LOCUS       NM_001399203            2724 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus forkhead box D2 (Foxd2), mRNA.
ACCESSION   NM_001399203 XM_233422
VERSION     NM_001399203.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Jolma,A., Yan,J., Whitington,T., Toivonen,J., Nitta,K.R.,
            Rastas,P., Morgunova,E., Enge,M., Taipale,M., Wei,G., Palin,K.,
            Vaquerizas,J.M., Vincentelli,R., Luscombe,N.M., Hughes,T.R.,
            Lemaire,P., Ukkonen,E., Kivioja,T. and Taipale,J.
  TITLE     DNA-binding specificities of human transcription factors
  JOURNAL   Cell 152 (1-2), 327-339 (2013)
   PUBMED   23332764
REFERENCE   2  (bases 1 to 2724)
  AUTHORS   Johansson,C.C., Dahle,M.K., Blomqvist,S.R., Gronning,L.M.,
            Aandahl,E.M., Enerback,S. and Tasken,K.
  TITLE     A winged helix forkhead (FOXD2) tunes sensitivity to cAMP in T
            lymphocytes through regulation of cAMP-dependent protein kinase
            RIalpha
  JOURNAL   J Biol Chem 278 (19), 17573-17579 (2003)
   PUBMED   12621056
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jan 4, 2022 this sequence version replaced XM_233422.10.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2724              JAXUCZ010000005.1  133664760-133667483 c
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q35"
     gene            1..2724
                     /gene="Foxd2"
                     /note="forkhead box D2"
                     /db_xref="GeneID:313504"
                     /db_xref="RGD:1304642"
     exon            1..2724
                     /gene="Foxd2"
                     /inference="alignment:Splign:2.1.0"
     CDS             206..1690
                     /gene="Foxd2"
                     /codon_start=1
                     /product="forkhead box protein D2"
                     /protein_id="NP_001386132.1"
                     /db_xref="GeneID:313504"
                     /db_xref="RGD:1304642"
                     /translation="MTLGSCCCEIMSSESSPAALSEPDADIDVVGGGSGGGELTARSG
                     PRAPRDVLPHGHELPPEEAEADVAEDEEESGGCSDCEPRALGPRGAAAAAGSPGPGVQ
                     AARGATGPGPGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEF
                     ISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNG
                     SFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLSGFAAYGAYGYGYGL
                     ALPAYGAPPPGPAPHPHPHPHAFAFAATAPCQLSVPPGRAAAPPPGPPTASVFASATS
                     APAPAPAPGSGPSPAGLPAFLGAELGCAKAFYPASLSPPAAGTAATLSSALLRQGLKT
                     DAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGSGDGSPGSPFAAAAGPGGQAQV
                     LAMLTAPALTPVAGHIRLSHPGDSLLSSGPSFASKVAGLSGCHF"
ORIGIN      
        1 ggggcagcac tggttgggtg cgccctgcac agtgaaagtc caggagtctc aacaccaggg
       61 ggcgctgagg agctagggga catcccctcc ctgtcctccg ccccctcccc gcccgcgcgc
      121 aaaacactgg tcggagaggc agcacggtgg agccggagcc gcgggccgag cggagccgga
      181 gagcggcgga ggcggcggcg gcaccatgac cctgggcagc tgctgttgcg agatcatgtc
      241 ctccgagagc tccccggccg cgctgtccga gcccgacgca gatatagacg tggtgggcgg
