LOCUS       XM_039084313            2522 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus galactose-3-O-sulfotransferase 2
            (Gal3st2), mRNA.
ACCESSION   XM_039084313
VERSION     XM_039084313.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2522
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2522
                     /gene="Gal3st2"
                     /note="galactose-3-O-sulfotransferase 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 3 Proteins, and 93% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:685402"
                     /db_xref="RGD:1593854"
     CDS             1..1206
                     /gene="Gal3st2"
                     /codon_start=1
                     /product="galactose-3-O-sulfotransferase 2"
                     /protein_id="XP_038940241.1"
                     /db_xref="GeneID:685402"
                     /db_xref="RGD:1593854"
                     /translation="MVLPAADRFCNRVTSFQVLLLFLVLAVLLLVGFLRVDFRLLTPD
                     KAQEPPVTNIMFLKTHKTASSTILNILYRFSESHNLSTALPEGSRVHLGYPWLFVTRY
                     VEGLKQDGRLQHHFNIMCNHLRFNFGEVQKVMPKDTFYFSILRNPVFQLESSFIYYKN
                     YAPAFQRAKSLNEFLADPWRYYNDSVDLKNVYAKNNMWFDFGFDNNAPADVDYVRKCL
                     AKVEQRFHLVLIADYFDESMVLLRRRLRWQLDDIASFKLNVRSQSTISHLTPESQERV
                     KHWCALDWHLYEHFNRTFWAQLHAELSPRQLTEELEQLRAKQRELTTLCLQDPESKNV
                     THIDDLNLRPYQSGKAKILGYNLRHGLDNTTLRICQRMAMPELQHMAHLYSLQFPNKT
                     PKDISFLKE"
ORIGIN      
        1 atggttttgc ccgctgcaga ccgtttctgc aatcgtgtga cgtccttcca ggtgctactc
       61 ttgttcctgg tgctggctgt gctcctgttg gttggttttc tgcgtgtgga tttcagactg
      121 cttacaccgg acaaggccca ggaaccgcca gtcaccaaca tcatgttcct caagacgcac
      181 aagacggcca gcagtacaat actcaacatc ctctaccgct tttccgagtc tcacaaccta
      241 tccacggcgt tgcccgaggg ttccagagtc cacctgggct acccctggct ttttgtgacc
      301 cggtatgtag agggcctgaa gcaggacggt cgcctgcaac accatttcaa catcatgtgc
      361 aaccaccttc ggttcaactt cggtgaggtg cagaaagtca tgcccaaaga cactttctac
      421 ttctccatcc tccggaaccc ggttttccag ttggagtctt ccttcatcta ctataagaac
      481 tatgcacctg ccttccagag agccaagagc ctgaatgaat tcctggcaga cccgtggagg
      541 tactacaatg acagtgtgga cctgaaaaat gtctatgcaa agaacaacat gtggtttgat
      601 ttcggctttg acaacaacgc cccagctgac gtggactatg ttcgcaagtg ccttgcaaag
      661 gtggagcagc gattccatct ggtgctcatc gcagactact ttgacgagtc tatggtgttg
      721 ctgcgcagga ggctgcgctg gcagctggat gacatcgcgt ccttcaagct gaacgtgcgc
      781 agccagagta ccatctctca cctgacgccc gagagccagg agcgtgtcaa acactggtgc
      841 gcgctggact ggcacctcta cgagcatttc aaccgcacct tttgggctca gctgcatgca
      901 gagctgagcc cacggcagct cacagaagag ctagagcaac tgcgggcgaa gcagcgtgag
      961 ctcaccaccc tgtgtcttca ggatcccgag tccaagaacg tgactcacat agatgacctg
     1021 aacctgcgcc cttaccagag cggaaaggct aagattctgg gctacaacct taggcatggt
     1081 ctggacaaca ctacactgcg tatctgtcag aggatggcga tgccggagct ccagcacatg
     1141 gcccatttgt actcgctgca gtttcccaac aagacaccca aggacatctc gttcctgaaa
     1201 gagtaggggt tcggctaagt gaccctttct cccgcgtctg cctctccgaa gtgaagaacg
     1261 aggagaaact gtgacgagac ccacccacct ccagcttcga ggagagggcc ttacacctaa
     1321 gacatcaggc acagccgttc catagctgaa tccagccgtt gtagagacat gtcctggaca
     1381 ggcacgaatg ctagagccct taaattatct gttcgtagag ccagactaag cagctattca
     1441 gctacgggag caccagagct taggtagtga gcccgtgaat ccaggaagag acccagaagc
     1501 gttccctggg gttttctagc cacatgaatt cagcactggt gacatcgcca cgcctgtgta
     1561 gcgcgcagag gcagtagttt agaggtggga ctgggagagg caaccttcca ttttatgaag
     1621 aacggggcag actgaggttg ttggttaacc tgagcacagg ctttgtagct tcctgctgaa
     1681 ggaattgaag gaaggaggaa gtgcctgact tgccagaggt gctcagcggg atacctttgg
     1741 ttgccttgga aaccatattg tatatactct cagggatcac cttttgggtg cctctcttag
     1801 tcattcatgg agagagacta agtacctagc acccagctct ggcaggataa ggtacctggt
     1861 tacctggggt acctaaatca ggatgcccga ggtgttggga aagaagccac tgtcacatat
     1921 tcggcctaga gtttcggcct gagccttgct ggcagagttt gggtggagtt ttttcttctg
     1981 tgtctgtcgg cccagctctg ggcaagacag cccatgtgcc tttggacatc aaacatttta
     2041 agaaaagtaa ttgtcaaaaa aaaaaaaaaa aagagtaatt gcgggtgagt ttagagatgg
     2101 tacaatgagt ttgtcaatct aaaaggacat tgtaaattga aaattgactc tcccaaacta
     2161 aacagagata gtaaaaaaaa tgccaggtac gctggctcag acctttaatc ctaacactgg
     2221 ggaggcagaa gcaaacagat ttctgagttt gaggccagcc tggactacct agtgagttcc
     2281 aggatagcca ggctacaaag caagatcctg tctcaaaaca aaagagaaag ctaccaacaa
     2341 acaaactaac taaaacccca accaaacaaa aatccaaacc actgaactta agacaaatta
     2401 ctcttaataa cgtgggtcca ctggaagaga agtgagagaa gaccccaaag actaagcata
     2461 aaggagattt atgtgcccta gaggggacag aggatttgga taacagacca aggcaggaga
     2521 ta
//
