LOCUS       XM_008766660            3878 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glutamate decarboxylase-like 1
            (Gadl1), transcript variant X1, mRNA.
ACCESSION   XM_008766660
VERSION     XM_008766660.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008766660.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008766660.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3878
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3878
                     /gene="Gadl1"
                     /note="glutamate decarboxylase-like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 11 ESTs, 3 long SRA reads, 11 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 11 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:367181"
                     /db_xref="RGD:1565145"
     CDS             281..2083
                     /gene="Gadl1"
                     /codon_start=1
                     /product="acidic amino acid decarboxylase GADL1 isoform
                     X1"
                     /protein_id="XP_008764882.3"
                     /db_xref="GeneID:367181"
                     /db_xref="RGD:1565145"
                     /translation="MTRPWHLLPTFQTGRRDAGPGSNCVFLESPRLPQEAGTAAWVAQ
                     QSSGGLVLVPSCLCLHLCDPERSTAAAPAEKPGATMSHACDRQDASQGDTDQKEMTPG
                     KKIPVFVDGVVLNGPQTDVKAGEKFVEEACRLIMEEVVLKATDINEKVCEWQPPEQLR
                     QLLDLEMRDTGESQDKLLKLCQDVIRYSVKTNHPRFFNQLYAGLDYHSLAARIITEAL
                     NPSIYTYEVSPVFLLVEEAVLKKMIECVGWKEGDGIFNPGGSVSNMCAMNLARYRHCP
                     DIKDKGLSGLPRLILFTSAECHYSMKKAASFLGIGTQNVYFVETDGRGKMIPEELEKQ
                     IWQGKQEGAVPFLVCATSGTTVLGAFDPLDEIAEVCERHGLWLHVDASWGGSALVSRK
                     HRRLLHGIHRADSVAWNPHKMLMAGIQCSALLVKDKSDLLKKCYSAKATYLFQQDKFY
                     DVSYDTGDKSIQCSRRPDAFKFWMTWKAVGTSGLEERVNRAFALSRYLVDEIKKREGF
                     KLLIEPEYTNVCFWYIPPSLREMAEGPEFWRKLSLVAPAIKEKMMKKGSLMLGYQPHR
                     GKVNFFRQVVISPQVSREDMDFLLDEIDSLGRDM"
ORIGIN      
        1 ctgcaagaag agctcttgct atactccctc ggtggaaggc tgaggcagga agtttgctga
       61 gagatcacgg ccagcctgag ttacatagtg agttctaggg ctgagtcaga ctgactcaaa
      121 agcaaacaaa caaacaaaca aacacacaaa caaacaaaca taggggagtg gggatgggga
      181 gacgaaataa aaagagcagg tggattgtgg gagggtcact aggacctgcc ttgtgcccct
      241 accttcccct gggactgttg ggcttcttct gcctgtccca atgacacgcc cctggcacct
      301 actccccacc ttccagacag ggcggaggga cgctggccct ggctcaaact gtgtcttctt
      361 agagagcccc aggctgcctc aagaggcggg cactgcagcc tgggtggcac agcagagcag
      421 tggcgggctt gtcctggtcc ctagctgtct ctgcctgcac ctgtgcgatc cagaacgctc
      481 caccgccgca gccccagcag agaagcccgg agccacgatg agccacgcct gcgaccgcca
      541 ggatgccagc caaggagaca ctgaccagaa ggagatgacc cctggtaaga agatccctgt
      601 cttcgtggat ggggttgtac ttaatggacc acaaacagat gtgaaagctg gagaaaaatt
      661 tgttgaagaa gcctgtaggc taataatgga agaggtggtt ttgaaagcta cggacatcaa
      721 tgaaaaggta tgtgagtggc agccccctga gcagctgagg cagctccttg acctggagat
      781 gagggacacg ggagagtcac aggacaagct gctgaaactc tgccaagatg tcatccgcta
      841 cagtgtcaaa accaaccatc cgagattttt caaccagctg tatgcgggcc ttgactatca
      901 ctccttggct gcccggatta taacagaggc actgaaccca agcatttata cgtatgaggt
      961 gtccccagtg tttctgttag tggaagaggc ggttctgaag aaaatgattg aatgtgttgg
     1021 ctggaaagaa ggggatggaa tatttaaccc aggtggctca gtctccaata tgtgtgcaat
     1081 gaatttagcc agatacagac attgccctga tatcaaggac aaaggcctgt ctggtttgcc