      301 cggcagcggt gggggggagc tcacagcccg ctccgggccc cgcgcccctc gggacgtgct
      361 cccgcacggc cacgagcttc ccccggagga agccgaggcg gacgtggctg aggacgagga
      421 agagtcggga ggctgctcgg actgcgagcc ccgcgctcta gggccccggg gggcggcggc
      481 cgcagcggga agccccgggc cgggcgtgca ggcagcccga ggcgcaacgg ggccggggcc
      541 ggggccggga cccgggccgc cgtcgggggg cgcggcgaca cggagccctc tggtaaaacc
      601 accttattcg tacattgcgc tcatcaccat ggccatcctg cagagcccca agaagcgcct
      661 gacgctgagc gagatctgcg agttcatcag cggccgcttc ccctactacc gggagaagtt
      721 ccccgcctgg cagaacagca tccgccacaa cctctccctc aacgactgct tcgttaagat
      781 cccccgcgag ccgggcaacc cgggcaaggg caactactgg acgctcgacc cggagtcggc
      841 cgatatgttc gacaacggca gcttcctgcg gcgccgcaag cgcttcaagc ggcagcctct
      901 gccgccgccg catccacacc cgcatcctca cccggagctg ctactgcgtg gcggggctgc
      961 cgcggccggg gaccctggcg ccttcctctc gggcttcgcc gcttacggcg cctacggcta
     1021 cggctacggg ctggcgctcc cggcctacgg cgcacctcca ccgggcccgg cccctcaccc
     1081 gcatccacac ccgcacgcct tcgcctttgc tgccaccgcg ccttgccagc tgtcagttcc
     1141 cccgggccgc gccgctgcgc ctccaccggg acctccgacg gcgtcggtat tcgccagcgc
     1201 gacctcggcg cccgcccctg cgcctgcccc gggatctggc ccgagccccg cagggctccc
     1261 tgcttttcta ggcgcagagc tgggttgcgc caaggctttc taccccgcgt ccctgagtcc
     1321 tcccgcagct ggcacagcgg ccaccctgtc ctctgcgctc ctgcgtcagg gcctcaagac
     1381 ggacgccggc ggtggtgcgg gtggcggggg cgcaggggca ggccagaggc cctccttctc
     1441 tatagaccac atcatgggcc atggtggtgg cggggccgca ccaccgggca gcggcgacgg
     1501 ttctccagga tctcctttcg cggcagccgc aggtcctggg ggtcaagccc aagtcttggc
     1561 tatgctgact gccccggctc tgactccggt ggctggccat atccgcctct cacacccagg
     1621 ggactcactc ctatcatcag ggccctcgtt tgccagcaaa gtcgccggcc tcagtggctg
     1681 ccacttttga ccgcactggg ggctcggggt cagttaggcc ctcactcctt aacctctctg
     1741 gggagctcgg ccggtcccag cggaattcag ggagtctatt tatgaagagt ctccagacct
     1801 aggccgtcac gcgtgatcag gcacttcagc tgcaagctca gaatgtcacc ggcagttggg
     1861 acgaagcggg ctccgggctc ccctcgccta cgcaataggt ttaaagtgga gattcctttt
     1921 ctgtttgagc agcaaaaagg agagcaggaa ccttctctgt ttcttgcctc tgcgcctctc
     1981 acagtcggag aagaaggctt tggcagagat acgcctgtcg gttgttggat ctcgccagaa
     2041 tcacctatgg cttgaaaaat ccaccgcccc attccttcct caactttgag actcgcttat
     2101 ccaatattat aatttaaaga catctgttat ctgctttgtg cttaagagaa aatttcatat
     2161 tttttggttc cttttgctat tcttaaagga agctggttcc ctccaagcct aaggcagggt
     2221 ttatacagtc gggaagctaa gagaagtgaa acggggggtc tccacaatct ttgaagaaat
     2281 cgcaaagcca attcccccga ggaaaatgtt ttctctttgg tgtttggctg ttttttaagg
     2341 agccctcttt ggcttttccc gtggtccata ggcccagcaa tccagggcta gcggtcctct
     2401 gggccttctt ctctgtccca ggccctgtga tatttattgt agttaaaggc aatgagattg
     2461 ggtgggagaa gagggtctgg agaggtggga attgggtggg caagggcaca gagctctggc
     2521 agcgggtcct atagttatgt gtaaatatct gtacagcggg ctgacccctt cccccgcatt
     2581 ctctgtccac tggtgtgcat tgatttagac ttctccactt agcggagact ctgtgaaatc
     2641 gtctgatggt ctgtgtggaa gaaaaaaaaa ctgtctccct cttcctcttc attggtgtct
     2701 attgaataaa tgtatgtgaa ctta
//
