LOCUS       NM_001014018            1919 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus Friend virus susceptibility 1 (Fv1), mRNA.
ACCESSION   NM_001014018 XM_218608
VERSION     NM_001014018.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Bonaldo,M.F., Lennon,G. and Soares,M.B.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC060592.1, FM122595.1 and AI574762.1.
            
            On Oct 4, 2011 this sequence version replaced NM_001014018.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC060592.1, EV766469.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1134              BC060592.1         5-1138
            1135-1677           FM122595.1         87-629
            1678-1919           AI574762.1         1-242               c
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..1919
                     /gene="Fv1"
                     /gene_synonym="RGD1309326"
                     /note="Friend virus susceptibility 1"
                     /db_xref="GeneID:308568"
                     /db_xref="RGD:1309326"
     exon            1..37
                     /gene="Fv1"
                     /gene_synonym="RGD1309326"
                     /inference="alignment:Splign:2.1.0"
     exon            38..81
                     /gene="Fv1"
                     /gene_synonym="RGD1309326"
                     /inference="alignment:Splign:2.1.0"
     exon            82..139
                     /gene="Fv1"
                     /gene_synonym="RGD1309326"
                     /inference="alignment:Splign:2.1.0"
     exon            140..179
                     /gene="Fv1"
                     /gene_synonym="RGD1309326"
                     /inference="alignment:Splign:2.1.0"
     exon            180..211
                     /gene="Fv1"
                     /gene_synonym="RGD1309326"
                     /inference="alignment:Splign:2.1.0"
     exon            212..1902
                     /gene="Fv1"
                     /gene_synonym="RGD1309326"
                     /inference="alignment:Splign:2.1.0"
     CDS             272..1126
                     /gene="Fv1"
                     /gene_synonym="RGD1309326"
                     /codon_start=1
                     /product="uncharacterized protein C19orf48 homolog"
                     /protein_id="NP_001014040.2"
                     /db_xref="GeneID:308568"
                     /db_xref="RGD:1309326"
                     /translation="MAERVLVPTQIGRGDRYYTYTELLAISRRFKQNPNELMVTWILR
                     VYDQGGPALSLNSGELGLLGDLTHDAIFNYRCKALRGAGCQTLLSWLLQAWRQRWESS
                     LHFEATELPFRPWTTMEEGIQLVRELGMIEWIYLDPEGPVDLAPEDVAFTQGLQRRLL
                     TAAPSELRLSLVSLLVRGMTVLEAVMEIQTIADVGLLWRQSHPGRTKLMLGPNPTRKD
                     LLGWLLSHGVPREQVDRQPTKVLLELYIKEAKRSRGHPNYGLTEEQPPPPPYSDQACG
                     EEQPVRHD"
ORIGIN      
        1 gcctgtggcg attgcgtgtg aggtgaggtc tttaccggtg tatcttgaag ccaagaagtc
       61 atccatcatc ttcttactgt ggtggctaag tcggaagaat cctgagttca tgtccagcct
      121 gggctacata gaaaaataaa caagaggcgg ttccttcaaa caaccaggct tctctctggg
      181 tggtttctgc agacagtcta cttcccttca gcctctgcaa cagcattgct tctagctgta
      241 ttgctatctt taccttgaga ctgtgagggc catggcggag agagtgctgg tgcccaccca
      301 gataggccgg ggggaccgct actacacata cacggagctg ttggctatct caaggcgttt
      361 caagcagaat cccaatgagc tgatggtcac ctggatcctg cgggtgtatg accagggagg
      421 ccctgccctg tccctgaatt ccggggagct ggggctactg ggtgacctca cccatgatgc
      481 catctttaac taccgctgca aagccctacg gggggctggc tgccagactc tactgagctg
      541 gctactgcag gcctggcgtc agcgctggga atcctccctg cattttgagg ccactgagct
      601 acctttcagg ccctggacca ctatggagga aggcatccaa ctggttcgtg agctgggcat
      661 gattgaatgg atctaccttg acccagaagg gcctgtggac ctggccccag aggatgtggc
      721 tttcactcaa ggcctgcagc ggcgcctgct cacagcagca ccctctgagc tacggctttc
      781 actggtcagc ctgctggtgc gtggcatgac agtattggag gctgtgatgg agatccagac
      841 tattgctgat gtgggcctgc tctggcgcca gagccatcca ggccgcacca agctcatgct
      901 ggggcccaac ccaactcgca aggacctcct aggctggctg ctcagccatg gtgtacccag
      961 ggaacaagta gacaggcagc ctaccaaggt actcctggaa ctgtacatca aagaggccaa
     1021 gcgcagtcgt ggtcacccca actatgggct aaccgaggag cagcccccac caccccctta
     1081 ctctgaccag gcctgtgggg aagagcagcc ggtgcgtcat gactagtcct ggactgacat
     1141 caagaggaca cctgcacccc agggttgaag gtggggaaat gaattgcaaa gaggctgcct
     1201 gtaacccagg tcattaggaa gcagcttggc aagcaccttc cccacattcc catccctaca
     1261 gcacttaagg ccaaactcag tggccccaaa gaggagtgtg catgttccta gccacacagt
     1321 ccatgtggaa agtgagctac aggtggccat tggctgtgat tctagggtgt ttatggccct
     1381 ggacttaatc cccttgagtt ggagcttaac gcaatgctaa gatgtgtggc cacttcaggg
     1441 tccccacccc tctgcctcca catgggcccc aaagcactac atacaggcca tcttgaattt
     1501 tttacttttt caatgcaaca cttacataga ttttaggtat aggctgcact tccatggact
     1561 tatactggat gtttgacact tgagggccag tctcctattg taaaggctta acattgcaaa
     1621 cttttctaat gcagcatttt tactttatat tttattttga gcttatgtga cacttttttg
     1681 tggggaggag aacccccttt tgtaaagact ttgctttggg gaccctgtcc ccattttctt
     1741 ttaaccatac ccttccctct tgaagcacct tccagctggg tctggtctcc ctggctgcac
     1801 agatggcctc tggccaatgt agatctggat ttagtggagg ggtgaggtgg gcagccctgg
     1861 aacttttgcc ttcgtgagtt cctattaaat ggctggatca ttaaaaaaaa aaaaaaaaa
//
