LOCUS       NM_001037653            2380 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus far upstream element binding protein 1 (Fubp1),
            mRNA.
ACCESSION   NM_001037653 XM_342409
VERSION     NM_001037653.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Fu,P.Y., Hu,B., Ma,X.L., Tang,W.G., Yang,Z.F., Sun,H.X., Yu,M.C.,
            Huang,A., Hu,J.W., Zhou,C.H., Fan,J., Xu,Y. and Zhou,J.
  TITLE     Far upstream element-binding protein 1 facilitates hepatocellular
            carcinoma invasion and metastasis
  JOURNAL   Carcinogenesis 41 (7), 950-960 (2020)
   PUBMED   31587040
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Chen,Y., Liu,J., Geng,N. and Feng,C.
  TITLE     Upregulation of far upstream element-binding protein 1 (FUBP1)
            promotes tumor proliferation and unfavorable prognosis in tongue
            squamous cell carcinoma
  JOURNAL   Int J Biol Markers 35 (2), 56-65 (2020)
   PUBMED   32339054
REFERENCE   3  (bases 1 to 2380)
  AUTHORS   Kang,M., Kim,H.J., Kim,T.J., Byun,J.S., Lee,J.H., Lee,D.H., Kim,W.
            and Kim,D.Y.
  TITLE     Multiple Functions of Fubp1 in Cell Cycle Progression and Cell
            Survival
  JOURNAL   Cells 9 (6), 1347 (2020)
   PUBMED   32481602
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2380)
  AUTHORS   Xiong,X., Zhang,J., Hua,X., Cao,W., Qin,S., Dai,L., Liu,W.,
            Zhang,Z., Li,X. and Liu,Z.
  TITLE     FBP1 promotes ovarian cancer development through the acceleration
            of cell cycle transition and metastasis
  JOURNAL   Oncol Lett 16 (2), 1682-1688 (2018)
   PUBMED   30008853
REFERENCE   5  (bases 1 to 2380)
  AUTHORS   Zhang,J., Xiong,X., Hua,X., Cao,W., Qin,S., Dai,L., Liang,P.,
            Zhang,H. and Liu,Z.
  TITLE     Knockdown of FUSE binding protein 1 enhances the sensitivity of
            epithelial ovarian cancer cells to carboplatin
  JOURNAL   Oncol Lett 14 (5), 5819-5824 (2017)
   PUBMED   29113212
REFERENCE   6  (bases 1 to 2380)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   7  (bases 1 to 2380)
  AUTHORS   Rabenhorst,U., Beinoraviciute-Kellner,R., Brezniceanu,M.L.,
            Joos,S., Devens,F., Lichter,P., Rieker,R.J., Trojan,J., Chung,H.J.,
            Levens,D.L. and Zornig,M.
  TITLE     Overexpression of the far upstream element binding protein 1 in
            hepatocellular carcinoma is required for tumor growth
  JOURNAL   Hepatology 50 (4), 1121-1129 (2009)
   PUBMED   19637194
REFERENCE   8  (bases 1 to 2380)
  AUTHORS   Weber,A., Kristiansen,I., Johannsen,M., Oelrich,B., Scholmann,K.,
            Gunia,S., May,M., Meyer,H.A., Behnke,S., Moch,H. and Kristiansen,G.
  TITLE     The FUSE binding proteins FBP1 and FBP3 are potential c-myc
            regulators in renal, but not in prostate and bladder cancer
  JOURNAL   BMC Cancer 8, 369 (2008)
   PUBMED   19087307
  REMARK    Publication Status: Online-Only
REFERENCE   9  (bases 1 to 2380)
  AUTHORS   Jeong,Y., Leskow,F.C., El-Jaick,K., Roessler,E., Muenke,M.,
            Yocum,A., Dubourg,C., Li,X., Geng,X., Oliver,G. and Epstein,D.J.
  TITLE     Regulation of a remote Shh forebrain enhancer by the Six3
            homeoprotein
  JOURNAL   Nat Genet 40 (11), 1348-1353 (2008)
   PUBMED   18836447
REFERENCE   10 (bases 1 to 2380)
  AUTHORS   Trinidad,J.C., Specht,C.G., Thalhammer,A., Schoepfer,R. and
            Burlingame,A.L.
  TITLE     Comprehensive identification of phosphorylation sites in
            postsynaptic density preparations
  JOURNAL   Mol Cell Proteomics 5 (5), 914-922 (2006)
   PUBMED   16452087
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC107942.1.
