LOCUS       NM_001135757            1397 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus FUN14 domain containing 2 (Fundc2), mRNA.
ACCESSION   NM_001135757 XM_341573
VERSION     NM_001135757.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 1397)
  AUTHORS   Zhao,X., Leon,I.R., Bak,S., Mogensen,M., Wrzesinski,K., Hojlund,K.
            and Jensen,O.N.
  TITLE     Phosphoproteome analysis of functional mitochondria isolated from
            resting human muscle reveals extensive phosphorylation of inner
            membrane protein complexes and enzymes
  JOURNAL   Mol Cell Proteomics 10 (1), M110.000299 (2011)
   PUBMED   20833797
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On Oct 10, 2008 this sequence version replaced XM_341573.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EV763723.1, CO385002.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760475,
                                           SAMN12840107 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-134               JAXUCZ010000018.1  152126-152259       c
            135-285             JAXUCZ010000018.1  150134-150284       c
            286-361             JAXUCZ010000018.1  149814-149889       c
            362-493             JAXUCZ010000018.1  148559-148690       c
            494-1397            JAXUCZ010000018.1  146600-147503       c
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p13"
     gene            1..1397
                     /gene="Fundc2"
                     /gene_synonym="RGD1560916"
                     /note="FUN14 domain containing 2"
                     /db_xref="GeneID:361288"
                     /db_xref="RGD:1560916"
     exon            1..134
                     /gene="Fundc2"
                     /gene_synonym="RGD1560916"
                     /inference="alignment:Splign:2.1.0"
     CDS             116..571
                     /gene="Fundc2"
                     /gene_synonym="RGD1560916"
                     /codon_start=1
                     /product="FUN14 domain-containing protein 2"
                     /protein_id="NP_001129229.1"
                     /db_xref="GeneID:361288"
                     /db_xref="RGD:1560916"
                     /translation="MAANGQGDPDRKREALDLAEFTRRQPWWRKLFGPESGPSAEKYS
                     AATQLAVGGVTGWCTGLVFRKVGKLAATALGGGFFLLQLASHTGYIRVDWQRLEKDVK
                     KAKAQLKIHRGRQMPTEVGSKAEEALSFVKKNVPVAAGFLGGFLLGLAS"
     exon            135..285
                     /gene="Fundc2"
                     /gene_synonym="RGD1560916"
                     /inference="alignment:Splign:2.1.0"
     exon            286..361
                     /gene="Fundc2"
                     /gene_synonym="RGD1560916"
                     /inference="alignment:Splign:2.1.0"
     exon            362..493
                     /gene="Fundc2"
                     /gene_synonym="RGD1560916"
                     /inference="alignment:Splign:2.1.0"
     exon            494..1397
                     /gene="Fundc2"
                     /gene_synonym="RGD1560916"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccccacacg ccggaaatag cagccgcaca cgccggaaac cggcggcggg tgacgaacgc
       61 cctttcctga gctcttgatc tgaagtcgtg tcctcttggt actccctccc cggaaatggc
      121 cgccaacggt caaggggacc ccgacaggaa gcgcgaggcc ctggacctcg cggaattcac
      181 gcggaggcaa ccatggtggc gtaagctgtt cgggccagag tctgggccct cggctgagaa
      241 gtacagcgcg gcgacgcagc tggccgtcgg gggtgtcact ggatggtgca cggggctcgt
      301 gttccggaag gtcggaaagc tggcagccac ggccctagga ggagggttct tcctcctgca
      361 gctggcaagc cacacggggt acatcagagt cgactggcag agactggaaa aagacgtaaa
      421 gaaagccaag gcgcagctga agatccatag gggtcggcaa atgcccactg aggtcgggag
      481 caaagccgag gaggccctgt cgttcgtgaa gaagaatgtt ccagtagccg cagggtttct
      541 tggaggcttc ctgctcggcc tggcgtcctg agggtgtcac gtggccccta tagcgaatcc
      601 tatagcaggc cctatagcag atcttaaagc agatgctata gcagatccta tagcaaacct
      661 tatagccaat ttcatagcaa accttatagt agatcctata gcaaatccta tagcaaacct
      721 tatagtgaat cttacagcga tatatatata tatatataat attttatggt attttattat
      781 atacattatt acactaaggt attttattat atatatataa taacttatgg tattttatta
      841 tatctattat acactaatgt attttattat atatatataa tatttatggt attttactat
      901 atacattatt gtacattgag gtattttatt atatatatat atatatatat atgtatatat
      961 atatatatat atataccgtc cttattacag aaccaataac agacctttaa caccgagcac
     1021 gtgccgtgtg ttaacccctc cccctgtgtg catcgcatgt tgattgataa ccgcgtccac
     1081 catctgcgtt gtgatcccct gtgttcttct cgaggttcaa aggtcatcac gagcagtggt
     1141 catcacgagt ggtcaagcct cagatcccgc cctcgtctga aataaaatct gagtctgccc
     1201 tgaggtccgc gcaggccgca cttgtgtttg tgcagaggag gcgctgagag ggtgggacag
     1261 taaagcacag gcagctcgcc tgaaggtcca gagttcaatt cctggcagcc acgtggtggc
     1321 tcacaaccgt gtgtcatggg acacagtgta ctcatataag taaatcttta taaattgtgt
     1381 acgctttaca tgttaca
//
