LOCUS       NM_138897               1861 bp    mRNA    linear   ROD 16-JUN-2024
DEFINITION  Rattus norvegicus gamma-aminobutyric acid type A receptor subunit
            rho3 (Gabrr3), mRNA.
ACCESSION   NM_138897
VERSION     NM_138897.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Mejia,C., Garcia-Alcocer,G., Berumen,L.C., Rosas-Arellano,A.,
            Miledi,R. and Martinez-Torres,A.
  TITLE     Expression of GABArho subunits during rat cerebellum development
  JOURNAL   Neurosci Lett 432 (1), 1-6 (2008)
   PUBMED   18201822
  REMARK    GeneRIF: The expression of GABA(C) receptors in the cerebellum adds
            a new dimension to the regulation of GABAergic neurotransmission
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Croci,C., Brandstatter,J.H. and Enz,R.
  TITLE     ZIP3, a new splice variant of the PKC-zeta-interacting protein
            family, binds to GABAC receptors, PKC-zeta, and Kv beta 2
  JOURNAL   J Biol Chem 278 (8), 6128-6135 (2003)
   PUBMED   12431995
REFERENCE   3  (bases 1 to 1861)
  AUTHORS   Vien,J., Duke,R.K., Mewett,K.N., Johnston,G.A., Shingai,R. and
            Chebib,M.
  TITLE     trans-4-Amino-2-methylbut-2-enoic acid (2-MeTACA) and
            (+/-)-trans-2-aminomethylcyclopropanecarboxylic acid ((+/-)-TAMP)
            can differentiate rat rho3 from human rho1 and rho2 recombinant
            GABA(C) receptors
  JOURNAL   Br J Pharmacol 135 (4), 883-890 (2002)
   PUBMED   11861315
REFERENCE   4  (bases 1 to 1861)
  AUTHORS   Ogurusu,T. and Shingai,R.
  TITLE     Cloning of a putative gamma-aminobutyric acid (GABA) receptor
            subunit rho 3 cDNA
  JOURNAL   Biochim Biophys Acta 1305 (1-2), 15-18 (1996)
   PUBMED   8605242
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Nov 27, 2020 this sequence version replaced NM_138897.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: D50671.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-311               JAXUCZ010000011.1  54424156-54424466   c
            312-424             JAXUCZ010000011.1  54413251-54413363   c
            425-492             JAXUCZ010000011.1  54405001-54405068   c
            493-716             JAXUCZ010000011.1  54401281-54401504   c
            717-799             JAXUCZ010000011.1  54397966-54398048   c
            800-940             JAXUCZ010000011.1  54396811-54396951   c
            941-1093            JAXUCZ010000011.1  54390235-54390387   c
            1094-1290           JAXUCZ010000011.1  54381482-54381678   c
            1291-1861           JAXUCZ010000011.1  54372017-54372587   c
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q12"
     gene            1..1861
                     /gene="Gabrr3"
                     /note="gamma-aminobutyric acid type A receptor subunit
                     rho3"
                     /db_xref="GeneID:192258"
                     /db_xref="RGD:621564"
     exon            1..311
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     CDS             196..1590
                     /gene="Gabrr3"
                     /note="gamma-aminobutyric acid receptor subunit rho-3;
                     GABA(A) receptor subunit rho-3; GABA(C) receptor; GABA
                     receptor rho-3 subunit; gamma-aminobutyric acid (GABA)
                     receptor, rho 3; gamma-aminobutyric acid (GABA) A
                     receptor, rho 3; gamma-aminobutyric acid type A receptor
                     rho3 subunit; GABAAR subunit rho-3"
                     /codon_start=1
                     /product="gamma-aminobutyric acid receptor subunit rho-3
                     precursor"
                     /protein_id="NP_620252.1"
                     /db_xref="GeneID:192258"
                     /db_xref="RGD:621564"
