LOCUS       XM_008763722            7377 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fibronectin type III and SPRY domain
            containing 1-like (Fsd1l), transcript variant X1, mRNA.
ACCESSION   XM_008763722
VERSION     XM_008763722.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008763722.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008763722.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7377
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7377
                     /gene="Fsd1l"
                     /note="fibronectin type III and SPRY domain containing
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 28 ESTs, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 59 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:313208"
                     /db_xref="RGD:1564809"
     CDS             182..1708
                     /gene="Fsd1l"
                     /codon_start=1
                     /product="FSD1-like protein isoform X1"
                     /protein_id="XP_008761944.1"
                     /db_xref="GeneID:313208"
                     /db_xref="RGD:1564809"
                     /translation="MDSQKEALQRIISTLANKNDEIQNFIDTLNHTLKGVQENSSNIL
                     SELDEEFDSLYSILDDVKESMINTIKQEQVHKSQELQSQLSQCNNALENSEELLEFAT
                     RSLDIKEPEEFSKAARQIKDRVTMASAFRLSLKPKVSDNMTHLMVDFSQERQMLQTLK
                     FLPVPKAPEIDPVECLVADNSVTVAWRMPEEDNKIDHFIMEYRKTNFEGLPRVKDERC
                     WEVIDNIKGTEYTLSGLKFDSKYMNFRVRARNKAVAGEYSDPVTLETKALNFSLDNSS
                     SHLNLKVEDSCVEWDPTGGKGQESKIKGKENKGSVHVTSLKKHTRSGTPSPKRTSVGS
                     RPPAVRGSRDRFTGESYTVLGDTAIENGQHYWEVKAQKDCKSYSVGVAYKTLGKFDQL
                     GKTNTSWCIHVNSWLQNTFAAKHNNKVKALDVPVPEKIGVFCDFDGGQLSFYDAHSKQ
                     LLYSFKTKFTQPVVPGFMVWCGGLSLSTGMQVPSAVRTLQKSENGMTGSASSLNNVTQ
                     "
ORIGIN      
        1 ccctttcacc ctggcaaccg cggctcggca gcggcgcgcg cgcgggttgg gcgcggacgg
       61 gcggaatctc tgcgggacgg gacagggctg gcgacggccg agatagcggc tctcaaaggc
      121 tccttcggct cctcactcag ctccggtgac tggtttggtc cggagggctt agcctctagt
      181 catggactcg cagaaagaag ctctacaaag aatcatttca actctggcaa ataagaatga
      241 tgagattcag aactttattg atacactaaa ccacacactg aaaggagttc aggaaaattc
      301 ttccaacata ctttcagaat tagatgaaga atttgacagt ttatactcta tattggatga
      361 tgtaaaagaa agcatgatta acaccatcaa gcaggaacaa gtgcataagt cacaggagtt
      421 acagagtcag ctcagtcaat gtaacaatgc cctggagaac tctgaagaac tactagaatt
      481 tgcaacaagg tcgttagata taaaggaacc tgaagaattt tcaaaggctg ccagacagat
      541 caaggataga gtcacaatgg cttcagcctt tcgcctttct ttgaaaccaa aagtcagtga
      601 caacatgacc catttaatgg tggatttctc tcaggaaaga cagatgctgc aaactttgaa
      661 gtttttgcca gtcccaaaag ctccagagat tgacccagtg gagtgtttag tagctgacaa