            
            On Dec 9, 2005 this sequence version replaced XM_342409.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC107942.1, SRR8487231.41888.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q45"
     gene            1..2380
                     /gene="Fubp1"
                     /note="far upstream element binding protein 1"
                     /db_xref="GeneID:654496"
                     /db_xref="RGD:1591892"
     exon            1..167
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             60..1979
                     /gene="Fubp1"
                     /note="FBP; far upstream element (FUSE) binding protein 1;
                     FUSE-binding protein 1"
                     /codon_start=1
                     /product="far upstream element-binding protein 1"
                     /protein_id="NP_001032742.1"
                     /db_xref="GeneID:654496"
                     /db_xref="RGD:1591892"
                     /translation="MADYSTVPPPSSGSAGGGGGGGVNDAFKDALQRARQIAAKIGGD
                     AGTSLNSNDYGYGGQKRPLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQRSVMTEEYKV
                     PDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLD
                     QIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ
                     DGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVP
                     IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEII
                     TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGE
                     TIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG
                     PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNA
                     YPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQ
                     QNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQT
                     SPQGMPQHPPAPQGQ"
     exon            168..258
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            259..297
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            298..337
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            338..387
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            388..459
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            460..517
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            518..680
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            681..779
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            780..881
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            882..984
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            985..1085
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1086..1227
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1228..1388
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1389..1540
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1541..1620
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1621..1749
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1750..1824
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1825..1970
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1971..2346
                     /gene="Fubp1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcagttagcc gagaggggaa cctccgcgag gaaacagcgg cgtcttctat agcgtgggta
       61 tggccgacta ctcaacagta cctccgccgt cttctggctc agctggcggc ggcggcggcg
      121 gaggagttaa tgatgctttc aaagatgccc tgcagagagc gcggcagatt gcagcaaaaa
      181 ttgggggtga tgctggtaca tcattgaatt caaatgacta tggttatggg ggacaaaaga
      241 gacccttaga agatggagat caaccagatg ctaagaaagt acctccccaa aatgattctt
      301 ttggagcaca gttacctcca atgcatcagc aacaaagatc tgtaatgaca gaagaataca
      361 aagttccaga tggaatggtt ggatttataa ttggcagagg aggtgaacag atctcacgca
      421 tacagcagga atctggatgc aaaatacaga tagctcctga tagtggtggc cttccagaaa
      481 ggtcttgtat gctaacggga acgcctgaat ctgttcaatc agcaaaaaga ttattggacc
      541 agatcgttga aaagggaaga ccagcccctg gctttcatca tggtgatgga cctggcaatg
      601 cagttcagga aatcatgatt ccagccagca aagcaggact agttatcgga aagggaggag
      661 agactatcaa acaacttcag gaaagggctg gtgttaaaat ggttatgatt caagatgggc
      721 ctcaaaacac tggtgctgat aaacctctta ggattacggg tgacccatac aaagttcagc
      781 aagccaagga aatggtatta gaattaattc gcgatcaagg tggtttcaga gaagtgcgga
      841 atgagtatgg ctccagaata ggaggaaatg aagggataga tgtcccaatt ccaagatttg
      901 ctgttggcat tgtaatagga agaaatggag aaatgattaa aaaaatacaa aatgatgctg
      961 gtgttcgaat tcagtttaag ccagatgatg gaacaacacc tgatagaata gcacagataa
     1021 caggacctcc agacagatgt cagcatgctg cagaaattat cacagacctt ctacgaagtg
     1081 ttcaggctgg caatcctggt ggacctggac ctggtggtcg aggacgaggt cgaggtcaag
     1141 gaaactggaa tatgggacct cctggtggac ttcaggaatt taatttcatt gtgccaactg
     1201 ggaaaactgg attgataatt ggaaaaggag gagaaacaat aaaaagcata agccagcagt
     1261 ccggtgcaag aatagaactt cagagaaacc ctccacctaa tgcagatccc aatatgaagt
     1321 tatttacaat tcggggcact ccacagcaaa tagactatgc tcgacaactc atagaagaga
     1381 agattggggg cccagtaaat cctttagggc caccagtacc ccatggacct catggggttc
     1441 caggtcctca tgggcctcct ggacctccag ggcctggaac tccaatgggg ccatacaacc
     1501 ctgcacctta taatccagga cctcctggcc cagctcctca tggtcctcca gccccatatg
     1561 ctccccaggg atggggaaat gcatatccac attggcagca gcaggctcct cctgacccag
     1621 ctaaggcagg aacggatcca aactcggcag cttgggctgc ctattatgcc cactattacc
     1681 agcagcaggc acagcccccg cctgcagctc ctgctggagc accaaccaca acccagacta
     1741 atggacaagg agatcagcag aatccagctc cagctggaca agttgattat acaaaggctt
     1801 gggaagagta ctacaagaaa atgggtcaag cagttcctgc tcctgctggg gccccaccag
     1861 gtggtcagcc agattacagt gcagcctggg ctgaatacta tagacagcaa gcagcatact
     1921 atgcccagac cagtccccag ggaatgccgc agcatccgcc agcacctcag ggccaataat
     1981 aagaagtgga caatacagta tttgcttcat tgtgtggggg aaaaaacctt tgttaaatat
     2041 atggatgcag acgacttgat gaagatctta attttgtttt tggtttaaag tagtgttttt
     2101 ttcccccctc ttttttttat tttgaaaatg tacaaaatat ctatcactac tgataggagg
     2161 ttaatatttc tgtgtagaaa tgaaaattgg tttgtttcag tctttagtgt agatgtacac
     2221 attccagcaa atgtatttgc aactattatg tggtcgatgc tttgtgatat aaatgtactt
     2281 tttcaatgta tactttcact tttcaatgcc tgttttgtgc tttacaataa atgatatgaa
     2341 acctccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
