LOCUS       NM_199105               3591 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus golgi associated kinase 1B (Gask1b), mRNA.
ACCESSION   NM_199105 XM_227292
VERSION     NM_199105.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3591)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3591)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Nov 27, 2020 this sequence version replaced NM_199105.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061747.1, SRR26643297.7965.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-90                JAXUCZ010000002.1  167345842-167345931
            91-1225             JAXUCZ010000002.1  167347255-167348389
            1226-1440           JAXUCZ010000002.1  167366393-167366607
            1441-1667           JAXUCZ010000002.1  167402822-167403048
            1668-3591           JAXUCZ010000002.1  167408683-167410606
FEATURES             Location/Qualifiers
     source          1..3591
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q33"
     gene            1..3591
                     /gene="Gask1b"
                     /gene_synonym="Ened; Fam198b"
                     /note="golgi associated kinase 1B"
                     /db_xref="GeneID:310540"
                     /db_xref="RGD:735075"
     exon            1..90
                     /gene="Gask1b"
                     /gene_synonym="Ened; Fam198b"
                     /inference="alignment:Splign:2.1.0"
     exon            91..1225
                     /gene="Gask1b"
                     /gene_synonym="Ened; Fam198b"
                     /inference="alignment:Splign:2.1.0"
     CDS             325..1875
                     /gene="Gask1b"
                     /gene_synonym="Ened; Fam198b"
                     /note="protein ENED; expressed in nerve and epithelium
                     during development; protein FAM198B; family with sequence
                     similarity 198, member B"
                     /codon_start=1
                     /product="Golgi-associated kinase 1B"
                     /protein_id="NP_954536.1"
                     /db_xref="GeneID:310540"
                     /db_xref="RGD:735075"
                     /translation="MTCPDKLGQLINWFVCSLCAPRVCKLWSSRRPRTRRNLLLGTAC
                     AIYLGFLVSQVGKGSFQHGQATNRGPPNNQDIFKVPFPEIPLDGTLAPPESQGNGSTL
                     QPNVVYITLRSKRSKPANIRGTVKPKRRKKYAVASVAPDQEVLVRPSLIQPEVARAAD
                     AEVPGYVQGYLTKVGERPWRMLHGPRVRGSNLQQPRAPESNIRIYSESAPSWLSKEDI
                     RRMRLLADGEVASILPTIFEGGTRLLMLEGSTSGSVPGCGPSPCGLLKQPLDMSEVFA
                     FHLDRILGLNRTLPSVSRKLEFIQDGRPRPIILWDSSLVPSSNVSHSSVKITWGTYQQ
                     LLKQKCWLNGRVPRPEWGCTEVHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDAC
                     VQNGLRPNCEDQSSVTLAHIIQRKNDPRHLVFINNKGFFDRSEDNLNFKLLEGIREFP
                     ESAVSVLKSQHLRQKLLQSLFLDQVYWESQGGRQGIEKLIDVIERRARILITYINAHG
                     ARVLPMNE"
     exon            1226..1440
                     /gene="Gask1b"
                     /gene_synonym="Ened; Fam198b"
                     /inference="alignment:Splign:2.1.0"
     exon            1441..1667
                     /gene="Gask1b"
                     /gene_synonym="Ened; Fam198b"
                     /inference="alignment:Splign:2.1.0"
     exon            1668..3591
                     /gene="Gask1b"
                     /gene_synonym="Ened; Fam198b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttcttagtt ttgtctactt ttcctggtcg tttccctcat ccaggactgg tgggagacaa
       61 gtgttagtct gcaaacagcc cagatgtaag agtcagcccc cctttctcct ggagaaggct
      121 gataggagtt taaaaggctt gcggtggtca gtgcacaaag cgttcccaga gcccgcggcg
      181 acccttctct tttacctctg cctgttggag accacttaga tatcgaagcg gactgggcgg
      241 ctggattcag gaagccatga atcatgtcac caggagccag ctgcagactt taaactcagt
      301 tcagcatgtg gaagcggcag agaaatgacc tgtccagaca agctggggca actcataaac
      361 tggtttgtct gctccctgtg cgccccacga gtgtgtaaac tttggagtag ccggcgtccc
