LOCUS       XM_039104545            1488 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fibrous sheath interacting protein 1
            (Fsip1), transcript variant X7, mRNA.
ACCESSION   XM_039104545
VERSION     XM_039104545.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1488
                     /gene="Fsip1"
                     /note="fibrous sheath interacting protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 ESTs, 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     9 samples with support for all annotated introns"
                     /db_xref="GeneID:296074"
                     /db_xref="RGD:1306874"
     CDS             115..1473
                     /gene="Fsip1"
                     /codon_start=1
                     /product="fibrous sheath-interacting protein 1 isoform X6"
                     /protein_id="XP_038960473.1"
                     /db_xref="GeneID:296074"
                     /db_xref="RGD:1306874"
                     /translation="MTLECQWSQSVPRRPAIVPTEKLRDRVDHGQRMSMDIIKGNLDG
                     ISKPASSSRSRPGSRSSNGSLEVLSPEPGPVKIDMVNKLNSGKEGHTSDSRVEERRKI
                     SDDEWADNPRSTEPAQESSDEDSNLSQPQGTPEHSDDPKLEGTDAVLQNAIHKMHRLD
                     KILAKRRIREKEIKKQGLEMRIKLWEELKSAKNTEDLENDEELENTKKFLYLTSKSAG
                     TAAVEPLHCKFEDDLFSVFHTQIPQETYENHTEKDFTCDVEKNGPLIKTEKQPFSNTE
                     AIEPRSEHSQVFIIRNAEHSQDFIKRNIELAKSSRSPVVMVEGEKKRLDELLKGLEDT
                     DSGLSSSEGDQCAWLVPGEGYTLAATESQQLAEIDIKLQELSVDSPAVFSLESQSNKG
                     DMEHDSNEERNTEPTPGEKILRDNKEQRDRESRLRAIDGKLKEINEQGPSFHLSFSRS
                     TF"
ORIGIN      
        1 cgcgcgcgct tctagttgcc agggcaacag cgttccttga agcagcccgc tgcctctttc
       61 atcttcacag aggaggcggt ggcgggaaaa ccggtcccct tcgaagggaa gtgtatgacg
      121 ctcgaatgtc agtggagcca gtcagtacct agacgtccag ccatcgtccc cacggaaaag
      181 ttgagggacc gcgtggacca cgggcagagg atgtcaatgg atattataaa aggaaaccta
      241 gatggaattt caaaaccagc ctcaagttca agatcacgtc ctgggagccg aagttcaaac
      301 ggttctctgg aggtgctctc gccagaacca gggcctgtca agattgacat ggtgaacaag
      361 ctgaattctg gcaaagaggg ccacacatcg gacagtagag tggaagaaag aaggaagatc
      421 agtgacgacg agtgggcgga caaccccagg agcacagaac cagcccaaga gagctcagac
      481 gaagactcga acctgagcca acctcagggg acccctgagc attcagatga tcccaagtta
      541 gaagggacgg atgctgtact tcaaaatgcc attcataaga tgcacagact cgacaagata
      601 ttggccaaaa gacgaattag agaaaaggaa attaaaaagc aaggcctaga aatgagaatt
      661 aagctgtggg aagagctcaa gtctgcaaaa aacactgaag acttggaaaa tgacgaggag
      721 ctggaaaaca ctaaaaagtt tttgtacttg acttccaaat ctgcagggac agcagctgta
      781 gagccattgc actgcaaatt cgaagatgac cttttctcag tgtttcatac tcagattcct
      841 caggaaactt acgaaaatca cacggagaag gactttacct gtgatgtgga gaaaaatggg
      901 ccattgatca aaacagaaaa gcaaccgttt tcaaatacag aagcgattga gcctaggagc
      961 gaacacagcc aggttttcat tatacggaac gctgaacata gtcaggattt tattaagcga
     1021 aacattgagt tggccaagag ttcaagaagc ccagtggtta tggttgaagg agagaagaaa
     1081 cgtctggatg agctcctgaa aggcttagaa gatacagact caggactgtc cagttccgag
     1141 ggcgatcagt gtgcttggct ggttccagga gaaggctata cccttgcagc caccgagtct
     1201 cagcagcttg ctgagattga cataaagctc caggagctct ccgtggactc tcctgccgtc
     1261 ttcagccttg aaagtcagag caacaagggt gatatggaac atgactccaa tgaagaaaga
     1321 aatacggaac caactccagg ggagaagata ctccgggaca acaaagagca aagggaccgt
     1381 gagtctcggc tgagagccat cgatgggaag ctgaaagaga tcaatgaaca gggaccatca
     1441 tttcacctca gtttttccag atcaacattt tagtttccac aagtgagt
//