      721 ctctgtaact gtagcttgga ggatgccaga agaagataat aaaatcgacc atttcataat
      781 ggaatatagg aaaacgaact ttgaaggact tccacgtgta aaagacgagc gatgttggga
      841 agtgattgat aacatcaagg gtactgaata tacattatca ggcttgaaat ttgattcaaa
      901 gtatatgaat ttcagagtga gagcgcgtaa caaagctgtg gctggagagt actctgaccc
      961 agtgacccta gagaccaaag cacttaactt cagtctggat aactcatcat cccatttgaa
     1021 cttgaaagtt gaagattcct gtgtagagtg ggatcctact ggaggaaaag gccaagagag
     1081 taaaattaaa ggaaaggaga ataagggcag tgtccatgtt acttcactga agaaacatac
     1141 aagaagtggt acaccatccc cgaaacggac gtctgtaggc tccaggccac cagcagtaag
     1201 aggcagcaga gaccgtttta ctggggagtc ctacacagtg ctaggagaca ctgctattga
     1261 aaatggacaa cattattggg aagtaaaggc ccagaaggat tgtaaatcct acagtgtggg
     1321 cgtagcatat aaaacgttag gcaaatttga ccagttagga aagacgaaca ctagttggtg
     1381 catccacgtc aacagctggt tacagaacac gtttgcagcc aagcataata ataaagtgaa
     1441 agctttggat gtcccagttc ctgagaaaat aggtgtgttt tgtgactttg atgggggtca
     1501 gctttcattt tatgatgcac actcaaagca gttgctgtat tccttcaaga caaaatttac
     1561 ccagccagta gtacctggct tcatggtttg gtgtggtggc ctttctttga gtactggaat
     1621 gcaggtccca agtgctgtga gaacacttca gaaaagtgaa aacggaatga ctggttcagc
     1681 aagcagcctg aacaatgtca ctcagtaatg gcaactcaga ctgtgtttac cgtcctcttt
     1741 gactgtgtgg cctttcccat acagttacta acagatattt ctgagtgctg gaaatcgggt
     1801 tttctgtgtt ttgctttaaa gcctggaatc tgttagatta actaccaaat aggaagcagc
     1861 catgggaggt tattgctgtg tcccggaatc aagcagttgg ggtgtgggag gatgacagga
     1921 atatttgata gtcaatagga aagggcagtg ttgaactact tatgtagaaa gccatttttc
     1981 tgtttcttaa gcgaccctgg cttgtctagt agtgtaattc cgtctgctga gccttgggcc
     2041 tgggttgtaa agctttaagg cttgccgttc ctcctctccg gtttatgtct tttctcctca
     2101 ctggctgtca ttgagtccta cactgaggct ttaaaaacac caagtcccct aaggcttcct
     2161 agaaattgaa atctttgcct agagatggca gagaaatggc agagaataaa ttcttttata
     2221 aataagctga gcttttgata gagtaactta tgtattggta tttttcttat agttataact
     2281 taaaatatca agcagacaga cagagaatgg cggcagcaca gggagtactg tgtgtctgtg
     2341 ctgagtcatt ctgtcctctc ctccatgctg cttctgggcg ccacatgaga agctgctctc
     2401 tgagtttgtc ctctgcttta accccgcctt tatacctgtc ttggtatctt tgataaaact
     2461 tccacttgaa tttggcaccg gtataaatta ttgcttatag aagtttgtga attaagttct
     2521 ataaagggta aaaagctcta ttactaattt tttgtctgtg aaagattata aagaaatgtg
     2581 cctaaagtat tcttttctga aataatttat atgttctttt acaaagatat gaattggttt
     2641 aatcagctgt ttaaagaata catgtgtcct atttaattgg tatttgtgtt tttcaagcaa
     2701 tcatttgaaa ggttttttgt tttgatttgg tttttgtttc tgtctttttg gtccattcat
     2761 tcactgttta aaagtttgtg attgttccaa aaactgaaca tagttttctt tttcccagat
     2821 ctgaaggagt gtgtgaagca gagagtaaaa cttgtggtta tcaaaagaaa agccttttat
     2881 tacaaagttg attaaaactt tcaactcaag gtttttgagc caattaaaac ttttaacata
