LOCUS       NM_001105776            2319 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus forkhead box I1 (Foxi1), mRNA.
ACCESSION   NM_001105776 XM_001065917 XM_220287
VERSION     NM_001105776.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Vidarsson H, Westergren R, Heglind M, Blomqvist SR, Breton S and
            Enerback S.
  TITLE     The forkhead transcription factor Foxi1 is a master regulator of
            vacuolar H-ATPase proton pump subunits in the inner ear, kidney and
            epididymis
  JOURNAL   PLoS One 4 (2), e4471 (2009)
   PUBMED   19214237
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Kurth I, Hentschke M, Hentschke S, Borgmeyer U, Gal A and Hubner
            CA.
  TITLE     The forkhead transcription factor Foxi1 directly activates the AE4
            promoter
  JOURNAL   Biochem J 393 (Pt 1), 277-283 (2006)
   PUBMED   16159312
REFERENCE   3  (bases 1 to 2319)
  AUTHORS   Hulander M, Kiernan AE, Blomqvist SR, Carlsson P, Samuelsson EJ,
            Johansson BR, Steel KP and Enerback S.
  TITLE     Lack of pendrin expression leads to deafness and expansion of the
            endolymphatic compartment in inner ears of Foxi1 null mutant mice
  JOURNAL   Development 130 (9), 2013-2025 (2003)
   PUBMED   12642503
REFERENCE   4  (bases 1 to 2319)
  AUTHORS   Clevidence DE, Overdier DG, Peterson RS, Porcella A, Ye H, Paulson
            KE and Costa RH.
  TITLE     Members of the HNF-3/forkhead family of transcription factors
            exhibit distinct cellular expression patterns in lung and regulate
            the surfactant protein B promoter
  JOURNAL   Dev Biol 166 (1), 195-209 (1994)
   PUBMED   7958446
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_220287.3, XM_001065917.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..2319
                     /gene="Foxi1"
                     /note="forkhead box I1"
                     /db_xref="GeneID:287185"
                     /db_xref="RGD:1307421"
     exon            1..625
                     /gene="Foxi1"
                     /inference="alignment:Splign:2.1.0"
     CDS             70..1188
                     /gene="Foxi1"
                     /codon_start=1
                     /product="forkhead box protein I1"
                     /protein_id="NP_001099246.1"
                     /db_xref="GeneID:287185"
                     /db_xref="RGD:1307421"
                     /translation="MSSFDLPAPSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGMPSP
                     QRPTSFEGGGEYGATPNPYLWLNGTAMTPPPYLPGTNASPFLPQAYGMQRQLLPSELG
                     WLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDQRLTLSQIYQYVADNFPFYNKSKAG
                     WQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDASS
                     STGSLASEKTENRLLSSSPKPTEPQEVLDTASPDTTSSSPEKRSSPAPSGTPCLNNFL
                     STMTAYVNGTNPISRSAATPGLSPEPVDKMGQNSLNFNSYTPLTNLSSHGNGGEWANP
                     VPTNALGYGGPVFNQFSPHFYNSINTNSILFPREGTEV"
     exon            626..2319
                     /gene="Foxi1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaacacctg tcaggggcag ctccagagag cacaggtgaa gccggtggct agcccaaccc
       61 tgatccagca tgagctcctt cgacctcccg gcgccctcgc cacctcgatg cagcccccag
      121 ttccccagca tcggccagga gccccccgag atgaatcttt actatgagaa cttcttccac
      181 cctcagggca tgcccagtcc tcagcgcccc acctccttcg aaggtggtgg cgagtacggg
      241 gccaccccca acccctacct ctggctcaat gggacagcca tgaccccacc accctacctg
      301 cccggcacta acgccagccc cttcttaccc caggcctacg gcatgcagag gcagctattg
      361 cccagtgagc tgggctggct gcccatcccc tctcaggagg agctcatgaa gctggtgcgc
      421 ccaccatatt cctactctgc gcttattgct atggcaatcc acggtgctcc tgaccagcgt
      481 ctcacactga gccagatcta ccagtacgtg gccgacaact tcccctttta caacaagagc
      541 aaagctggct ggcagaactc catccgccac aacctgtcac tcaacgactg cttcaagaag
      601 gtgccccgag atgaggacga cccaggcaaa gggaattact ggactctgga ccccaactgt
      661 gagaagatgt ttgacaacgg aaacttccgc cggaagagga agagaaaatc agatgcatcc
      721 tccagcaccg gctccttggc ttctgagaaa acggagaaca ggctcctgtc cagcagcccc
      781 aagcccacag agcctcagga ggtcttagac actgcctcac cagacaccac cagcagctcc
      841 ccagagaagc ggtcctcccc tgctccctca ggcaccccgt gtctcaacaa cttcctctct
      901 accatgacag cctatgtgaa tgggacaaac cccattagcc gctcagcagc cacaccagga
      961 ctgagcccgg agcctgttga caagatgggg cagaactcac tgaatttcaa ctcctacacc
     1021 ccccttacca acctcagtag ccatgggaat gggggtgaat gggccaaccc ggtacccacc
     1081 aatgctctgg gctatggagg ccctgtcttc aaccagttca gtccacattt ctacaatagc
     1141 atcaacacca acagtatcct cttccccagg gaaggcactg aagtctagag atagaacaac
     1201 ttctggtcta cagagctctc tggggttggt ggggggaggg agcaatggtg gtccttcaga
     1261 ccagatccct ctcccacccc aagatcagag acatttgaac ttcccagata gcaccacagg
     1321 aagcttggaa gaatctgtct tctttctaag caccgttcta gccttcctgg ttctctacac
     1381 agatttgatc gtgaatctac acggatttga taactaaagt gggcgtacca ggaccagctt
     1441 gccattaatg atgtgtccat ttgttgaaca cttattatgt gctggttcct gtcttgggct
     1501 ttttaatgac acagtcacac catgtacccc aagaggttca ctcgatcctc tccagttgac
     1561 agatcataaa acaaaggccc aagaaagttg tcagcttttc cagggtcatg aaaatgacaa
     1621 agaaaggcat taaagcagaa gctgggtaac cctcggaggc tggataaaag gaagcgggat
     1681 tgtatgaact ggatgagtgt cgccataaaa agctggttat ggtaaacaca cacacacact
     1741 tcccactggc ttctagtgac cccctcagaa ttcaacacca atttggccat gacatatctc
     1801 cccctttttc ttcttgcccc agcttcccag cccaagtacc cctgtaggac aatacctcta
     1861 gtaggagcaa tatagggtat cgcttcagta gcctttcaca gaacttgaac agagccagag
     1921 gtcagtgaga aaagtggtat gtacccctga accccccact agtactgccc acccacaaaa
     1981 atctcataaa caccagcttc ctgtgtgtat gtgtcatgga ccagtgaata ggatgtggct
     2041 cagccttcca agagaaacaa ggccagagga gcagaataag catgtccttt tttatagccc
     2101 tggagaggtg gatacttgtc tgagagaaca atggcctgga gggaggggtc ctctgcctgt
     2161 gctcgcttgg agggcagagt ggctgttagc acagcctctg gcactgctct ctcttctttt
     2221 tgtgacttac tttatatgct gtgatgtcat atcacagaac accctgagaa gtgttgtttg
     2281 gtttccttgt tttcttttta attaaaaaga aaaagaaag
//
