LOCUS       NM_001025148            1568 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus polypeptide
            N-acetylgalactosaminyltransferase-like 5 (Galntl5), mRNA.
ACCESSION   NM_001025148 XM_575320
VERSION     NM_001025148.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Takasaki N, Tachibana K, Ogasawara S, Matsuzaki H, Hagiuda J,
            Ishikawa H, Mochida K, Inoue K, Ogonuki N, Ogura A, Noce T, Ito C,
            Toshimori K and Narimatsu H.
  TITLE     A heterozygous mutation of GALNTL5 affects male infertility with
            impairment of sperm motility
  JOURNAL   Proc Natl Acad Sci U S A 111 (3), 1120-1125 (2014)
   PUBMED   24398516
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC078995.1.
            
            On Jul 1, 2005 this sequence version replaced XM_575320.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078995.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q11"
     gene            1..1568
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /note="polypeptide N-acetylgalactosaminyltransferase-like
                     5"
                     /db_xref="GeneID:499968"
                     /db_xref="RGD:1565271"
     exon            1..91
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /inference="alignment:Splign:2.1.0"
     exon            92..330
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /inference="alignment:Splign:2.1.0"
     CDS             123..1454
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /note="UDP-N-acetyl-alpha-D-galactosamine:polypeptide
                     N-acetylgalactosaminyltransferase-like 5"
                     /codon_start=1
                     /product="inactive polypeptide
                     N-acetylgalactosaminyltransferase-like protein 5"
                     /protein_id="NP_001020319.1"
                     /db_xref="GeneID:499968"
                     /db_xref="RGD:1565271"
                     /translation="MKNIIIQCLICGFLAIGLWMAMLLLFLHLEQEDMLDKETEKLLY
                     NRSFGKNVYQQASHSKKILKGDIINDRAMFSDPELIQGLSRYGLNVITSRRLGIERQV
                     PDSRNKICQQKHYPFNLPTASVIICFYNEEFNTLLRTVSSVMNLSPKHLLEEIILVDD
                     MSEFDDLKAKLDYHLEIFRGKIKLVRNKKREGLIRSRMIGASRASGDILVFLDSHCEV
                     NRVWLEPLLHAIAKDHKMVVCPVIDVIDELTLDYVGSPIVRGAFDWNLNFRWDDVFSY
                     ELDGPEGPSTPIRSPAMSGGIFAINRHYFNELGQYDKDMDLWGGENVELSLRIWMCGG
                     QLFILPCSRVGHNNKALSKNRLVNQSALSKNLLRVVHVWLDEYKENFFLQRPSLTHVS
                     CGNISDRVELRKRLGCKSFQWYLDNIFPELEPLNRGKGTKPFLLAKGKNVP"
     exon            331..448
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /inference="alignment:Splign:2.1.0"
     exon            449..615
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /inference="alignment:Splign:2.1.0"
     exon            616..738
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /inference="alignment:Splign:2.1.0"
     exon            739..988
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /inference="alignment:Splign:2.1.0"
     exon            989..1106
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /inference="alignment:Splign:2.1.0"
     exon            1107..1256
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /inference="alignment:Splign:2.1.0"
     exon            1257..1539
                     /gene="Galntl5"
                     /gene_synonym="Galnt15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 catcttttca ccattcacag gcctgatttc acgtatgact ctggttgtca aacaactctc
       61 aaagctgccc gagtggcaac cccactgaca ggaaattgga atttaaaaat gtgaaatcaa
      121 caatgaaaaa tatcataatt cagtgtttaa tctgtggatt cctggccatc gggctctgga
      181 tggctatgtt acttttgttt ttgcaccttg aacaagagga catgctggat aaagaaactg
      241 agaaactcct atacaatagg tcatttggaa aaaatgtgta ccagcaagcc agccactcaa
      301 agaaaattct caaaggggac atcattaatg acagggctat gttttcggat ccagagctta
      361 tccaaggact gagtcgatat ggattaaatg tcattaccag tagaagactg ggcatcgaga
      421 gacaggtgcc agactccagg aacaaaatat gtcagcagaa acactaccca tttaatctac
      481 ccactgccag cgtcatcata tgcttttata acgaggaatt taacaccctg ctccgaacag
      541 tgtcaagtgt gatgaacctc agcccgaagc atctcctgga ggagataatt ctggtggatg
      601 acatgagtga atttgatgat ttgaaagcca agctggacta tcatctggaa atttttcgtg
      661 ggaaaattaa attagtaaga aacaaaaaga gagagggtct catcagatca agaatgatcg
      721 gtgcctcccg tgcttcagga gacattctgg tgttcttgga tagccactgt gaggtgaata
      781 gagtctggct ggagcccttg ctgcatgcca ttgccaagga ccacaaaatg gtggtgtgcc
      841 ctgttatcga tgtcatcgat gagttaacct tggactatgt cgggtcacct attgtaaggg
      901 gagcttttga ctggaatcta aatttcagat gggacgatgt tttctcatat gagctggatg
      961 gcccagaagg accaagtaca cctatccggt cgcctgcaat gtcaggagga atctttgcta
     1021 taaacagaca ttattttaat gaacttggac agtatgacaa ggacatggat ctttggggag
     1081 gagaaaatgt agaactttcg ctaagaattt ggatgtgtgg aggccagctc ttcatactcc
     1141 cttgctctcg ggttggacat aacaataagg cactgagtaa aaacagactt gtaaaccaga
     1201 gtgccttgtc aaagaattta cttcgagtgg ttcacgtctg gctggatgaa tacaaggaaa
     1261 acttttttct tcaaagacct tctttgacac acgtatcctg tggaaatatt agtgaccgtg
     1321 ttgaattaag gaaacgactg ggttgcaaat ccttccagtg gtatttggat aatatctttc
     1381 cagagttgga gccactcaac cgaggaaaag gaacaaaacc atttttgtta gcaaagggta
     1441 aaaatgtccc ctgattcctc aacatattca taccacagga caaatttgga acatcataca
     1501 attatgtaaa atgcaatgaa aaatacagag tggccaatca aaaaaaaaaa aaaaaaaaaa
     1561 aaaaaaaa
//
