LOCUS       NM_022858               2634 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus forkhead box Q1 (Foxq1), mRNA.
ACCESSION   NM_022858 XM_214474
VERSION     NM_022858.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Hong,H.K., Noveroske,J.K., Headon,D.J., Liu,T., Sy,M.S.,
            Justice,M.J. and Chakravarti,A.
  TITLE     The winged helix/forkhead transcription factor Foxq1 regulates
            differentiation of hair in satin mice
  JOURNAL   Genesis 29 (4), 163-171 (2001)
   PUBMED   11309849
REFERENCE   2  (bases 1 to 2634)
  AUTHORS   Hoggatt,A.M., Kriegel,A.M., Smith,A.F. and Herring,B.P.
  TITLE     Hepatocyte nuclear factor-3 homologue 1 (HFH-1) represses
            transcription of smooth muscle-specific genes
  JOURNAL   J Biol Chem 275 (40), 31162-31170 (2000)
   PUBMED   10896677
REFERENCE   3  (bases 1 to 2634)
  AUTHORS   Clevidence,D.E., Overdier,D.G., Tao,W., Qian,X., Pani,L., Lai,E.
            and Costa,R.H.
  TITLE     Identification of nine tissue-specific transcription factors of the
            hepatocyte nuclear factor 3/forkhead DNA-binding-domain family
  JOURNAL   Proc Natl Acad Sci U S A 90 (9), 3948-3952 (1993)
   PUBMED   7683413
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On May 9, 2012 this sequence version replaced NM_022858.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC161861.1, L13201.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2634              JAXUCZ010000017.1  33121454-33124087   c
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p12"
     gene            1..2634
                     /gene="Foxq1"
                     /gene_synonym="Hfh-1; Hfh1"
                     /note="forkhead box Q1"
                     /db_xref="GeneID:64826"
                     /db_xref="RGD:621572"
     exon            1..2634
                     /gene="Foxq1"
                     /gene_synonym="Hfh-1; Hfh1"
                     /inference="alignment:Splign:2.1.0"
     CDS             567..1769
                     /gene="Foxq1"
                     /gene_synonym="Hfh-1; Hfh1"
                     /note="HNF-3/forkhead-like protein 1; hepatocyte nuclear
                     factor 3 forkhead homolog 1; HNF-3/forkhead homolog-1"
                     /codon_start=1
                     /product="forkhead box protein Q1"
                     /protein_id="NP_074049.2"
                     /db_xref="GeneID:64826"
                     /db_xref="RGD:621572"
                     /translation="MKLEVFAPRAAHGDKMGSDLEGAGSSDVPSPLSAAGDDSLGSDG
                     DCAANSPAAGRGAVDLEGGGGERNSSGGASTQDDPEVTDGSRTQASPVGPCAGSVGGG
                     EGARSKPYTRRPKPPYSYIALIAMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTGWR
                     NSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADGVFRRRRKRLSHRTTV
                     SASGLRPEEAPPGPAGTPQPAPTAGSSPIARSPARQEEGSSPASKFSSSFAIDSILSK
                     PFRSRRDGDPALGVQLPWSAAPCPPLRAYPALLPASSGGALLPLCAYGAGEPTLLASR
                     GAEVQPAAPLLLAPLSTAAPAKPFRGPETAGAAHLYCPLRLPTALQAAAACGPGPHLS
                     YRVETLLA"
ORIGIN      
        1 ccggccagcg ctgacatgct gccggggagg ccagaggtgg caaggcggct gcgggtgcgg
       61 cggcctcgga gactcctttc tatgggctct cgaggctgaa gacgtcttat cctcaaaagt
