LOCUS       XM_006231916            1980 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Grb2-binding adaptor protein,
            transmembrane (Gapt), transcript variant X1, mRNA.
ACCESSION   XM_006231916
VERSION     XM_006231916.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006231916.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006231916.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1980
                     /gene="Gapt"
                     /note="Grb2-binding adaptor protein, transmembrane;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 ESTs, 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 107 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:686075"
                     /db_xref="RGD:1586621"
     CDS             509..979
                     /gene="Gapt"
                     /codon_start=1
                     /product="protein GAPT isoform X1"
                     /protein_id="XP_006231978.1"
                     /db_xref="GeneID:686075"
                     /db_xref="RGD:1586621"
                     /translation="MLKSFASSPVGVAVGVSLLVLLLACGIGCAWHWNRRETTPLTLP
                     KFMQRRSSRHKDYTKNVGVCAYVTGPSAKASVESKGQKSTAKGSKMHDNYENVEVSPP
                     CTEGETEKGLYENTQPSNFEEHVYGNQTDPLYYNFQKPSPPPQDEDIYILPDCD"
ORIGIN      
        1 cccgaatgaa aagaggaaca attctcagat gaagagagtt tgattaaaaa gtgacagaca
       61 gagctggaca ttctcaggct tcatgtgagt gcaaccgatt taaagtgttt gggtatggga
      121 agaggtttct ggatggcacc tcctttttct tgaggtttct actgtgctgt taatctctgc
      181 tcacatgagc ttgcttcact ttgtgatcct ccaagggaaa aggaagtgaa gaggaatgaa
      241 agtaccccct tctccccgat tcagctccag agtacaagga tggtgataca gtaaatggtc
      301 accttcagag actgactttg ttcagtctaa cgtccagttg catcaggact tagctagtaa
      361 tgtcatctaa gatgtggaaa agaaatgact gacggagcct tccagttagg tttttgaacc
      421 gcaaccacaa caggctacca gagactgcct ctgcttgtgc ttgtgaattg gttaaccaca
      481 ccaagcttct gaacaacact gagctgaaat gctgaaaagc tttgcgagtt ctccggtggg
      541 tgtggctgtc ggcgtttccc tcctagtact tttgctggcc tgtggaattg gatgtgcttg
      601 gcactggaat cgccgggaaa ccacaccact taccttaccg aaatttatgc aaagaagaag
      661 cagcaggcat aaagactaca cgaaaaacgt cggcgtgtgt gcctacgtga ctggcccaag
      721 cgctaaagcc tcagtggaaa gcaaaggcca gaaatctact gccaagggaa gtaagatgca
      781 tgataactac gaaaatgtgg aagtaagtcc tccctgcact gaaggggaga ctgagaaggg
      841 cttgtatgaa aacacgcagc cttctaattt tgaggaacat gtctacggga atcagaccga
      901 ccccctctat tataacttcc agaaacctag tcctcctcct caagatgaag acatatacat
      961 ccttccagat tgcgactaga tgttcaacaa actgagactc atggctggag gaaaatccat
     1021 catgaggcct ccgggtggac tgaagtcatc atgatcaaat tattctgatg aaatcagtgg
     1081 tctttttcct atcaccaccc ttataaatcc tcactaagag aaccattgta gacaagttct
     1141 agaaactgcg ccccctccac gcgtgccctg ccttcaatta aatctgtgct gtattatgtt
     1201 catttttctt tttgaatatt tcctgtaacg actttccttc cttccttcct ctaccacctc
     1261 tgaggttcgg cattattgca atctcctggc aggtcgtcct tctcctgtcc tgaggggcta
     1321 acccaaggcc tttgacatgt tagataagtg ctcaactgct gagccacacc tctagcctga
     1381 tcttctgaga tactgccaat caatagccta tggcccaata ggtggatctt cagaaaacat
     1441 tctaggtggt catgtcatta ctttgcaaaa aaaaaaaaaa ataattttga tgttgtttgc
     1501 aaaagatgta aaactcgaaa ccctaactcc agaattcatg actttttcag ttacaactgc
     1561 ctttgtcagt taattcccct aacccctccc ttctttactt gcatcagaga catctcaaag
     1621 ctcccaagtc cctctctcaa ctccacagta tgacttgtct gcctctaaag cctgcctcat
     1681 atcataattt cttccaacac cccccatttc aaacctacat ttactttttt agatcttgct
     1741 gcctgatcaa ttctttgagc atttaaaaat atgaatgttt gctgtacatt ttattactaa
     1801 tgtaatatga ggatatcttc agttgcagtt aaacggaaat gaactggttc ctagtaatac
     1861 ttttagaccc aaagacatca tatgaggaaa taaagtttgg ttaattgaaa aagatgtgaa
     1921 tcttgcagtt tgtcatgtag ttttgagaaa aaacaaataa atttactaat tctaaatcta
//
