LOCUS       NM_001191704            3682 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus fibronectin type III domain containing 3B
            (Fndc3b), mRNA.
ACCESSION   NM_001191704 XM_226988
VERSION     NM_001191704.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3682)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   2  (bases 1 to 3682)
  AUTHORS   Kishimoto,K., Nishizuka,M., Ueda,T., Kajita,K., Ugawa,S.,
            Shimada,S., Osada,S. and Imagawa,M.
  TITLE     Indispensable role of factor for adipocyte differentiation 104
            (fad104) in lung maturation
  JOURNAL   Exp Cell Res 317 (15), 2110-2123 (2011)
   PUBMED   21704616
REFERENCE   3  (bases 1 to 3682)
  AUTHORS   Kishimoto,K., Kato,A., Osada,S., Nishizuka,M. and Imagawa,M.
  TITLE     Fad104, a positive regulator of adipogenesis, negatively regulates
            osteoblast differentiation
  JOURNAL   Biochem Biophys Res Commun 397 (2), 187-191 (2010)
   PUBMED   20493170
REFERENCE   4  (bases 1 to 3682)
  AUTHORS   Nishizuka,M., Kishimoto,K., Kato,A., Ikawa,M., Okabe,M., Sato,R.,
            Niida,H., Nakanishi,M., Osada,S. and Imagawa,M.
  TITLE     Disruption of the novel gene fad104 causes rapid postnatal death
            and attenuation of cell proliferation, adhesion, spreading and
            migration
  JOURNAL   Exp Cell Res 315 (5), 809-819 (2009)
   PUBMED   19138685
REFERENCE   5  (bases 1 to 3682)
  AUTHORS   Tominaga,K., Kondo,C., Johmura,Y., Nishizuka,M. and Imagawa,M.
  TITLE     The novel gene fad104, containing a fibronectin type III domain,
            has a significant role in adipogenesis
  JOURNAL   FEBS Lett 577 (1-2), 49-54 (2004)
   PUBMED   15527760
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jul 17, 2010 this sequence version replaced XM_226988.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.7674.1,
                                           SRR22582424.692450.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-111               JAXUCZ010000002.1  112476311-112476421 c
            112-187             JAXUCZ010000002.1  112454634-112454709 c
            188-264             JAXUCZ010000002.1  112378994-112379070 c
            265-508             JAXUCZ010000002.1  112364565-112364808 c
            509-799             JAXUCZ010000002.1  112360793-112361083 c
            800-858             JAXUCZ010000002.1  112327932-112327990 c
            859-1010            JAXUCZ010000002.1  112322451-112322602 c
            1011-1070           JAXUCZ010000002.1  112319751-112319810 c
            1071-1209           JAXUCZ010000002.1  112310285-112310423 c
            1210-1263           JAXUCZ010000002.1  112307473-112307526 c
            1264-1388           JAXUCZ010000002.1  112291068-112291192 c
            1389-1563           JAXUCZ010000002.1  112289805-112289979 c
            1564-1650           JAXUCZ010000002.1  112288243-112288329 c
            1651-1789           JAXUCZ010000002.1  112286624-112286762 c
            1790-1861           JAXUCZ010000002.1  112284611-112284682 c
            1862-1980           JAXUCZ010000002.1  112282451-112282569 c
            1981-2086           JAXUCZ010000002.1  112280692-112280797 c
            2087-2259           JAXUCZ010000002.1  112279300-112279472 c
            2260-2373           JAXUCZ010000002.1  112277602-112277715 c
            2374-2523           JAXUCZ010000002.1  112277149-112277298 c
            2524-2804           JAXUCZ010000002.1  112273839-112274119 c
            2805-3017           JAXUCZ010000002.1  112263421-112263633 c
            3018-3184           JAXUCZ010000002.1  112251586-112251752 c
            3185-3312           JAXUCZ010000002.1  112249024-112249151 c
            3313-3682           JAXUCZ010000002.1  112243202-112243571 c
FEATURES             Location/Qualifiers
     source          1..3682
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q24"
     gene            1..3682
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /note="fibronectin type III domain containing 3B"
                     /db_xref="GeneID:294925"
                     /db_xref="RGD:1311673"
     CDS             1..3624
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /codon_start=1