                     /translation="MVLAFWLAFFTYTWITLMLDASAVKEPHQQCLSSPKQTRIRETR
                     MRKDDLTKVWPLKREQLLHIEDHDFSTRPGFGGSPVPVGIDVQVESIDSISEVNMDFT
                     MTFYLRHYWKDERLSFPSTTNKSMTFDRRLIQKIWVPDIFFVHSKRSFIHDTTVENIM
                     LRVHPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNK
                     SLNTEEHISLSQFFIEEFSASSGLAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAM
                     LMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIVTGVSASMPQVSYVKAVDVYMWVS
                     SLFVFLSVIEYAAVNYLTTVEEWKQLNRRGKISGMYNIDAVQAMAFDGCYHDGETDVD
                     QTSFFLHSEEDSMRTKFTGSPCADSSQIKRKSLGGNVGRIILENNHVIDTYSRIVFPV
                     VYIIFNLFYWGIYV"
     exon            312..424
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            425..492
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            493..716
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            717..799
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            800..940
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            941..1093
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            1094..1290
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
     exon            1291..1861
                     /gene="Gabrr3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caaagagaca cagcccgtga gtgatgccag tctacttaat ctacaaaaac aacgggcagc
       61 actgagggca gcgtctgctt gtttcttctt agttcatttt cgtgacatga tatttatttt
      121 gtgaaagacg cgtggtcagg aaacctcagt agctgtgttg gtggcatctc ccagcattcc
      181 ttccttctgg aagacatggt cctggctttt tggttggcct tcttcaccta cacctggatc
      241 acactgatgc tggatgcttc tgccgtcaag gaaccccacc agcaatgcct ctcttcaccg
      301 aaacaaaccc gcattcggga aactagaatg aggaaagatg accttactaa agtctggccc
      361 ctgaaacgtg aacaactgtt gcacattgaa gaccatgatt tctccacgag gcctggattt
      421 ggaggttcac cagtgccagt gggtatagat gtccaggttg aaagcattga cagcatttca
      481 gaggtcaaca tggactttac catgacgttt tatctcaggc actattggaa ggatgagagg
      541 ctctcctttc ctagcactac aaacaaaagc atgacctttg atcgcagatt gattcaaaag
      601 atttgggtgc ctgatatctt ctttgtccat tctaaaagat ccttcatcca tgacacaact
      661 gtggagaata tcatgcttcg agtacatccc gatggaaacg ttctcttcag tctcaggata
      721 acagtttcag ccatgtgctt tatggacttc agcaggtttc ctctggacac tcagaactgt
      781 tctctagagc tggaaagcta tgcctataat gaagaggacc taatgctcta ctggaaacat
      841 ggtaacaagt ccttaaacac agaagagcac atttcccttt ctcagttctt cattgaggag
      901 ttcagtgcat ccagtggatt ggctttctat agcagcacag ggtggtacta caggcttttc
      961 atcaactttg tgctacggag gcacattttc ttctttgtac tgcagaccta tttcccagcc
     1021 atgttgatgg taatgctttc atgggtttca ttctggatcg accgaagagc tgttcctgca
     1081 agagtttccc tgggaatcac cacggtgctc accatgtcca caatcgtcac tggtgtgagc
     1141 gcctctatgc cccaggtgtc atatgtgaag gcagtggatg tgtacatgtg ggtcagctcc
     1201 ctcttcgtgt ttctgtcagt cattgagtat gcagccgtga attacctcac cacagtggaa
     1261 gagtggaagc agctcaacag gaggggaaag atatctggaa tgtacaatat tgatgcagtt
     1321 caagccatgg ccttcgatgg ctgctatcat gacggtgaga ctgacgtgga ccagacttcc
     1381 ttctttctac actctgaaga ggactccatg agaacaaagt tcacaggaag tccctgtgca
     1441 gattcatctc agataaagag aaaatccctg ggaggaaatg ttggtagaat catcctggaa
     1501 aataaccacg tcattgatac ctactctaga attgtcttcc ccgttgttta cataatattt
     1561 aatttgtttt actggggtat atatgtgtga agaggacttt ttgcttgctg actttttcct
     1621 ttctttgcag tactcaggat gttgcatgtg ctagataatt attttaccat ccacagcctg
     1681 aagaggagtg ttttctataa acttccgttg gagtcagatg gtgttattta cctcctggat
     1741 ataagttggg cagttaaact gggatagagc cagtcatgtc tcttggcctc aagaagatgt
     1801 aaacgatgat tgattaacat ttattgaaat gttcggagtc ttggggaatt ttggcttttt
     1861 t
//