     2941 atttttgagc caaactaaaa atggaaattg taaaactgcc ttcagaactt caaagaaatg
     3001 attatttgac ttttgattaa tttttgtacc ttttgaatct cttcttgttt taagtaactc
     3061 gggcttctga aaaagttccc tagagaagtg tccatttttg ctgtctagct tataggatca
     3121 taagaagtat ttgctcttaa aatgtactgc taattggcat ggttgttttg ttctgttgat
     3181 gaaacaaatt tgacatagaa tattattttc catataacaa atatctacac cattgtctga
     3241 taacacactg gcagttttta agattaaagt ggtttataga aggaagtata tcagtattct
     3301 attggttccc caaaacaata ttttactttt catttatcat agcttgaaag acatttttca
     3361 ttgtttcact atctatagaa atggatttca tgacctaagg aaaaaagaat tactcttttt
     3421 tgtagactca tacctgaaag cagtgattta ctggaattgc tttgtgcgtc tactaagtat
     3481 attttgtcaa aaatgacatg ggaagccagc agctgttctt gtatagaact tttcattatg
     3541 atattatatc ttgcatagct tatctactca tttatacagt gcctttttct catgctcatt
     3601 gtctactgaa tttaaggcag gcaacactgt accatagtgg agagggcctt ctattgaggt
     3661 cagaggagca catgtgcttc ttgtctttgt cccatcattt gagaccttca tctacaattt
     3721 ccaaacagtc atgggaaaat gcatgacttt tactgagaag gttttatttc tcagcagctt
     3781 tgtagaacaa agtataaact caatgagtaa gagtccaagt tcttatcatg tgatattagg
     3841 tactaattat acctttgttg ctttaaagta aacatcaggg tctcttttaa aaaagaacaa
     3901 atctgtagta ttttagttta aaaatcttaa gtttattagg gtaggcagaa gtgtgtcaac
     3961 ccttcttttt aaattaaaat aattgaatag agtgcctagt taaatcatct caaaacaagg
     4021 taactatcaa cttgatcata atatgtaaca ttcctttaac attgggttga aatggctgcg
     4081 cttctctgct cagctcagtc cactcagtcc cactgtggaa agcttgcaag ccctctccag
     4141 tattcctcat tgctctgtgt ctgcctgcac accttgaaca ggattacttt ccatgaacgg
     4201 aatatagggg aggtgaccat aagggatata tcaccgttgt gaggaaccaa ttcataaaac
     4261 atggattaag tattgtattt cccttttagc agttgaattc cagaccagtt tcatctagct
     4321 ggaaatagac aggaaggagc tgccttaagc actttagaat ttgctacaat tcatttgact
     4381 caactgattg tgtcacatat tttaaatact ggtaaatatg tatataccaa gtatttaatg
     4441 actaatgtac atggaaattt aatatacagt gatcttttga atgttccagg tataggcttt
     4501 tttaaaagtg ttaaaagtgt ttgtttgtct gtgcgtttaa ttgagagcac ctctaccatg
     4561 tgaccgtaaa ctgctggaca gccagactgg gcttctcact ctgttctaaa gatgttctgt
     4621 tctgaagatt ctgaaaaaag tcaaaccgcc aacaatatta tgtataattt gaacttccat
     4681 gattgatcct tgatataaat aataaaagaa aatatttatg atgaaatatt ttaattagat
     4741 caattaccta gaattactta gtttttttct atatatcttt tccatgaaat tatagctatt
     4801 tatgtatttg cagttatttc tttcaaaaac aatttttaaa aattggaaag ggatatatat
     4861 gggaagtaac tactccaaag aatattcatc ttaaaagaaa acagtatagg cgtcttgcca
     4921 cgaaatacat tactctgggc taaaattcaa ctgttttagt catagatttt tagcatcttt
     4981 gttagatcag catataattc atataacagt tgttaatttt ttatgatgta gcatcaactt
     5041 tctatctagg tttccaaaat gagtagagtt taagtcgcca tctgaaccta attctgctat
     5101 tttttatttg atgtcttgaa ctaaaaataa tgttaatgtg tcattaaatt tctaaaaact