                     /product="fibronectin type III domain-containing protein
                     3B"
                     /protein_id="NP_001178633.1"
                     /db_xref="GeneID:294925"
                     /db_xref="RGD:1311673"
                     /translation="MYVTMMMTDQIPLELPPLLNGEVAMMPHLVNGEAAQQVILVQVN
                     PGETFTIRAEDGTLQCIQGPAEVPMMSPNGSIPPIHVPPGYISQVIEDSTGVRRVVVT
                     PQSPECYPPSYPSAMSPTHHLPPYLTHHPHFIQNSHTAYYPPVTVPGDMPPQFFPQPH
                     LPPTIYSEQEIIPLYGMSSYITREDQYSKPPHKKLKDRQIDRQNRLNSPPSTIYKNSC
                     ATMYNGYGKGHSGGSSGGGGGGSGGGPGIKKTERRARSSPKSSDSDLQEYELEVRRVQ
                     DILSGIEKPQVSNIQARAVVLSWAPPVGLPCGPHGGLSFPYSYEVALSDKGRDGKYKI
                     IYSGEELECNLKDLRPATDYHVRVYAMYNSVKGSCSEPVSFTTHSCAPECPFPPKLAH
                     RSKSSLTLQWKAPIDNGSKITSYLLEWDEGKRNSGFRQCFFGGQKHCKLTKLCPAMGY
                     TFRLAARNDIGTSGYSQEVVCYTLGNIPQMPSAPRLVRAGVTWITLQWSRPEGCSPEE
                     VITYTLDIQEDENDNHFHPRYTGEDLTCTVKNLKRSTQYKFRLTASNTEGKSCPSEVL
                     VCTTSPDRPGPPTRPLLKGPVTSHGFSVKWDAPKDNGGSEILKYLLEITDGASEAGQW
                     EVAYSGSATEYVFTHLKPGTLYKLRACCIGTGGHSQCSESLPVRTLSLAPGQCRPPRV
                     LGRPKHKEVHLEWDVPASEGGCEVSEYSVEMTEPEEVASEVYHGPELECTVGNLLPGT
                     VYRFRVRALNDGGYGPYSDVSEITTAAGPPGQCRAPCVSFTPDGCVLVGWESPESPGA
                     DISEFRLEWGEDEESLELIYHGPDTCFEIRDLLPAAQYCCRLQAFNPAGAGPYSELVH
                     CQTPASAPDPVSTLCVLEEEPLSAHLDSPSVCLVLTWEEPCSNGSEIIAYNIDLGDTC
                     ITVGNTTTHVLKNLLPETTYRIRIQAVNDIGDGPFSQFIKAKTRPLPPSPPRLECAAS
                     GPQSLKLKWGDSNSKIHAAHDMVYTLQLEDRNKRFISIYRGPSHTYKVQRLTEFTCYS
                     FRIQATSEAGEGPFSDTYTFSTTKSVPPTLKAPRVTQLEGNSCEIFWETVPPMKGDPV
                     NYVLQVLVGRESEYKQVYKGEEATFQISGLQSNTDYRFRVCACRRCVDTSQELSGAFS
                     PSAAFVLQQREVLLTGDLGGMDDAKMKGVMPTDEQFAALIVLGFATLSILFAFILQYF
                     LMK"
     exon            1..111
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            112..187
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            188..264
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            265..508
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            509..799
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            800..858
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            859..1010
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1011..1070
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1071..1209
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1210..1263
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1264..1388
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1389..1563
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1564..1650
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1651..1789
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1790..1861
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1862..1980
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            1981..2086
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            2087..2259
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            2260..2373
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            2374..2523
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            2524..2804
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            2805..3017
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            3018..3184
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            3185..3312
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
     exon            3313..3682
                     /gene="Fndc3b"
                     /gene_synonym="RGD1311673"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtacgtca ccatgatgat gaccgaccag atccccctgg aactgccacc cctgctcaat
       61 ggggaggtgg ccatgatgcc ccacttggtg aacggagaag cagctcagca ggtcattctt
      121 gtccaagtca acccaggtga gacctttaca atcagagccg aggatgggac acttcagtgc
      181 atccaaggac ctgccgaagt ccccatgatg tcacccaatg ggtccatccc tcctatccat
      241 gtgcccccag gttacatctc acaggtgatt gaagacagca ccggagtccg ccgggtggtg
      301 gtcacaccgc agtctcccga gtgttaccca ccgagctacc cctcagccat gtctccaacc
