LOCUS       NM_001025053            2560 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus polypeptide N-acetylgalactosaminyltransferase 4
            (Galnt4), mRNA.
ACCESSION   NM_001025053 XM_576216
VERSION     NM_001025053.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   de Las Rivas M, Lira-Navarrete E, Daniel EJP, Companon I, Coelho H,
            Diniz A, Jimenez-Barbero J, Peregrina JM, Clausen H, Corzana F,
            Marcelo F, Jimenez-Oses G, Gerken TA and Hurtado-Guerrero R.
  TITLE     The interdomain flexible linker of the polypeptide GalNAc
            transferases dictates their long-range glycosylation preferences
  JOURNAL   Nat Commun 8 (1), 1959 (2017)
   PUBMED   29208955
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Gonzalez-Begne M, Lu B, Han X, Hagen FK, Hand AR, Melvin JE and
            Yates JR.
  TITLE     Proteomic analysis of human parotid gland exosomes by
            multidimensional protein identification technology (MudPIT)
  JOURNAL   J Proteome Res 8 (3), 1304-1314 (2009)
   PUBMED   19199708
REFERENCE   3  (bases 1 to 2560)
  AUTHORS   Argueso P, Tisdale A, Mandel U, Letko E, Foster CS and Gipson IK.
  TITLE     The cell-layer- and cell-type-specific distribution of
            GalNAc-transferases in the ocular surface epithelia is altered
            during keratinization
  JOURNAL   Invest Ophthalmol Vis Sci 44 (1), 86-92 (2003)
   PUBMED   12506059
REFERENCE   4  (bases 1 to 2560)
  AUTHORS   Bennett EP, Hassan H, Mandel U, Mirgorodskaya E, Roepstorff P,
            Burchell J, Taylor-Papadimitriou J, Hollingsworth MA, Merkx G, van
            Kessel AG, Eiberg H, Steffensen R and Clausen H.
  TITLE     Cloning of a human UDP-N-acetyl-alpha-D-Galactosamine:polypeptide
            N-acetylgalactosaminyltransferase that complements other
            GalNAc-transferases in complete O-glycosylation of the MUC1 tandem
            repeat
  JOURNAL   J Biol Chem 273 (46), 30472-30481 (1998)
   PUBMED   9804815
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC105818.1.
            
            On Oct 16, 2005 this sequence version replaced NM_001025053.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC105818.1, AB040675.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q13"
     gene            1..2560
                     /gene="Galnt4"
                     /note="polypeptide N-acetylgalactosaminyltransferase 4"
                     /db_xref="GeneID:500826"
                     /db_xref="RGD:1564589"
     exon            1..2542
                     /gene="Galnt4"
                     /inference="alignment:Splign:2.1.0"
     CDS             247..1983
                     /gene="Galnt4"
                     /EC_number="2.4.1.41"
                     /note="polypeptide GalNAc transferase-T4;
                     UDP-N-acetyl-alpha-D-galactosamine:polypeptide
                     N-acetylgalactosaminyltransferase 4 (GalNAc-T4)"
                     /codon_start=1
                     /product="polypeptide N-acetylgalactosaminyltransferase 4"
                     /protein_id="NP_001020224.2"
                     /db_xref="GeneID:500826"
                     /db_xref="RGD:1564589"
                     /translation="MAVRWTWAGKSCLLLALLTLAYILVEFSVSTLYASSGADRAREL
                     GPRRLSDHETREEDLSQPLYKKPPADSHALGEWGRASKLQLDEGELKQQEELIERYAI
                     NIYLSDRISLHRHIEDKRMYECKAKKFHYRSLPTTSVIIAFYNEAWSTLLRTIHSVLE
                     TSPAVLLKEIILVDDLSDRIYLKAQLEAYISNLDRVRLIRTNKREGLVRARLIGATFA
                     TGDVLTFLDCHCECNTGWLEPLLERISRDETAIVCPVIDTIDWNTFEFYMQTGEPMIG
                     GFDWRLTFQWHSVPKHERDRRTSRIDPIRSPTMAGGLFAVSKKYFQYLGTYDTGMEVW
