LOCUS       NM_001107717            3577 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus fibronectin type III domain containing 7 (Fndc7),
            mRNA.
ACCESSION   NM_001107717 XM_001072055 XM_227591
VERSION     NM_001107717.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001107717.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.592554.1,
                                           SRR26360190.3095119.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-367               JAXUCZ010000002.1  199225417-199225783 c
            368-386             JAXUCZ010000002.1  199224917-199224935 c
            387-641             JAXUCZ010000002.1  199217740-199217994 c
            642-902             JAXUCZ010000002.1  199216398-199216658 c
            903-1160            JAXUCZ010000002.1  199211729-199211986 c
            1161-1415           JAXUCZ010000002.1  199207618-199207872 c
            1416-1673           JAXUCZ010000002.1  199205989-199206246 c
            1674-1928           JAXUCZ010000002.1  199204550-199204804 c
            1929-2183           JAXUCZ010000002.1  199202694-199202948 c
            2184-2444           JAXUCZ010000002.1  199198485-199198745 c
            2445-2474           JAXUCZ010000002.1  199194443-199194472 c
            2475-2536           JAXUCZ010000002.1  199191673-199191734 c
            2537-3577           JAXUCZ010000002.1  199190549-199191589 c
FEATURES             Location/Qualifiers
     source          1..3577
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..3577
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /note="fibronectin type III domain containing 7"
                     /db_xref="GeneID:310787"
                     /db_xref="RGD:1309189"
     exon            1..367
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     CDS             305..2518
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /note="fibronectin type III domain-containing protein 7"
                     /codon_start=1
                     /product="fibronectin type III domain-containing protein 7
                     precursor"
                     /protein_id="NP_001101187.1"
                     /db_xref="GeneID:310787"
                     /db_xref="RGD:1309189"
                     /translation="MAGRPEKHLPLIRFTLLCLKMVISSKTAPEIPTIDQAYSKISNS
                     ITVEWTTVPGATSYLLTAEDGDTTIETTVANSPGTVTGLKAATLYQITIRSVSASGRS
                     PASPPKQAKTVLAAPILEVSSPSPDSILVSWDAVYMAIGFSVSVMQANGLGRIWKENT
                     TNTSLTFSSLDAGTLYTIKAYAWNANGIPGDDSTRNQRTSPRAPANIQVFFDSGALKA
                     SVSWTPSEGAFNYTVVAWSGSSQRSCSTALSSCSIGSLQCGTEYLISVSANNDAGCSK
                     SSSAPTLKTVACAPGRVMIQEEPPGHLSVAWSNVELGDYYVAFVKSDDGLEVHCNTSL
                     TQCNFLSECGFTYFISVFAYNKAGQSPLGDVFNYTTAPCCPSDISPVLVSSDRVEIAW
                     SPVRGAELYETKAIAGYSVVACNDTAPACTLSALDCDTKYNVTVYSFSEVRGSNLSCS
                     SHFITTAPCSPEIKNISKDAFSMINVHWRSTNEGATYTVTAQGKKGLFRCSSTGETCR
                     MGGLPCGSVFSVTAVAETQAGKSLPSYSVPLETVPCCPAGLTAAQVTQSIINVSWTIG
                     AVAQTYVTVLESYIGQSKCHTHQNHCLLGCIACGINYTVALKAISPTGLTADCAYQSY
                     SSSVCCPLGVKLYRLGPNGIRIYWQASRGSANYSTDLYGSKGIFTCAPHTGLSFCDIT
                     NIPCGDVYTVMVSPVAETGLKLTFCPKKIYSVTCSGSTLGMVIYRGKRNDTVSPR"
     exon            368..386
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            387..641
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            642..902
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            903..1160
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            1161..1415
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            1416..1673
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            1674..1928
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            1929..2183
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            2184..2444
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            2445..2474
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            2475..2536
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
     exon            2537..3577
                     /gene="Fndc7"
                     /gene_synonym="RGD1309189"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcattgtact tcgttccttg aaaccaaggt tacaggagct tctttggccg gcttcgcttg
       61 actttcccag actctttttt tttttttttc cttttcagtc tttgcagtac ctgtcccctc
