LOCUS       XM_039092591            1278 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus FSHD region gene 2 (Frg2), transcript
            variant X2, mRNA.
ACCESSION   XM_039092591
VERSION     XM_039092591.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1278
                     /gene="Frg2"
                     /note="FSHD region gene 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 6 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:685524"
                     /db_xref="RGD:1592623"
     CDS             211..912
                     /gene="Frg2"
                     /codon_start=1
                     /product="protein FRG2-like"
                     /protein_id="XP_038948519.1"
                     /db_xref="GeneID:685524"
                     /db_xref="RGD:1592623"
                     /translation="MDSETSHPDPSCQTLDPPTGPQSTVDERTSESEPNKNERTPSQS
                     DSNSSNHTEESTQKEAPRKRKHSSRDSSQVRTGSEGSSHGKKRHKTSETKAEPRANGH
                     QDGLSHRPQHTDPLPIRKNLVSFLREKSEEIYRDTVQMQAQQHGSLLSPEQLSQLSQL
                     SGSLTAVVHTFYSMATQAGFAFPAEGWLIPGTMPAPQELSGKEPQSPLVEGGEKTTDS
                     ASPSSPDKTSPEPRP"
ORIGIN      
        1 gaccaaaccc agggccttgc gcttcctagg taagcgctct accactgagc taaatcccca
       61 gccccaagtc tttctaatat agatctcttt catctatgtg gaaagagatt cattttgtaa
      121 cttctgttac tatagagaac cctgacaaat ataataacca taattccttc tgttcatgga
      181 agagagaaag ccttgcagtt caacctgagc atggattcag aaacctccca tccagaccct
      241 tcttgtcaaa cactggaccc ccctactggg ccacagagca ccgttgatga aaggacatca
      301 gaatcagaac caaataaaaa tgagcggacc cccagtcaat cagacagcaa ttccagtaac
      361 cacactgaag aatcaactca gaaggaagca cccaggaaga ggaaacactc ttccagggac
      421 tccagccagg tcaggacagg aagcgagggc agctcccatg ggaaaaagag acacaagact
      481 tcggaaacaa aggctgagcc aagagccaat ggacaccaag atggattatc ccatcgccct
      541 cagcacacag acccattacc aattcggaag aacctggtga gctttctgcg ggagaagtct
      601 gaggagattt atagagacac agtccagatg caggcccagc agcatggttc cctgctcagc
      661 cctgagcagc tctctcagct cagccagctc tcaggttctc tgactgccgt ggtgcacacg
      721 ttctacagca tggccaccca agcaggcttt gccttccctg ctgagggctg gcttatccca
      781 ggcaccatgc ctgcccctca ggagctgtct ggcaaggaac ctcagagtcc tttggtggag
      841 ggaggagaga agaccacaga ctctgccagc ccatcaagtc ctgacaagac aagtcctgag
      901 ccaagaccat gagtccctca gagcagagtc acactctggg acaataaagg accactccac
      961 ctccctgtct ccactgcctg gggcgctcgc cctctctgtg agaacatgta gcaggtgcat
     1021 cagtgaagag tttgaagtgt ttactcagga tcatgaactg tgtttcactg ggatctagga
     1081 ctcacaattg agccttgctt cctttggata ttttgctcaa gtgtgtgttg gacttgtgta
     1141 cttatattgt agaaagttgc aaataaatat tgatttaaca gaaaattctg tagttcttca
     1201 gccttttcat ttagtctgag aagggtgggt gcccaaatat cttggagtat attccctgta
     1261 ggtcataatc agccttcc
//