      121 agcgggtgcc ccatcagagg tcagctcggt gtctaagacc tagacatcca gcgaaggaac
      181 acttttggac gcctggacgg agagcagatg cgctggctct ttcctcccag cacgaaattc
      241 taaggcttgc gtgtcctggc ccccgcttcg cagggtggcc cctcattcct cgcttgtctt
      301 ccgcccaaag tctccaaacc tcggagtaag gacagcattg caccaacttc tactactcca
      361 ctcctcagtt cactcaacac tcacaacccc tccaaagaaa cattccagcg gaggacaacc
      421 ttacggaaaa gcgtctctct ccgaaagacg caggagcggt ccttcctggg agaagatagc
      481 ctgagcgggc cacgggatcg ccactcgctt cctacgacct cgcaggaaag gggtaatagc
      541 gccggacggg aagcaccaga gccggcatga aattggaggt atttgcccca cgcgcagccc
      601 acggggacaa gatgggcagt gacctggagg gggccggcag cagcgacgtg ccatctccgc
      661 tgtccgcggc tggcgacgac tccttaggct ctgacgggga ctgtgcagcc aacagcccgg
      721 cggcgggcag aggcgccgtg gatctggaag gcggcggcgg cgagaggaat tcgagtggcg
      781 gggcgagcac ccaagacgat cccgaggtga ccgatggcag cagaacgcag gcctccccgg
      841 tggggccgtg cgcgggcagc gtgggcggcg gtgagggcgc gcgcagcaag ccgtacacgc
      901 ggcggcccaa gcccccctac tcctacatcg cactcatcgc catggccatc cgcgactccg
      961 cgggcggacg cctgacgctg gccgagatca acgagtacct catgggcaag ttcccctttt
     1021 tccggggcag ctacacgggc tggcgcaact ccgtgcgcca caacctctcg ctcaacgact
     1081 gtttcgtcaa ggtgctgcgc gacccctcgc ggccctgggg caaggacaat tactggatgc
     1141 tcaaccccaa cagcgaatac accttcgccg acggggtctt ccgccgccgc cgcaagcgcc
     1201 tcagccaccg gaccacagtc tccgcatcgg ggctacggcc ggaggaagcc ccacccggac
     1261 ctgcggggac cccgcagccc gcgcccaccg ccggctcctc cccaatcgcg cgctcgcccg
     1321 ctcgccagga ggagggctcc agcccggcga gcaagttctc cagctccttc gccatcgaca
     1381 gcatcctcag caagccgttt cgcagccgcc gcgacggcga cccggctctg ggggtgcagc
     1441 taccctggag cgctgctccc tgcccgccgc tgcgcgccta tcccgcgctc cttcccgcgt
     1501 cgtccggcgg tgccctgctg ccgctctgtg cttacggcgc gggcgagccc acgctgctgg
     1561 cgtcgcgcgg ggccgaggtg cagcccgcgg cgcccctgtt gctggcgccc ctctccaccg
     1621 cggccccagc caagccattt cgaggtccgg agaccgccgg cgcggcgcac ctgtactgcc
     1681 ccctacggct gcccacggcc ctgcaggcgg ccgcggcctg cggtccgggt ccgcacctgt
     1741 cctaccgggt ggagacgctg ctagcttgac aggagcttgg agctctgctg gtgggtctag
     1801 ggtggagttg ggagcacctt ttgtcatgga gggcaccttt tgtcatggag gttggaatgc
     1861 gggctccagg gctgtgcact ttccaccttc cccgaggaat agagattttt ttttcaactc
     1921 tccatcaaat gtgccttaaa gttaagcatt ttgtcccaag tgttttaact tagtccagaa
     1981 tagttccttt gtcttttcta actttacaga ggatcaaagc tgttcttttc tatttcatgg
     2041 ccaggcctgt actctcccgc aaagaggctt tcctctccct cctattgtgt tgcaccttct
     2101 gctgattttt cttccccacc cacgaaaaaa gaaaaaaaga aaaaaaaatg aacatcaggg
     2161 aaccattcca tggggataaa tggtgactac tgtttggggt tttgagactc cgctgggtgt
     2221 aaatgtgtgt ctttcacagg agtgactgcg tgtgagagag ctgtcaatct tccagtcatt
     2281 ttctctgcta tcaaccaatg cttcactgtg ccaaaaacaa ggggaaatgt tgttgggttt
     2341 ttgtaattaa attatttata tatttttgaa acctgaattg aaatgttgca ggcaacggct
     2401 acagctttat tagtggttac ctaactgtgg tcttcttggg ccgagcaatt tctttaaagg
     2461 aaaagttaac atatgtttgt ggggtgccag ggccaccacc acgtgaaacc aagtgtgatt
     2521 tttattttaa tattatttgt gtctgtatat atattcgtgt ataaatttta tgaagcccag
     2581 gcatactact tgtttttttt tttttaataa aattcacaat tgatctacaa aaca
//
