LOCUS       XM_006229060            1334 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fuzzy planar cell polarity protein
            (Fuz), transcript variant X3, mRNA.
ACCESSION   XM_006229060
VERSION     XM_006229060.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006229060.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006229060.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1334
                     /gene="Fuz"
                     /gene_synonym="RGD1310608"
                     /note="fuzzy planar cell polarity protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 75 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:308577"
                     /db_xref="RGD:1310608"
     CDS             123..1295
                     /gene="Fuz"
                     /gene_synonym="RGD1310608"
                     /codon_start=1
                     /product="protein fuzzy homolog isoform X3"
                     /protein_id="XP_006229122.1"
                     /db_xref="GeneID:308577"
                     /db_xref="RGD:1310608"
                     /translation="MGDDGPGSTVHLLCLAASSGVPLFCRSSSGGAPSRQQLPFSVIG
                     SLNGVHMFGQNLDVQLNSARTEDTTVVWKNFHDSITLIALSSEEGTSELKLERMLHMV
                     FGAMVLIVGLEELTNIRNVERLKKELRASYCLIDSFLGNSELIGDLTQCVDCVIPPEG
                     SVMQETLSGFAEATGTAFVSLLVSGRVVAATDGWWRLGMPEAVLLPWLVGSLPPQAAR
                     DYPVYLPHGSPTVPHRLLTLTLLRGLELCLLCGPRPPLGELDPQLLERWWQPLLEPLR
                     ACLPLGPRALPDGFPLHSDILGLLLLHLELRRCLFTVEPSKDKEPGPAEKQEDTVHPA
                     QTPRACYLVLGPGMGWQLVAVQLGLRLLLLMLSPQTPTHGLRSLATHTLQALTPLL"
ORIGIN      
        1 ttgatgatcc cgcttctcgc cctttggcgg ctccaaacag caggccactt tgcctacccg
       61 catgctccca gatccacacc gagagtctcc aggggcgtga ctttccgggt gcgggcttcg
      121 agatggggga tgacgggcca ggaagcacgg tgcatctgct gtgcctcgca gcctctagcg
      181 gggttcccct gttctgtcgg agcagcagcg gaggcgcccc ctcccgtcaa cagctccctt
      241 tttctgtcat cgggtccctc aatggagtcc acatgttcgg ccagaatctg gatgtgcaac
      301 tgaactccgc aagaacagaa gacaccaccg tagtgtggaa gaacttccat gacagcatca
      361 ccctcattgc tctgtcatct gaggagggca cctctgagct gaagctggaa agaatgctcc
      421 acatggtgtt tggggccatg gttctcattg tgggacttga ggagctgacc aatatccgga
      481 atgtagagag actgaagaaa gagctgaggg ccagctactg tctcattgac agcttcctgg
      541 ggaattcaga gctcatcggg gacctgaccc agtgtgtgga ctgtgtcatt cctccagagg
      601 ggtctgtcat gcaggaaacc ctctcagggt tcgcagaggc cactggcaca gcctttgtca
      661 gcctgctggt atcaggccgg gtggtggcag cgaccgatgg ctggtggcgc ctaggcatgc
      721 ctgaagccgt gctactccct tggctggtgg ggtccttgcc accgcaagct gctcgtgact
      781 acccagtgta cctgccccac gggagcccca cggtccccca tcggttgttg accttgactc
      841 tgctgcgggg cctggagctg tgtctgctct gcgggccgcg cccgcccctc ggtgagctgg
      901 acccacagtt gctggaacgc tggtggcagc ctctgctgga gcccctccgg gcttgcctgc
      961 cactgggccc tagggcgctc cctgacgggt tcccgctaca cagcgatatt cttggcctgt
     1021 tgttactcca cttggaactg agacgctgcc tctttaccgt ggagccctca aaggataaag
     1081 aaccggggcc agcagagaaa caagaagata cagtccaccc agcccagaca cccagggcct
     1141 gctatcttgt gctagggcca ggcatggggt ggcagctggt ggctgtgcag ctagggctac
     1201 ggctgctgct gttgatgctg tccccgcaga ctcccaccca tgggctgaga agcctggcca
     1261 cccacactct acaagccctc accccgctcc tttgatcact tagggtgggc agtcaataga
     1321 tgggggtaat atta
//