      421 aggaccagac ggaacctctt gctgggcact gcctgtgcca tctacctggg ctttctggtg
      481 agccaggtgg gcaaaggctc cttccagcat gggcaggcaa ctaacagggg gccacccaac
      541 aaccaggata tcttcaaggt accctttcca gagatccccc tggatggtac cctggcccct
      601 ccagagtcgc agggcaatgg aagcacattg cagcccaacg tggtgtacat tactctacgt
      661 tccaagcgca gcaagcctgc gaatatccgt ggcacagtga aacctaagcg caggaagaag
      721 tatgcagtgg catctgtagc ccctgatcag gaggtgctgg ttagaccatc ccttatacag
      781 ccggaagttg cacgggcagc agatgctgaa gttcctggct atgttcaggg ttacctgact
      841 aaggttggtg aacgaccctg gaggatgctg catggtccta gagtcagagg ttcaaacttg
      901 cagcagccta gggccccaga gagcaacatt aggatttaca gcgagagcgc cccctcatgg
      961 ctgagcaaag aagacatccg cagaatgcgc ctcctggctg atggtgaggt ggctagcatc
     1021 ctacccacca tctttgaagg tggtacccgc ttgctgatgt tggaaggaag cacctcaggc
     1081 tctgtgcctg gctgcggccc tagcccctgt gggcttctca agcaacctct ggacatgagt
     1141 gaagtgtttg ccttccacct ggacaggatc ctgggtctca acaggaccct gccatctgtg
     1201 agcaggaaat tagagttcat ccaagatggc cggcctcgac ctatcattct ctgggactca
     1261 tctctagtac cttcaagcaa tgttagccat tcttctgtta agatcacctg gggaacttat
     1321 cagcagttgc taaaacagaa gtgctggctg aacggccggg ttcccagacc tgaatggggc
     1381 tgcactgaag tccatcacca cgagtggtcc aagatggctc tctttgattt tttgttacag
     1441 atttataatc gcttggatac caattgctgc ggattcagac ctcgcaagga agacgcctgt
     1501 gtacagaatg gactgaggcc aaactgtgag gaccaaagtt ctgtgacttt agcacacatt
     1561 atccagcgaa agaatgaccc aaggcatttg gtcttcatca acaataaggg cttctttgac
     1621 agaagcgaag acaacttgaa cttcaaattg ttggaaggca tcagagagtt tcctgaatct
     1681 gcagtttctg ttttgaagag tcaacactta aggcagaagc tcctgcagtc tctgttcctt
     1741 gatcaggttt attgggaaag tcaaggaggc aggcaaggga ttgagaagct tatcgatgtc
     1801 atagagcgga gagccagaat ccttatcacc tacatcaacg cacatggagc tagagtatta
     1861 cctatgaacg aatgacaaat ggctttccgc ctcaagggct gtacatgtgt cacacttggt
     1921 ttttctttaa ttaaaggtat caaccttaag tgtttctagg aatgaggcag catagttgaa
     1981 tacatgaaac tgacgcagtt tataccatga actaagttta aaaaagtttg tagagtttaa
     2041 aggtatgcag attcaagaag tttcagaata acatattgca aaatgcctga tgatattttt
     2101 tacttaagac tctgatatgt gtgtcacagt attgtcattg tgcaatgacc caaatgatta
     2161 ttcctactga tgtttaaacc attttgatgt catttgatgg gacagtataa actggctctt
     2221 ctaataaacc attcccatga catttgactg atctgaccag ctgctagcag tgaatttatt
     2281 gacatcctct cattgctgat gggtacaaca gctatcccaa ccctattcag aggcaattct
     2341 ccatcaggaa tttgaggcat gagctctgca cgagcagcag tcctaaaaca acttctaagt
     2401 agacatagaa gtagattcat tacaaatgac aagtatattt tctagagcct cagataatca
     2461 gctacctctg aaaaacaaaa acctctcctc ctatccttcc ctttttaaga agtttattga
     2521 cagcatagaa atgtcataac aatgatgtat taattcaatt ttgctgtctc aattatgacc
     2581 caatttatgc cctgtggtta gaaaactaag gaagtgtaag gcatgttgtt acctgtttga
     2641 aaatttactt gtagagtctc ttactgcttt tattggttgg ttggtttaaa aaaaaagtta
     2701 aggtttcatg tagcccaggc tggctttgaa ctctttgttc atcagtggcc ttctggtctt
     2761 ctgatgctct gtctcccaag tgttgggatt acagacaggt atgtgatgcc atgtcccaga
     2821 gtgcccagta tcacacttgg gtcttcagtc atgttagaga gacactgtat gactatgccc
     2881 ataaacccag accactttta atgaatactt aacaatttgt cattttataa aggatatgct
     2941 gtaatttatg aagtttttct ttgatcacag aagattacat tggtataatt aggtttcatc
     3001 tgatttaatt gatattacct aggtattgat attaaattga taaattgata ttatctaggt
     3061 atcagatatt aaatacacat atagatcagt tcaatacaag aagttgcaat gaaacccaac
     3121 acacatgact ggatcttctc ataaagaaca tatggataga aagcgtattg caacaaatta
     3181 agcaagatta agtctcaatt aattcttccc caaatccctc taccaaattt ttcactgggt
     3241 tgaaagaact gagacacaca aggttcatgc tctgagtctg tctgtcctgg gagactttgc
     3301 caggtcattc cttatcctac ttatatggag cctttgaatc tagagcatat catgtctctc
     3361 tcgatttcaa ctcttctgtg ccttatttga aaggccatga atagccagct acggtgatac
     3421 atagctgaaa tcccagcacc caggaagctg tggaaggatt gtaaatctga ggccagtccg
     3481 gttcatagtg acatcctgtc tgaaatgtgc ccctcccttc atagaagctg atttactgac
     3541 cttttcttct tttggaaact taaaaataaa gcattacaca tttttatcat a
//
