPRGVLHTFSQSPKLQNAASATALVSRTGRHS
                     ERVVGTSKGTASNWKKTPLSTGGTLAFVSPSLAVHKSSSAVDRQREYLLDMIPPRSIP
                     QSATWK"
     exon            798..930
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            931..1062
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            1063..1152
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            1153..1284
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            1285..1452
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            1453..1732
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            1733..2034
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            2035..2109
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            2110..2302
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
     exon            2303..4510
                     /gene="Gatad2a"
                     /gene_synonym="RGD1310596"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccccagtggg gtgcggatct tgagcgcccc ggccagactt cattggcttg cgccgccgcc
       61 actcggagag acgtgcctca acccggaagt gtgagaggca aaatctgcct agcaaccggg
      121 gaagccgggc tgtgaagcgg gcaatttcag tgtgagaagg agcggtgaga ccgagcggcg
      181 gctccgagcg cgccgcggca gctccttccg cccggggtca gcgccccggc gcgcgcacgc
      241 gcaccctcgc tgcctgagcg cgccccgcgc cgcccgcgca gtcggtccgt cggtcgtccg
      301 tcgtcctgtc gccgccgccg cctcaggcgc cacccgcggg agccgtcgcc gtgggacgag
      361 accggaccgg acccgagcgc tctgcctgag gctggcccgg ggcccagctg cggatcgcgc
      421 ggagctgagc aacttcggtt ggccagcaca ttgagccagc acatccacat aagttgcctt
      481 ttgacagagc tgtggccatg acggcatggt aggaccagcg tcacggaccc tgaggccaga
      541 atgagtgaag aagcatgccg aacccgcagt cagaagcgag cctttgaacc tgacctaacg
      601 gaggatgatg tggagagcaa gaaaatgaaa atggagagag gaccatcaga actgccggtg
      661 gatggagaca gcagggtgat gccagagccc agtgcaggcc cagcccaggg gttgctgagg
      721 acaacagagg ccatgggcac aggatctggc gaagggctgt taggagacgg gcctgtggac
      781 atgcgtacct cacacagtga catgaagtct gagaagagac ctccctcgcc tgatgtgatt
      841 gtgctctctg acagcgagca gccatcaagc ccgagggtga atggcctgac cacagtggcc
      901 ttgaaagaca ccagcactga ggcgctcttg aaaagcagcc cagaagagcg agaacggatg
      961 atcaagcagc tgaaggagga attgaggcta gaggaagcaa agctggtctt gttgaagaag
     1021 ctgcgacaga gtcaaataca gaaggaagcc actgcccaga agcctacagc ttcctcaggg
     1081 agcactgtga ccacccctcc cccactcgtg cggggtcccc agaacattcc tgctggcaag
     1141 ccatcactcc agacctcctc cactcggata cccggcagca tcatcccacc accactggtc
     1201 cgaggtgggc agcaggtgtc tgccaaactg ggaccacagg ccagctctca agtagtcatg
     1261 ccaccacttg tcaggggagc ccagcagatt cacaacatca gacagcattc ctccacgggg
     1321 ccaccacccc tcctcctggc cccccgtgcc tcagtgccca gcatgcagat tcagggacag
     1381 aggatcatcc agcagggact catccgggtc gccaatgtcc ccaacaccag tctgctcgtc
     1441 aatatccctc agcctacggc agcctcactg aaggggacaa cagttggctc tgctcaggca
     1501 aactccactc ccagcagtgt ggcttctgtg gttgcctctg ctgagtcccc agctagccgg
     1561 caggctgctg ccaagctagc gctgcgcaag cagttggaga agacactgct ggagatcccc
     1621 ccacccaagc cccctgctcc ggagatgaac ttcttgccca gtgctgccaa caatgaattc
     1681 atctatctgg tcggcttgga ggaagtggtg cagaacctgc tggagacgca agcgggcagg
     1741 atttctgcca cctcagctgc tgccgtgtta tcccgggagc cttacatgtg tgtgcagtgt
     1801 aagacagact tcacatgccg ctggcgagag aagggtggag ctgtcatgtg tgagaactgc