     5161 tcattcatgg gccggcaaga tggctcataa gaaaagcact tgctaccaac aggatagctt
     5221 gagtttgtac cctgggaccc aaatggaagg ggagactgac ctcctgcaag ttgtcttttg
     5281 aattatgcgc acgcgcatgc acgcgcacac acacacactc gcacacacac acacacacac
     5341 acacacacac acacaatgta acaaaatttt tttaaaaagt acatttgttg tagcttgtaa
     5401 aaaataatta tcaaattaac tatacatagt aatatttcac ttttatattg taataaaaag
     5461 tttggaaaag tatccttttt tatttataca tcatattcgt tctgtcggag gtaagcatga
     5521 atttattcag tatccacatc accatcaagt tgttattttc aaccaaacat gccatcccta
     5581 aagccagtgc tcagagctag agtgggtaat gaggcttttc ttacagaaaa tcatcgcagc
     5641 aacattacct ggtgtttggt gattttactt atatgtgtcc tgtaccagtg ttcacacttg
     5701 tgattctgag gtcagtgttg tctacctgag tggtatggtt atctgaattc cataggaact
     5761 ttgcaccagt tagaacttag tggattcttt gctgcttttt ttggcgctgg aagggtggac
     5821 ataccgtgtg gatgttagta atcagtacca gaaattacca taggactttt atcctgactg
     5881 cccaccatat caatggagtg ctttttgtct gggttaatag tactggtttt gatacataat
     5941 cacttgttat atttgtttaa aattttccac tttcttagta atagtcagct tcagtcggtg
     6001 cttaggaata aacatgttga agtttttgca gtatgtaggg cagaggtcag tgaatgtatt
     6061 tgcttggctt cgaatgtaag attgaatcaa ttttatagtg aatcaaattg gaagagattg
     6121 gtaaaaggcg ttttagtaat attggaactt tcgggggagc ccaggactat gagaagaatt
     6181 tcttcacatt ttcagtatct gtaaggtacc aaaggactgc gacgaattga tcctttaacg
     6241 gagatgcttt gaaaccagat ccataactga gtctatcaag atacagcagc taaagtcggg
     6301 gaataacctc aggcaaaaac tgcacatctt taagatttct ggcattcttt taagtatttg
     6361 gtcatcatag ctgccccgta cagtagtctc tgacctctga atcactcatc acccttgggc
     6421 ccctgttgcc ttacttaaaa tattgtacct tgttcagcct acctcacagg gctgttgtga
     6481 ggagtgtagt gaaatggact cctatgtgaa ctgggtggtt ttcactaaga atggctgtgt
     6541 ttgaatactt ataaatgctg tgtagtttga aaaagcatgt tcttaagttg gtataactgg
     6601 tgattttatt tttttaaagt aagaccttca aaatgtcctt tagaatcagt ttactttgcg
     6661 catgactgtt tctatattcc tcatcaactg cacttttacg agttgtaagg tctactgcag
     6721 tgttcatgtg tagaggggaa acctagagta agcgaatggc ttcagctcct tttccaccag
     6781 gagtttgcac ttgcaaactg gtaccccatg cagagtgaat ttggctgaaa taacttttcc
     6841 aacaaccaag tagttcaaca atttattgcc tttgacaaat attcatcaac tttattgaat
     6901 tgtacctttt attaaaaaag aaacatttcg aaaccttgtt ctgcatcagc ctgtatcagt
     6961 tatcatctgt ctgcacatag tggtgttgct ccagatggat gtattaaatg gtttgcaagt
     7021 tatcctactc cgcaggactt tggtatgttt gttatctgga catgactttg ctacacagtt
     7081 gtgataataa aaattacagc tcctcaggtc taacctctaa gttgtgtatg aaaactatta
     7141 ataagcgaca cgtggtatat tcagtgctgc aagagtttga aatgagcaca ctgcctcatt
     7201 tccttacaaa caagacaaag ccttctaaat gattttttta actttaaaaa tggttattca
     7261 aagtgtagtg acttgtatgt tgaaatgatt gtatgttctg tataaaatgt cccactgagg
     7321 tttttacaaa agcacctgta ttatcccttc taaaaattaa accctttttt tgctttc
//