                     GGENLELSFRVWQCGGKLEIHPCSHVGHVFPKRAPYARPNFLQNTARAAEVWMDDYKE
                     HFYNRNPPARKETYGDISERKLLRERLQCKSFDWYLKNVFSNLHVPEDRPGWHGAIRS
                     MGISSECLDYNAPDNNPTGANLSLFGCHGQGGNQFFEYTSNKEIRFNSVTELCAEVPQ
                     QKDYVGMQNCPKDGLPIPVNIIWHFKEDGTIFHPHTRLCLSAYRTADGRPSVQMKTCD
                     ALDKNQIWRFEK"
ORIGIN      
        1 aagttctgag aagagcagga ggaagtgggc accagttgtg ctgcaccaga ggccggggag
       61 cgaggggtct caagtgaccc ctgggaaact ccggtgtcag gaaggagccg agcgcctaca
      121 tgaaaggagg gaccttctcg gaagttcgcc cctacctgag ccgggaactc cagcttcagg
      181 atccgctgca ctccccccgc gtgctggctc ggtggccgcg tctacacacg acctctgagg
      241 ttccggatgg ccgtgaggtg gacatgggca ggcaaaagct gcctgctgct ggcgctttta
      301 acactggctt atattctggt ggagttctcg gtctctactt tgtatgcctc ctcgggagct
      361 gaccgtgcca gggagctggg gccaaggaga ctctcagatc atgagacaag ggaagaggat
      421 ttgtctcagc ctctttataa aaagccccct gcagattccc atgctcttgg ggaatggggg
      481 agagcaagca aactccagct cgatgagggt gaactgaagc agcaagaaga actcattgag
      541 agatacgcca tcaacattta cctcagtgac aggatctccc tgcaccgcca catagaggat
      601 aaaagaatgt atgagtgtaa agccaagaag ttccactaca ggtcgctccc caccacctcc
      661 gttatcatcg ccttttataa tgaagcctgg tccactctgc ttcgaaccat tcacagtgtt
      721 ctagaaactt ctccagctgt gcttttaaag gagatcatct tggtggatga cttaagtgac
      781 agaatttatc tgaaggctca acttgaagct tatatcagca acctcgatag agttcgcttg
      841 attagaacca ataagagaga ggggctggtc cgggcccgtc tgattggggc cacttttgcc
      901 accggggatg tcctcacttt cctggattgt cactgtgagt gtaacactgg ttggttggaa
      961 ccgcttttgg aaaggatcag tagagatgaa acagcaattg tatgtcctgt catcgacacc
     1021 atcgactgga atactttcga attctatatg cagaccgggg agcccatgat tggtggtttt
     1081 gactggcgtt tgaccttcca gtggcattct gtccccaaac atgaaaggga caggcggaca
     1141 tcaagaattg accccatcag gtcacccacc atggcaggag gcctgtttgc tgtcagcaag
     1201 aagtattttc agtacctggg aacgtatgac actggcatgg aagtctgggg aggtgaaaac
     1261 cttgagctgt ctttcagggt ttggcagtgc ggcggcaagc tggagatcca cccatgttct
     1321 cacgtgggcc acgtgtttcc caagcgggcg ccctacgctc gccccaactt cctacagaac
     1381 accgctaggg cggcggaagt gtggatggat gactacaaag agcatttcta taaccggaac
     1441 cctcccgctc gaaaagagac ctatggcgat atttcggaaa ggaagttact gagggaacgg
     1501 ctgcaatgta agagcttcga ctggtatttg aaaaatgtgt tctctaactt acacgttccg
     1561 gaggatagac ctggctggca cggagccatc cgcagtatgg gcatctcttc agagtgctta
     1621 gattataatg caccggacaa caaccctacg ggtgctaacc tttcgctgtt tggatgccac
     1681 ggtcaagggg gcaatcagtt ctttgaatat acttcaaaca aggaaatcag atttaattcc
     1741 gtgacggaat tatgtgcaga ggtcccccaa caaaaggatt atgtagggat gcaaaactgc
     1801 cccaaagatg ggctccccat tccagttaac atcatttggc attttaaaga agacgggacg
     1861 atttttcacc ctcacacaag actgtgtctt agtgcttacc ggacagccga cggccgacct
     1921 agcgtacaga tgaaaacttg tgatgccctt gataaaaacc agatctggag gttcgagaaa
     1981 tagacaagca gaacagcttt ctggggctga ctgtagcctc tggaaagtaa ccctgcccag
     2041 tgatgattgt acttttacca gaagtcacct ggcagctgtc tgtaagaaca ctggaaagcc
     2101 atggttcatc tggggatatc tctctgaagc tgggtacaca gagcactgct gctcaatatc
     2161 tcaaagtgcc ttctttgctc tcgggtttta tttaaaagct ttgtcgatat ggtcttctgc
     2221 aactccttaa ggaaagccgc tgtgaactga gatgcacaga acacttaagt gtgggctaag
     2281 ggtggagctt agcagtagaa tgcttagcta acacgtgtaa gaccctgagt cccacccact
     2341 gcaccacaaa atacgtgcaa ggcttaatat ttagaacata agagtccagg caacatgggg
     2401 tgagattcgt tctgattggt aaattcattg catgaacttt tctttttttt ttttaatcaa
     2461 aacatgtgaa tgtgtaatta gagctattac tttttgatta taccctttta gtaagcatat
     2521 taaattttag gtttctaaaa aaaaaaaaaa aaaaaaaaaa
//