     1141 aagattaatc cttttcacgt cggcagagtg tcattactcc atgaagaaag cggcctcctt
     1201 ccttgggatt ggcacccaga atgtgtactt tgtagaaacg gatggaagag gtaaaatgat
     1261 accagaggag ctggagaaac aaatctggca agggaaacaa gagggggcag tgccgtttct
     1321 cgtctgtgcc acctctggta ccaccgtgct gggcgccttt gaccccctgg atgagattgc
     1381 tgaggtctgt gagaggcatg gcctctggct ccatgtggat gcctcttggg gcggctcggc
     1441 tttggtgtcc aggaagcacc gccggctcct gcatggcatc cacagggctg actcggtggc
     1501 ctggaaccca cacaagatgc tgatggcggg aatccagtgc tccgctctac ttgtcaagga
     1561 caaatctgat cttcttaaga agtgctactc tgccaaagcg acatatctgt tccagcagga
     1621 taaattctac gacgtcagct acgacacggg agacaagtcc atccagtgta gcaggagacc
     1681 tgatgccttc aagttctgga tgacctggaa ggctgtgggc acatcaggac ttgaggagag
     1741 agttaatcgt gcctttgctc tatctcggta cctggtcgac gaaatcaaga aaagagaagg
     1801 cttcaagctg ctgatagaac ctgaatatac caatgtgtgc ttttggtaca ttccaccaag
     1861 tctccgagag atggcggaag gaccggagtt ctggagaaag ctcagcttgg tggccccagc
     1921 cattaaggag aaaatgatga aaaaggggag tctcatgctg ggctaccagc cccaccgggg
     1981 gaaagtcaac ttcttccgcc aggtggtcat cagccctcaa gtgagccggg aagacatgga
     2041 cttcctgctg gatgagatag acagcctggg tagagacatg tagccacggc tttcatcccc
     2101 cagaggcatc actcctgtcc tggggacggt cacggatcca gtgcatctga agactcacta
     2161 gacagatgac ggtcctggtg agattaggaa acacgcccgc tccccacaca gaaaacgcta
     2221 agcaaatagt cctaagggtt ctttggctgc ctgctgctac tgcttgtaga acggagaaag
     2281 tagacattat aaagaattat tctctcaaat atcatccttt gaaacaaccc cgaggacact
     2341 ttaggcagtg ccactcggat ggatgctggt ttgtaagctc ccattgctct ctaaagaaca
     2401 cagaagcgca atgtggagct tacagcagtg aaccccagtg tgcccctgtg ccaccagcat
     2461 cagcaccgtc agggacttac taaaaataca aattctccag ccttacccca caccacctga
     2521 atcagaaact ctggctggtt ccagcatcct gaggtttaat aagcccaaca ggtgagtctg
     2581 atgcacaata aattctgaga gacaatggtc cagtgaaaag cctttacagc tgttttaccc
     2641 cctaaaggac atgtgatatt tcagtagcct ctcagccagt ctttgaaaaa tacagaccac
     2701 atccccacac ctcgctagct agctatatgc tagaaatggt ttctcttaac acttaaaaag
     2761 tggaaaagaa tgtacagcaa atgtgggctt gttgagtcat ttttctagta ggtaatcatg
     2821 ggaaactcaa tagccatagt tcaggtccca ttctgccttt agtgagacag ggcagcttct
     2881 cgactgatgg aaaataccac tgaggtcaga tagtttgcaa tcccattata tttttttgaa
     2941 atattcaaat atatatatat atatatgtat atatatatat gcaagagagg gagagataga
     3001 tagatagact atattagatt cttacagcct aaagatacat gttttatttg ggctgaagtg
     3061 tttttgggtt tcgtttttgt ttcaggagtt acaatgaatc actattctaa ttcatctgca
     3121 ttataaatta ggggaagaaa accaaacagt tttgatcaat gattagaaaa cattaatcca
     3181 cttctccaag catgctattg ggtggggaca aacattgcaa ggctgtgtgg gtctctgtcc
     3241 ctcttttaca ttttggaatg cacttcttat tttcactctc ggctttgtag ggaataaaat
     3301 aaattccaga agtgaagtcc aaggttgtac aacatcctcc ttctcaaatt ctgcaatgtc
     3361 agttagagtt ttcagtggtc tatcttgagc agagactcta gatttagaga cctctccgtg
     3421 gaggtcccct gttgttcctg caacgtggat gactgcaact ctctctggaa cccacacctt
     3481 agatttattt ctgggggttt tcttgactag gaacagacaa tctggagacg acgtgtacat
     3541 gaaggctatg tgttgagatt tgtccaggtg gggggcttgc aatcgcctga cgatggatca
     3601 ctaactcctg acatttaaat tttgagaaat ggatgtgtac tgtgtagtct gcaccaaaca
     3661 tcttcattgt agactgtgca gcctttcact gtctccactc agcaaaggta ttttcacttc
     3721 atttcctgaa ttacttcaaa ctccctggtg gtgggagcta tcgtgcatga gttgactctc
     3781 gttgcctttt caaaattgtt ctacatagag tgctcctaag actgatgctt gaaataagtt
     3841 ggattccatg aaataaagat ctctgtcagc actgtgca
//
