LOCUS       XM_039096933            1267 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus FERM domain containing 1 (Frmd1),
            mRNA.
ACCESSION   XM_039096933
VERSION     XM_039096933.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1267
                     /gene="Frmd1"
                     /note="FERM domain containing 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 46% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:689709"
                     /db_xref="RGD:1588779"
     CDS             1..1110
                     /gene="Frmd1"
                     /codon_start=1
                     /product="FERM domain-containing protein 1"
                     /protein_id="XP_038952861.1"
                     /db_xref="GeneID:689709"
                     /db_xref="RGD:1588779"
                     /translation="MTSDAVQCRGAANALLLAEDTAGRIDVCTRCHAEAVHCLFGEAV
                     DKACLWESPCMVFNRNNSWDLEMNSELRDILVLLPSWEQLRLSVQVAATGQDLFQQVC
                     DMAHIREAHLFGLSVLRENEYVFVDLKQKLSKYFSKDWKTDTHKGDKRPRAPFIAFFR
                     VQFYVENGKAIRDKTALHLYYCHLKEQVLRSRCMRREEAYFLLAAYGLQADLGNQQES
                     VHVGRYFEPHAYFPQWIINKRGIDYILRHVPAMHREQQGLTAKEAIRRFIRDACQLED
                     VPAHFFRMYKEKKEDESTVLLGLTLKGVTIYQGKKLEIQPEGLLATQKLLLYTGHAWR
                     SRYLLQLLRSTHQLHLSLKPVLQWLQQLEEAESGY"
ORIGIN      
        1 atgacttctg atgctgtaca gtgtagaggt gctgccaatg ctcttctcct ggctgaagac
       61 acagctggaa gaatagatgt ctgtacccgc tgccacgctg aagctgtcca ctgccttttt
      121 ggggaggcag tagacaaagc ttgcctttgg gagagccctt gtatggtgtt caacagaaac
      181 aacagctggg acctggagat gaactcggag cttagagaca tcctggtact actcccttcc
      241 tgggaacaac tgcggctgtc agtgcaggtc gcagccacag gacaagacct cttccagcag
      301 gtgtgtgata tggcacacat cagagaagct catttgtttg gcctcagtgt gctcagagaa
      361 aatgagtatg tgtttgtgga cttgaagcaa aagctcagca agtacttctc gaaggactgg
      421 aagacagaca cacacaaagg ggataaaaga cccagggcac cctttatcgc cttcttcaga
      481 gtgcagttct acgtggaaaa cgggaaggca atacgtgaca agacagccct acacctgtac
      541 tactgccacc tgaaggaaca ggtactgagg tccaggtgca tgcgcagaga ggaggcctac
      601 tttctgctgg ctgcctatgg gttacaggct gacctgggca accaacagga gtcagtccat
      661 gtgggcaggt acttcgagcc acacgcctat ttcccacagt ggattatcaa caagagagga
      721 attgattata tcctaaggca tgtgcctgcc atgcaccgtg aacagcaggg cctcactgca
      781 aaggaggcaa tacgacgctt catcagggat gcttgccaac ttgaggatgt tcccgcccac
      841 ttcttcagga tgtacaagga aaagaaagag gatgaatcta ctgttctcct gggactcact
      901 ctgaagggag tgaccatcta tcaggggaag aagctggaaa tccagccaga agggctgttg
      961 gcaacacaga agctgctgct ctacacaggt catgcctggc gttctcgcta cctgctgcaa
     1021 ttgcttcgtt ccacccacca gctccacctc agcttgaagc ctgtgctgca gtggctgcag
     1081 cagctggagg aggcagaaag tgggtattag atccacctgg gcccgggcac ctagctgatg
     1141 gccacacaca ccctctctag gctctgatga tgtagcatat caacctttga ggaaccactc
     1201 ctgtgattga ctggctgtgc tgtgctgggc atacagggcc ataccttctg ttgccaatca
     1261 tcatggc
//
