LOCUS       XM_001070964             913 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus FSHD region gene 1-like 1 (Frg1l1),
            mRNA.
ACCESSION   XM_001070964
VERSION     XM_001070964.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001070964.7.
            
            On Jan 21, 2021 this sequence version replaced XM_001070964.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..913
                     /gene="Frg1l1"
                     /note="FSHD region gene 1-like 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2 long
                     SRA reads, 8 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:689484"
                     /db_xref="RGD:1592278"
     CDS             62..838
                     /gene="Frg1l1"
                     /codon_start=1
                     /product="protein FRG1"
                     /protein_id="XP_001070964.1"
                     /db_xref="GeneID:689484"
                     /db_xref="RGD:1592278"
                     /translation="MAEYSYVKSTKLVLKGTKAKSKKKKSKDKKRKREEDEEAQLDIV
                     GIWWTVSNFGEISGTIAIEMDKGAYIHALDNGLFTLGAPHREVDEGSSPPEQFTAVKL
                     SDSRIALKSGYGKYLGINSDGLVVGRSDAIGPREQWEPVFQDGKMALLASNSCFIRCN
                     EAGDIEAKNKTAGEEEMIKIRSCAEREAKKKDDIAEEDKGSVQQCEINYVKKFQSFQD
                     HKLKISKEDSKILKKARKDGFLHETLLDRRAKLKADRYCK"
ORIGIN      
        1 acttcctcct cccggaccta cgggatctct accggcggtc gctatttcag ggtgccgaac
       61 catggccgaa tattcttacg taaagtccac caaactcgtg ctcaagggca ctaaagccaa
      121 gagtaaaaag aaaaagagca aagataagaa gagaaaacga gaagaagacg aggaagcgca
      181 acttgacatt gtgggaatct ggtggactgt atccaatttc ggtgagattt caggaaccat
      241 tgccattgaa atggataaag gagcctatat ccatgcactg gacaatggcc tctttacact
      301 gggagcgcca cacagagaag tcgatgaggg ctccagtcct ccagagcagt ttactgccgt
      361 taaattgtct gattccagaa ttgccctgaa gtctggctat ggaaaatatc tcggtataaa
      421 ttcagatgga cttgttgttg ggcgttcaga tgcaattggg ccaagagaac aatgggaacc
      481 agtgtttcaa gatgggaaga tggctttact ggcctcaaat agctgcttta ttagatgtaa
      541 tgaagcaggc gatatagaag caaagaataa aacagcagga gaagaagaaa tgataaagat
      601 cagatcctgt gcggaaagag aagccaagaa gaaggacgac atcgcagagg aagacaaggg
      661 aagcgtgcag cagtgtgaga tcaactatgt aaagaaattt cagagcttcc aagaccataa
      721 actcaaaata agcaaagaag atagtaaaat tcttaaaaag gctcggaaag atggattttt
      781 gcacgagacc cttctggaca ggagagccaa attgaaagcc gaccgatatt gcaagtgacg
      841 tggacattgt gtgttgcttt ggggattttt tctgtttctt ttttttttcc tgaataaaaa
      901 tatttggtgt aaa
//