      361 catcacctgc ccccttatct gacccaccat ccacacttca tccagaactc gcacaccgcc
      421 tactacccgc ctgtcaccgt gcctggagat atgccacccc agtttttccc ccagcctcac
      481 cttcctccca caatatatag tgagcaagaa atcatccctc tgtatggaat gtcgagctac
      541 atcacccgag aagaccagta cagcaaacca ccacacaaga aactgaagga ccgccagatt
      601 gaccgccaga atcgcctcaa cagcccgcct tccaccatct acaagaacag ctgtgccacc
      661 atgtacaacg gctatgggaa gggccacagt ggaggcagca gtggaggtgg gggaggtggc
      721 agcggtggcg gacctgggat caagaagaca gagcgaagag caagaagcag ccccaaatcc
      781 agtgattctg acttgcaaga gtatgagttg gaagtaagga gggtgcagga catcctttcg
      841 ggaatagaga aaccacaggt gtctaatatc caggcaagag cagtggtgct atcttgggca
      901 ccccctgtcg gactgccctg tggaccccat ggtggtcttt ccttccctta cagctatgag
      961 gttgctttat ctgacaaagg gcgagatggg aaatacaaga tcatttacag tggagaagaa
     1021 ttggagtgta acctgaaaga cctcaggcct gccacggatt accacgtgag ggtatacgcc
     1081 atgtacaatt ctgtcaaggg atcctgctcc gagccagtca gcttcaccac ccacagctgc
     1141 gcaccagaat gtcccttccc tcccaagctg gcacacagga gcaaaagttc actaaccttg
     1201 cagtggaagg ctccaattga caatggttca aaaatcacca gctacctttt agaatgggat
     1261 gagggaaaga ggaacagtgg attcagacag tgtttctttg ggggccagaa gcactgcaag
     1321 ttgaccaagc tgtgtccagc catgggctac acattcaggc tcgctgctcg gaatgacatc
     1381 ggcaccagtg gttacagcca ggaggtcgtg tgctacacat tgggaaacat cccccagatg
     1441 ccttcagcac cccggctggt ccgagctggc gtcacctgga tcacactgca gtggagcagg
     1501 ccggaaggct gctcgcctga ggaagtgatt acctacaccc tggacattca ggaggacgag
     1561 aacgataacc atttccaccc aagatacact ggagaggacc taacctgtac tgtgaaaaac
     1621 ctcaagcgca gcacacagta taaattcagg ctgactgctt ctaatacgga agggaagagc
     1681 tgtccgagtg aagtcctggt ttgtacaacc agccccgaca gacctggacc tcccaccaga
     1741 cccctcctca aaggacccgt cacgtcgcat ggcttcagtg tcaagtggga tgctccaaag
     1801 gacaacggtg gctcagaaat cctgaagtat ctgctggaga tcacggacgg tgcttctgaa
     1861 gctggtcagt gggaagtggc ctacagtgga tcagctacag agtatgtctt tacccatttg
     1921 aaaccaggca ctttgtacaa actgcgagca tgctgcatcg gtaccggtgg gcacagtcag
     1981 tgctctgaaa gtctccctgt tcgcacacta agccttgcac caggtcagtg ccgaccaccg
     2041 agggttttgg gtagaccaaa gcacaaagaa gtccacttag agtgggatgt gcctgcgtct
     2101 gaaggtggct gcgaggtctc agagtacagt gtagaaatga cggaacctga ggaggtagcc
     2161 tcagaggtgt accacgggcc cgagctggag tgcaccgttg gcaacctgct tcccgggacg
     2221 gtgtaccgct tcagagtgcg ggctctgaat gacggagggt atggtcccta ctctgatgtg
     2281 tcagagatca ccactgccgc aggaccgcct gggcagtgca gggcaccgtg tgtttccttc
     2341 acgcctgatg gatgcgtcct ggtgggttgg gagagccctg aaagccctgg tgctgacatc
     2401 tccgagttca ggttggagtg gggagaagac gaggaatcct tagaactcat ttatcacggg
     2461 ccagacacct gctttgagat ccgagatctg ttgcctgctg cacagtattg ctgcagactc
     2521 caggccttca atccagcagg cgcagggcca tatagtgagc tcgtccactg ccagacacca
     2581 gcctctgccc ccgaccctgt ctccactctg tgtgtcctgg aggaggagcc cctcagtgcc
     2641 cacctggact caccctctgt gtgccttgta ctgacctggg aagagccgtg cagtaatgga
     2701 tctgaaatca ttgcttacaa cattgatctg ggagacacct gcattactgt gggcaatact
     2761 accacacatg tgttgaagaa cctccttccc gaaactacat accggatcag aattcaggct
     2821 gtcaatgata ttggagatgg accgtttagt cagttcatca aagcaaagac tcggccatta
     2881 ccaccctcgc ctcctaggct ggagtgtgct gcgtctggtc ctcagagcct gaagctcaag
     2941 tggggagaca gtaactctaa gatacatgct gctcatgaca tggtgtacac cctgcagttg
     3001 gaagacagga acaagaggtt tatctcaatc taccgaggac ccagccacac ctacaaggtc
     3061 cagagactga cagagtttac ctgctactcc ttcaggatcc aggcaaccag cgaggcaggg
     3121 gaggggcctt tctcagacac ctacaccttc agtacaacca aaagtgtccc tcccaccctc
     3181 aaagcacctc gagtgacgca gttggaagga aattcctgtg aaatcttctg ggagacggta
     3241 ccaccgatga agggcgaccc tgtgaactac gttctgcagg tgttggttgg aagagaatct
     3301 gaatacaagc aggtgtacaa gggagaagaa gccacattcc aaatctcagg cctgcagagc
     3361 aacacagatt acaggttccg cgtgtgtgcc tgccgccgct gtgtggacac gtctcaggag
     3421 ctcagcggcg ctttcagccc ctctgcggct ttcgtgttac aacagcgtga ggtcttgctt
     3481 acgggggacc tgggaggcat ggacgatgcc aagatgaagg gcgtgatgcc taccgatgaa
     3541 cagtttgccg ccctcattgt gcttggcttc gcaaccctgt ccatcttgtt tgcctttata
     3601 ttacagtact tcctaatgaa gtaaatccag cgaccagagg gatgcgccga atgccgcaca
     3661 ctttaataca catttactca ga
//