     1861 atgacatcca accaaaagaa ggcactaaaa gtggagcaca ccagtcgcct gaaggccgcc
     1921 ttcgtgaagg cgctacaaca agagcaggag atggagcagc gactgctgca gcagggcgta
     1981 ggcaccgcca gcatcaaggc tgagaccgca gctccacatc cctcgctgaa gcaggtcata
     2041 aagccccgac gtaagttggc gttccgctca ggagaggccc gtgactggaa taacgggtcc
     2101 gtactacaga cttccagcca gctgtcccgg ggttcagcca caacacctcg tggtgttctg
     2161 cacactttca gccagtcacc caaactgcag aacgcagcct cagctacggc cctggtaagc
     2221 aggactggca gacattccga gagagtcgtg ggcaccagca agggcaccgc ctccaactgg
     2281 aaaaagacac ctctgagcac aggtgggacg cttgccttcg tcagcccaag cttggcagtg
     2341 cacaagagct cctcggccgt ggaccgacag cgagagtacc tcctggacat gattcctcca
     2401 cgctccatcc cccagtcagc cacatggaaa tagtgggagc cggcccagcc gaggacaggc
     2461 cctctgctct cccgaggccc ttggtctagg acacgcagac taccctccta gcaagttgcc
     2521 tgagacagct caggccttgg ctcttgcctt gctgtggcca ggagagtacc accatggtgc
     2581 ccaggatcag aaccagggac cttccctatg ggccttctcc ttcctttttg cctttagttt
     2641 gcccgacacc agcagaaact cggaccttgg ggccagctct gcctggccag cgtgggtggg
     2701 agctcaccct ggacactgtg acacacccgg gccagactgg caccgggggc tcccgaagtt
     2761 gagccgggat ttcgttttct tttggctttt cccatcttag ctccccagtc tctgcctctt
     2821 catggccatc tataggttga agtttgggtt ttattgggtt ttttgttttt gtttttttta
     2881 taatcacctc ataatgatga tggaattaaa gtgaactgca tagacccagg gtcatggttg
     2941 tgcacagtgc agtctggcag gctctacccc agaggatgct cagagtggca gcagcagaga
     3001 tggcaggtgc caccctggct ctggtcgtgt ttgttgctgc tcactgcagt ccctggcttc
     3061 cacacttagc agaatgaacc gcagcccaga tctgtctgac atccagaggc tccagaggga
     3121 tgctggggtc cgccatgctg gagtcagagc tgactgctgg ctgggaggct gctgggttac
     3181 ttttcgtggt ttattttatt aaaaatttct atcctttttc tcttcatttt gatggacaca
     3241 atctcaagat gcccatgcct gccaagaggc atccaagtag ggcccagcca gaacccttag
     3301 gtctggagtc agcagggctt actccctctt agccacaggg atgtctgaaa gggctgagtc
     3361 tacttttgtt ctgttttgtt tccttctccc tccactctta acaatgggtt ccatggtgaa
     3421 aggcagaagc agctctgtgt ccagcacgca cggtgcggcc ttctgctcat gtgattggtc
     3481 gccgtcgttt ccccatccag ccctggtttc ccttgacaca atacagttag ggactttaat
     3541 ttaaaccctt gttctgcaga ccatcgccct ctgcagacat gcccctgcct cctcctaata
     3601 aaggctcatt taactccgtg atcacttgtg tggaaatcct ccatctttag aaatcatttg
     3661 gacatgtggg cgttctgagt ttttggaaga cccttttgtt gtgtgatacc caagttgctc
     3721 agtacttttg aagtgtgtca cttcccaggg tggatttggg ggaattaaca gaagttgact
     3781 ttttaagggg ggttgttttt acaccaaaaa aaaaaaaaaa tgaaaatata tgcaagcatt
     3841 tcttcagtcc ttgagtattt ttgtgcctgg caagttagtt cctgttatct acacttcctg
     3901 agtggctgag cctctggtca gcaatttagg ctaaagcctt ctggctctgt ggaacagcaa
     3961 cactgggtgg cttccctcag ccagaagtcc tcactcctgt gcagtcactg atgagaccaa
     4021 gtcacctaga actggatgca gacctcccct tgagttgatg gtctgagagc tctattgtcc
     4081 tggtgcattt gtgacctccc tacccctcag tttcccaagt ctaatgactt ctccccatca
     4141 cgacatccac ctgtcatcta acattccgtg ggtcaagttt gtgcacctca caaaggacag
     4201 acctctggct gtgggtcaca ctaaacagga taacaggctg tggtgaaggt ctctgaggag
     4261 ggctggagtg aggtgcctta gcttacttga aagtgctgcc cattcctctg tgccacactg
     4321 gcctaagcag caagccctca agatgatcag tctggggact gggccgggag gaccaggtat
     4381 ttagggtaga aagctgccac ccccactgaa actggctgta gtccctaccc tgagtggtct
     4441 gtgtcctggg cttcttgaaa ctccctagag gtagactggc ctctgcttcc tgagtgctgg
     4501 gattaatggc
//