      121 cagtccccag tgcccctagt tacaggtaag tgctggcgct ctccaaggaa aggcaacttc
      181 cggtgtttgt ttccaactct gtgaccactt cattctacag ctttcagtgc tgtgcttctg
      241 ggagccaaat aggattcagt tccccgctgt gttgtgctgc tgcgtgaggg ctgtggctaa
      301 caagatggct ggaagacccg agaagcattt gcctttgatc agattcactc tcctctgttt
      361 gaaaatggtt atttcatcga aaacagctcc tgaaatacca actattgatc aggcatattc
      421 gaagatcagc aatagcatca ccgtagaatg gactaccgtg ccaggcgcca caagttacct
      481 gctcacggct gaagatgggg acacaaccat tgagaccaca gtggccaatt ccccgggcac
      541 tgtgacaggc ctgaaggctg cgaccttata ccaaatcacc atcagatctg tcagtgcctc
      601 tggacgtagc ccagcatcac ctccgaagca ggcaaagaca gtgttggctg ccccaattct
      661 ggaagttagc tctccaagtc cagactccat ccttgtgagc tgggacgccg tatacatggc
      721 gatcggattc tccgtgtctg ttatgcaagc caatggcttg ggtagaattt ggaaagagaa
      781 taccacaaac acctccctga ccttcagcag tttggacgcc gggactctct acaccataaa
      841 ggcctatgcg tggaacgcca acggaatccc cggggatgac tccacccgca atcagagaac
      901 cagtcctcgt gcccctgcca acattcaagt cttctttgac agcggggccc taaaggcttc
      961 tgtttcatgg accccgtcag aaggagcatt caactacact gtggtggcat ggagcggttc
     1021 ttcccagcgg agctgcagca cagctctcag ctcctgtagc atcggttcct tgcagtgtgg
     1081 aacagagtac ctgatttctg tctcagcaaa caacgatgct gggtgcagca agtcctcctc
     1141 tgcacccacc ctgaagactg ttgcttgtgc acctggacgg gtgatgatcc aggaagagcc
     1201 ccctggtcac ttgtctgtgg cttggtccaa tgtggagctg ggtgactact atgtggcatt
     1261 tgtgaagagc gatgacggct tggaggtaca ttgcaatacc tcccttaccc agtgcaactt
     1321 cttgtccgag tgtggcttca cgtacttcat tagtgtgttt gcctacaaca aggcagggca
     1381 gagtcctctg ggcgacgtat tcaattacac cacagctcct tgttgtccta gtgacattag
     1441 cccagtgttg gtgtccagtg acagggtgga gattgcctgg tctcctgtgc gtggtgctga
     1501 actctatgaa accaaggcca tagctggata cagcgttgtg gcgtgcaacg acactgctcc
     1561 tgcttgcact ctctctgctt tggattgtga caccaagtac aatgtcacag tgtattcctt
     1621 cagtgaggtc cggggcagca atctgtcatg ctcttcccac tttatcacaa cagctccttg
     1681 cagtcctgaa ataaaaaata tttcgaagga tgcattctct atgatcaatg tgcactggcg
     1741 gtcgactaat gaaggagcca cttacacagt gacggcccag gggaagaagg ggttgttccg
     1801 gtgcagcagc acaggggaga cctgcaggat ggggggcctg ccctgcggct ccgtgttctc
     1861 tgtcactgct gtggccgaaa ctcaggcagg aaagagccta cccagctaca gtgtgcccct
     1921 ggagacagtg ccctgctgtc cagctggtct gacagcagct caggtcaccc agtctataat
     1981 caacgtgagc tggaccattg gggcagtggc tcaaacctat gtgacagtgc tggagtcata
     2041 catcggacag tctaagtgcc acacccatca aaaccactgc cttctaggat gcatcgcgtg
     2101 tggcatcaac tacacggtgg cattaaaagc cattagtccc acaggactga ccgcagactg
     2161 tgcctaccag agttattctt ctagtgtctg ttgcccactg ggggtcaaat tatataggct
     2221 gggccctaat ggcattcgga tctactggca agcctccagg ggctctgcca attatagcac
     2281 cgacctctat ggctccaagg gcatctttac atgtgcccca cacactggtc taagtttctg
     2341 tgacatcacc aacatcccct gtggggacgt atacaccgtg atggtctcac ccgttgctga
     2401 aacaggactg aagcttactt tctgcccaaa aaaaatatat tcagttacct gttctggaag
     2461 tacacttggg atggtgattt acagagggaa gaggaacgat acagtaagcc ccaggtaaaa
     2521 gcagacactc cacaagagtc cctgcgctgt tagtgagcag ctatggaaac ttgctattag
     2581 aacacaaaac acccatagga taggaaaagc tcctttgtcc tttaaaggag taactcagac
     2641 tctgttttga ggggacaagg tcaagtgtgt catcagctac agagacgttc gagatgagct
     2701 atgaagagga ctccacggag gaatggtcca gagagtccac tggacagtcg ccagactgag
     2761 tcagcactgc cacagcctga agcataaagg caatgcttag cagaaatttg ttccaaggct
     2821 tcatatctag acacaccata gaaggtcgcc tgtcccaaac ccatgtagcc caggcttgtc
     2881 ttgaagtctc aatccctctg cctcagccct ccaaagtgct caggatacag gcatccacca
     2941 ttctgcccca tcgcagattt taatatgtcc tgatcatgag tctctcaaca gcttagcata
     3001 cagcatgctc tccgcaggac ggaagtgctc cccccactgc agtcaagcca tcctccggag
     3061 gacagcattc acccctacac aggcctttgt tggggttttt aagctggagt ctagagcagc
     3121 tgctgctagg gccacgtcag taacaaacgc cttccacaca ggtttctggg gaagccaagc
     3181 tccctgcaga cttcactgag tcagagagtg ccatgtgaac agacatctgc cagagcctct
     3241 gggaaggcag agctgtaggt ctgtggctgg aaaggctgcc atcacgctct ctgagtgagc
     3301 gaagatgtca gggggagcag cagccaaggg caaggagtct cagactgcgg cagggtctct
     3361 ctctctctct ctctctctct ctctctctct ctctctctcc ctccttccct ccctcccccc
     3421 tctctttcac acacacacac acacacacac acacacacac acacacacac acacacacac
     3481 acacacagtc tttcattgac cttatagcct gttctctgct cacattgtaa tggcttcttt
     3541 ccatgattgg agagggaaaa tagtgaaaca taacata
//
